MC06g0559 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0559
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	SAM domain-containing protein
Location	MC06: 4558438 .. 4559253 (-)
RNA-Seq Expression	MC06g0559
Synteny	MC06g0559

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTGGTTCTCTTGGCTCTCCCGAACCGGACTCGACCCGCTCCACACCTACGAATACGGCCTCCTTTTCGCCCGAAATGGGATCCGACCCGAAGACATTCCCCGCTTCAACCACGATTTTCTCCACAAAATCGGCGTCTCCGTCGCCAAACACAGGCTCGAGATTCTGAAGCTCGCCAAACTCGAAAATGAAGAACCGGCCGCCAAGAAATTTCCGGCCGCCGCCCCGCTCGTCTCCGCATTCGCCAAAACCAAAAAATGCCTCCGAAACTGCATCAGAAAATTGGTTCCGAGTAACGGCAAGCCGGAGAGGGCGGTTTTCCGGGAAGGCACGGCGGGCATTTCGCCGGAGCCGATGAGTTACAGCGAAAATCTCGGCCGGAAGCAGGAGGTTGAGGAGGTCTGGAAACGGAAACCGGCGAGTCGACGGAGGAAAAACGTGTCGCTTTCGGGGCCGTTGGATGGGAGAGGTCACGAGAAAGCGATGACGAATTGTAAGAGCCTGