MC06g0770 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g0770
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionEmbryo defective
LocationMC06: 6396495 .. 6396605 (-)
RNA-Seq ExpressionMC06g0770
SyntenyMC06g0770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGGAGAAGTATTGGGAAGATCACCCTGGAGAAGCTGTACCTTTAATGAAACCAAAGTTTTATTATGGACCCTGGAGGGTAATGAGGGGAGAAGTACCCGCACACACAAAG

mRNA sequence

CAGGAGAAGTATTGGGAAGATCACCCTGGAGAAGCTGTACCTTTAATGAAACCAAAGTTTTATTATGGACCCTGGAGGGTAATGAGGGGAGAAGTACCCGCACACACAAAG

Coding sequence (CDS)

CAGGAGAAGTATTGGGAAGATCACCCTGGAGAAGCTGTACCTTTAATGAAACCAAAGTTTTATTATGGACCCTGGAGGGTAATGAGGGGAGAAGTACCCGCACACACAAAG

Protein sequence

QEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
Homology
BLAST of MC06g0770 vs. ExPASy Swiss-Prot
Match: Q94K18 (Uncharacterized protein At4g29660 OS=Arabidopsis thaliana OX=3702 GN=EMB2752 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.2e-09
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0

Query: 1  QEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPA 35
          +EK+WE+HPG+ VPLMKP FY GPWRV RGE  A
Sbjct: 64 KEKFWEEHPGKTVPLMKPVFYRGPWRVYRGEAIA 97

BLAST of MC06g0770 vs. NCBI nr
Match: XP_022147559.1 (uncharacterized protein At4g29660 [Momordica charantia])

HSP 1 Score: 87.8 bits (216), Expect = 3.08e-21
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 0

Query: 1  QEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 37
          +EKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 97

BLAST of MC06g0770 vs. NCBI nr
Match: XP_038878275.1 (uncharacterized protein At4g29660 [Benincasa hispida])

HSP 1 Score: 87.8 bits (216), Expect = 3.08e-21
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 0

Query: 1  QEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 37
          +EKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 97

BLAST of MC06g0770 vs. NCBI nr
Match: XP_022961093.1 (uncharacterized protein At4g29660 [Cucurbita moschata] >XP_022987918.1 uncharacterized protein At4g29660 [Cucurbita maxima] >XP_023516486.1 uncharacterized protein At4g29660 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 85.5 bits (210), Expect = 2.53e-20
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 1  QEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 37
          +EKYWEDHPGE VPLMKPKFYYGPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEDVPLMKPKFYYGPWRVMRGEVPAHTK 97

BLAST of MC06g0770 vs. NCBI nr
Match: XP_004135707.1 (uncharacterized protein At4g29660 [Cucumis sativus] >KGN66231.1 hypothetical protein Csa_007483 [Cucumis sativus])

HSP 1 Score: 84.3 bits (207), Expect = 7.23e-20
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 1  QEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 37
          +EKYWEDHPGEAVPLMKPKFY GPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97

BLAST of MC06g0770 vs. NCBI nr
Match: XP_008450847.1 (PREDICTED: uncharacterized protein At4g29660 [Cucumis melo])

HSP 1 Score: 84.3 bits (207), Expect = 7.23e-20
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 1  QEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 37
          +EKYWEDHPGEAVPLMKPKFY GPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97

BLAST of MC06g0770 vs. ExPASy TrEMBL
Match: A0A6J1D1D0 (uncharacterized protein At4g29660 OS=Momordica charantia OX=3673 GN=LOC111016456 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.49e-21
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 0

Query: 1  QEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 37
          +EKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 97

BLAST of MC06g0770 vs. ExPASy TrEMBL
Match: A0A6J1JKR6 (uncharacterized protein At4g29660 OS=Cucurbita maxima OX=3661 GN=LOC111485319 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.22e-20
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 1  QEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 37
          +EKYWEDHPGE VPLMKPKFYYGPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEDVPLMKPKFYYGPWRVMRGEVPAHTK 97

BLAST of MC06g0770 vs. ExPASy TrEMBL
Match: A0A6J1HAW0 (uncharacterized protein At4g29660 OS=Cucurbita moschata OX=3662 GN=LOC111461707 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.22e-20
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 1  QEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 37
          +EKYWEDHPGE VPLMKPKFYYGPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEDVPLMKPKFYYGPWRVMRGEVPAHTK 97

BLAST of MC06g0770 vs. ExPASy TrEMBL
Match: A0A0A0M1X3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587420 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.50e-20
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 1  QEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 37
          +EKYWEDHPGEAVPLMKPKFY GPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97

BLAST of MC06g0770 vs. ExPASy TrEMBL
Match: A0A1S3BPK6 (uncharacterized protein At4g29660 OS=Cucumis melo OX=3656 GN=LOC103492316 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.50e-20
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 1  QEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 37
          +EKYWEDHPGEAVPLMKPKFY GPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97

BLAST of MC06g0770 vs. TAIR 10
Match: AT4G29660.1 (embryo defective 2752 )

HSP 1 Score: 60.1 bits (144), Expect = 4.4e-10
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0

Query: 1  QEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPA 35
          +EK+WE+HPG+ VPLMKP FY GPWRV RGE  A
Sbjct: 64 KEKFWEEHPGKTVPLMKPVFYRGPWRVYRGEAIA 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q94K186.2e-0970.59Uncharacterized protein At4g29660 OS=Arabidopsis thaliana OX=3702 GN=EMB2752 PE=... [more]
Match NameE-valueIdentityDescription
XP_022147559.13.08e-2197.30uncharacterized protein At4g29660 [Momordica charantia][more]
XP_038878275.13.08e-2197.30uncharacterized protein At4g29660 [Benincasa hispida][more]
XP_022961093.12.53e-2094.59uncharacterized protein At4g29660 [Cucurbita moschata] >XP_022987918.1 uncharact... [more]
XP_004135707.17.23e-2094.59uncharacterized protein At4g29660 [Cucumis sativus] >KGN66231.1 hypothetical pro... [more]
XP_008450847.17.23e-2094.59PREDICTED: uncharacterized protein At4g29660 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A6J1D1D01.49e-2197.30uncharacterized protein At4g29660 OS=Momordica charantia OX=3673 GN=LOC111016456... [more]
A0A6J1JKR61.22e-2094.59uncharacterized protein At4g29660 OS=Cucurbita maxima OX=3661 GN=LOC111485319 PE... [more]
A0A6J1HAW01.22e-2094.59uncharacterized protein At4g29660 OS=Cucurbita moschata OX=3662 GN=LOC111461707 ... [more]
A0A0A0M1X33.50e-2094.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587420 PE=4 SV=1[more]
A0A1S3BPK63.50e-2094.59uncharacterized protein At4g29660 OS=Cucumis melo OX=3656 GN=LOC103492316 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT4G29660.14.4e-1070.59embryo defective 2752 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g0770.1MC06g0770.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane