MC06g0634 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0634
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC06: 5186649 .. 5187020 (-)
RNA-Seq Expression	MC06g0634
Synteny	MC06g0634

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTAATCTCCTCACTTTCCACCCCGCCGGCATCCGTGCATGTGCCGCTCCCGGCGACCGACGCTCCGACCAGAATCGCCGGAGAACCGCCGCCTCCTCATCCTCGAACTGGTGGGCCCCGGTCTTCGGCTGGTCCTCCGAGCCCGACTACATCGACTCCGGCAGCAAGGAGCTCGCCGGCGGGAGCTCAAAATCAGATCCGGAACCGAAATCGGCGAGTACTCGATTTTCCCCCGGCTGCTTCACGGAGGCGAAGGCGCGGCAGCTCCGGATGATGACGACCGAAACGGAGTCGTTTCACGATGTCATGTACCACTCGGCGATCGCATCCCGCCTCGCGTCGGACTTCAAAACTCGCGCCGATTCC

mRNA sequence

ATGGCGACTAATCTCCTCACTTTCCACCCCGCCGGCATCCGTGCATGTGCCGCTCCCGGCGACCGACGCTCCGACCAGAATCGCCGGAGAACCGCCGCCTCCTCATCCTCGAACTGGTGGGCCCCGGTCTTCGGCTGGTCCTCCGAGCCCGACTACATCGACTCCGGCAGCAAGGAGCTCGCCGGCGGGAGCTCAAAATCAGATCCGGAACCGAAATCGGCGAGTACTCGATTTTCCCCCGGCTGCTTCACGGAGGCGAAGGCGCGGCAGCTCCGGATGATGACGACCGAAACGGAGTCGTTTCACGATGTCATGTACCACTCGGCGATCGCATCCCGCCTCGCGTCGGACTTCAAAACTCGCGCCGATTCC

Coding sequence (CDS)

ATGGCGACTAATCTCCTCACTTTCCACCCCGCCGGCATCCGTGCATGTGCCGCTCCCGGCGACCGACGCTCCGACCAGAATCGCCGGAGAACCGCCGCCTCCTCATCCTCGAACTGGTGGGCCCCGGTCTTCGGCTGGTCCTCCGAGCCCGACTACATCGACTCCGGCAGCAAGGAGCTCGCCGGCGGGAGCTCAAAATCAGATCCGGAACCGAAATCGGCGAGTACTCGATTTTCCCCCGGCTGCTTCACGGAGGCGAAGGCGCGGCAGCTCCGGATGATGACGACCGAAACGGAGTCGTTTCACGATGTCATGTACCACTCGGCGATCGCATCCCGCCTCGCGTCGGACTTCAAAACTCGCGCCGATTCC

Protein sequence

MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWAPVFGWSSEPDYIDSGSKELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASDFKTRADS

Homology

[Close]

BLAST of MC06g0634 vs. NCBI nr
Match: XP_038880363.1 (uncharacterized protein LOC120072011 [Benincasa hispida])

HSP 1 Score: 207 bits (528), Expect = 7.92e-67
Identity = 109/128 (85.16%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 1   MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWAPVFGWSSEPDYIDSGSK-- 60
           MATNLLTF PAGIRACAA  DRRSD NRR+T  SSSSNWWAPVFGWSSEPDYIDS +K  
Sbjct: 1   MATNLLTFPPAGIRACAASADRRSDHNRRKT--SSSSNWWAPVFGWSSEPDYIDSANKAE 60

Query: 61  --ELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLAS 120
             +LAGG SKSDPE KS   RFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLAS
Sbjct: 61  PQDLAGGVSKSDPETKSVRARFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLAS 120

Query: 121 DFKTRADS 124
           DFKTRADS
Sbjct: 121 DFKTRADS 126

[Close]

BLAST of MC06g0634 vs. NCBI nr
Match: XP_011656185.1 (uncharacterized protein LOC105435656 [Cucumis sativus] >KGN65295.1 hypothetical protein Csa_019984 [Cucumis sativus])

HSP 1 Score: 198 bits (503), Expect = 5.13e-63
Identity = 105/128 (82.03%), Postives = 110/128 (85.94%), Query Frame = 0


Query: 1   MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWAPVFGWSSEPDYIDSGSK-- 60
           MATNLLTF PAGIRACA+  DRRSD +RR+T  SSSSNWWAPVFGWSSEPDYIDSG+K  
Sbjct: 1   MATNLLTFPPAGIRACASSADRRSDHSRRKT--SSSSNWWAPVFGWSSEPDYIDSGNKAE 60

Query: 61  --ELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLAS 120
              LAGGSSK D E KS   RFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLAS
Sbjct: 61  PQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLAS 120

Query: 121 DFKTRADS 124
           DFK+R DS
Sbjct: 121 DFKSREDS 126

[Close]

BLAST of MC06g0634 vs. NCBI nr
Match: XP_016903293.1 (PREDICTED: uncharacterized protein LOC103502747 [Cucumis melo] >KAA0046733.1 uncharacterized protein E6C27_scaffold216G00140 [Cucumis melo var. makuwa] >TYK14510.1 uncharacterized protein E5676_scaffold15G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 192 bits (487), Expect = 1.45e-60
Identity = 102/129 (79.07%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 1   MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWAPVFGWSSEPDYIDSGSKE- 60
           MATNLLTF PAGIRACAA  DRRSD NRR+  ASSS+NWWAPVFGWSSEPDYIDS + + 
Sbjct: 1   MATNLLTFTPAGIRACAASADRRSDLNRRK--ASSSTNWWAPVFGWSSEPDYIDSAANKA 60

Query: 61  ----LAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLA 120
               LAG +SK D E KS   RFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLA
Sbjct: 61  EPQNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLA 120

Query: 121 SDFKTRADS 124
           SDFK+R DS
Sbjct: 121 SDFKSRGDS 127

[Close]

BLAST of MC06g0634 vs. NCBI nr
Match: KAG6589876.1 (hypothetical protein SDJN03_15299, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023547.1 hypothetical protein SDJN02_14573, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 180 bits (457), Expect = 5.08e-56
Identity = 96/129 (74.42%), Postives = 107/129 (82.95%), Query Frame = 0


Query: 1   MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSS-NWWAPVFGWSSEPDYIDSGSKE 60
           MAT+L TF P  IRACA+     +D NRR+T++SSSS NWWAPVFGWSSEPDYIDSG+K 
Sbjct: 1   MATSLFTFAPTSIRACASS----ADHNRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKS 60

Query: 61  ----LAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLA 120
               LA G SKSDPE KSA  RFSPGCFTE+KARQLR+MT ETESFHDVMYHSAIASRLA
Sbjct: 61  NPKNLADGVSKSDPETKSARNRFSPGCFTESKARQLRLMTMETESFHDVMYHSAIASRLA 120

Query: 121 SDFKTRADS 124
           +DFK+RADS
Sbjct: 121 TDFKSRADS 125

[Close]

BLAST of MC06g0634 vs. NCBI nr
Match: XP_022960569.1 (uncharacterized protein LOC111461308 [Cucurbita moschata])

HSP 1 Score: 177 bits (450), Expect = 6.11e-55
Identity = 94/130 (72.31%), Postives = 106/130 (81.54%), Query Frame = 0


Query: 1   MATNLLTFHPAGIRACAAPGDRRSDQNRRR--TAASSSSNWWAPVFGWSSEPDYIDSGSK 60
           MATNL TF P  IRACA+     +D NRR+  +++SSSSNWWAPVFGWSSEPDYIDSG+K
Sbjct: 1   MATNLFTFAPTSIRACASS----ADHNRRKASSSSSSSSNWWAPVFGWSSEPDYIDSGNK 60

Query: 61  E----LAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRL 120
                LA G SKSDPE KS+  RFSPGCFTE+KARQLR+MT ETESFHDVMYHSAIASRL
Sbjct: 61  SNPKNLADGVSKSDPETKSSRNRFSPGCFTESKARQLRLMTMETESFHDVMYHSAIASRL 120

Query: 121 ASDFKTRADS 124
           A+DFK+R DS
Sbjct: 121 ATDFKSRGDS 126

[Close]

BLAST of MC06g0634 vs. ExPASy TrEMBL
Match: A0A0A0LTN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G303705 PE=4 SV=1)

HSP 1 Score: 198 bits (503), Expect = 2.48e-63
Identity = 105/128 (82.03%), Postives = 110/128 (85.94%), Query Frame = 0


Query: 1   MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWAPVFGWSSEPDYIDSGSK-- 60
           MATNLLTF PAGIRACA+  DRRSD +RR+T  SSSSNWWAPVFGWSSEPDYIDSG+K  
Sbjct: 1   MATNLLTFPPAGIRACASSADRRSDHSRRKT--SSSSNWWAPVFGWSSEPDYIDSGNKAE 60

Query: 61  --ELAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLAS 120
              LAGGSSK D E KS   RFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLAS
Sbjct: 61  PQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLAS 120

Query: 121 DFKTRADS 124
           DFK+R DS
Sbjct: 121 DFKSREDS 126

[Close]

BLAST of MC06g0634 vs. ExPASy TrEMBL
Match: A0A5D3CSV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00250 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 7.04e-61
Identity = 102/129 (79.07%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 1   MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWAPVFGWSSEPDYIDSGSKE- 60
           MATNLLTF PAGIRACAA  DRRSD NRR+  ASSS+NWWAPVFGWSSEPDYIDS + + 
Sbjct: 1   MATNLLTFTPAGIRACAASADRRSDLNRRK--ASSSTNWWAPVFGWSSEPDYIDSAANKA 60

Query: 61  ----LAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLA 120
               LAG +SK D E KS   RFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLA
Sbjct: 61  EPQNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLA 120

Query: 121 SDFKTRADS 124
           SDFK+R DS
Sbjct: 121 SDFKSRGDS 127

[Close]

BLAST of MC06g0634 vs. ExPASy TrEMBL
Match: A0A1S4E4Y4 (uncharacterized protein LOC103502747 OS=Cucumis melo OX=3656 GN=LOC103502747 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 7.04e-61
Identity = 102/129 (79.07%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 1   MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWAPVFGWSSEPDYIDSGSKE- 60
           MATNLLTF PAGIRACAA  DRRSD NRR+  ASSS+NWWAPVFGWSSEPDYIDS + + 
Sbjct: 1   MATNLLTFTPAGIRACAASADRRSDLNRRK--ASSSTNWWAPVFGWSSEPDYIDSAANKA 60

Query: 61  ----LAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLA 120
               LAG +SK D E KS   RFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLA
Sbjct: 61  EPQNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLA 120

Query: 121 SDFKTRADS 124
           SDFK+R DS
Sbjct: 121 SDFKSRGDS 127

[Close]

BLAST of MC06g0634 vs. ExPASy TrEMBL
Match: A0A6J1HBD8 (uncharacterized protein LOC111461308 OS=Cucurbita moschata OX=3662 GN=LOC111461308 PE=4 SV=1)

HSP 1 Score: 177 bits (450), Expect = 2.96e-55
Identity = 94/130 (72.31%), Postives = 106/130 (81.54%), Query Frame = 0


Query: 1   MATNLLTFHPAGIRACAAPGDRRSDQNRRR--TAASSSSNWWAPVFGWSSEPDYIDSGSK 60
           MATNL TF P  IRACA+     +D NRR+  +++SSSSNWWAPVFGWSSEPDYIDSG+K
Sbjct: 1   MATNLFTFAPTSIRACASS----ADHNRRKASSSSSSSSNWWAPVFGWSSEPDYIDSGNK 60

Query: 61  E----LAGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRL 120
                LA G SKSDPE KS+  RFSPGCFTE+KARQLR+MT ETESFHDVMYHSAIASRL
Sbjct: 61  SNPKNLADGVSKSDPETKSSRNRFSPGCFTESKARQLRLMTMETESFHDVMYHSAIASRL 120

Query: 121 ASDFKTRADS 124
           A+DFK+R DS
Sbjct: 121 ATDFKSRGDS 126

[Close]

BLAST of MC06g0634 vs. ExPASy TrEMBL
Match: A0A6J1JBM9 (uncharacterized protein LOC111485309 OS=Cucurbita maxima OX=3661 GN=LOC111485309 PE=4 SV=1)

HSP 1 Score: 175 bits (444), Expect = 2.21e-54
Identity = 94/128 (73.44%), Postives = 103/128 (80.47%), Query Frame = 0


Query: 1   MATNLLTFHPAGIRACAAPGDRRSDQNRRRTAASSSSNWWAPVFGWSSEPDYIDSGSKEL 60
           MATNL TF P  IRACA+     +D NRR+T+ SSSSNWWAPVFGWSSEPDYIDS +K  
Sbjct: 1   MATNLFTFAPTSIRACASS----ADHNRRKTS-SSSSNWWAPVFGWSSEPDYIDSANKSN 60

Query: 61  ----AGGSSKSDPEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLAS 120
               A G SKSDPE KSA  RFSPGCFTE+KARQLR+MT ETESFHDVMYHSAIASRLA+
Sbjct: 61  PKTPADGVSKSDPETKSARNRFSPGCFTESKARQLRLMTMETESFHDVMYHSAIASRLAT 120

Query: 121 DFKTRADS 124
           DFK+R DS
Sbjct: 121 DFKSRGDS 123

[Close]

BLAST of MC06g0634 vs. TAIR 10
Match: AT1G52720.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.5 bits (236), Expect = 3.2e-20
Identity = 54/111 (48.65%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 13  IRACAAPGDRRSDQNRRRTAASSSSNWWAPVFGWSSEPDYIDSGSKELAGGSSKSDPEPK 72
           IRA +  G    DQNR+++AA     WWAP+FG  S+PDY++  S        K+D    
Sbjct: 13  IRASSGSGSLNPDQNRKKSAA-----WWAPLFGLPSDPDYLNIESSCSTVNPDKTD--IS 72

Query: 73  SASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASDFKTRAD 124
            +  +F  GCFTE KA+QLR  T E  +FHDVMYHSAIASRLASD   R +
Sbjct: 73  GSGQKFRRGCFTEEKAKQLRRKTAEASTFHDVMYHSAIASRLASDITGRVE 116

[Close]

BLAST of MC06g0634 vs. TAIR 10
Match: AT3G15630.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15
Identity = 50/113 (44.25%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 11  AGIRACAAPGDRR--SDQNRRRTAASSSSNWWAPVFGWSSEPDYIDSGSKELAGGSSKSD 70
           A I +C+A    R  S+ +  R    SS +WWAP+FG SSEPDY++         +   +
Sbjct: 2   ATIISCSALSSIRASSESDPARKKPVSSVSWWAPLFGMSSEPDYVNK--------TVNLE 61

Query: 71  PEPKSASTRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASDFKTR 122
            +   A  R    C TE KA+QLR  T E  +FHDVMYHSAIASRLASD + +
Sbjct: 62  SDLDKAEKRSLRCCLTEEKAKQLRRKTAEASTFHDVMYHSAIASRLASDVRVK 106

The following BLAST results are available for this feature:

BLAST of MC06g0634 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g0634 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880363.1	7.92e-67	85.16	uncharacterized protein LOC120072011 [Benincasa hispida]	[more]
XP_011656185.1	5.13e-63	82.03	uncharacterized protein LOC105435656 [Cucumis sativus] >KGN65295.1 hypothetical ...	[more]
XP_016903293.1	1.45e-60	79.07	PREDICTED: uncharacterized protein LOC103502747 [Cucumis melo] >KAA0046733.1 unc...	[more]
KAG6589876.1	5.08e-56	74.42	hypothetical protein SDJN03_15299, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960569.1	6.11e-55	72.31	uncharacterized protein LOC111461308 [Cucurbita moschata]	[more]

BLAST of MC06g0634 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTN7	2.48e-63	82.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G303705 PE=4 SV=1	[more]
A0A5D3CSV6	7.04e-61	79.07	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4E4Y4	7.04e-61	79.07	uncharacterized protein LOC103502747 OS=Cucumis melo OX=3656 GN=LOC103502747 PE=...	[more]
A0A6J1HBD8	2.96e-55	72.31	uncharacterized protein LOC111461308 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]
A0A6J1JBM9	2.21e-54	73.44	uncharacterized protein LOC111485309 OS=Cucurbita maxima OX=3661 GN=LOC111485309...	[more]

BLAST of MC06g0634 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52720.1	3.2e-20	48.65	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G15630.1	1.1e-15	44.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..81
None	No IPR available	PANTHER	PTHR34198:SF18	PROTEIN, PUTATIVE-RELATED	coord: 1..123
None	No IPR available	PANTHER	PTHR34198	OS01G0175100 PROTEIN	coord: 1..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0634.1	MC06g0634.1	mRNA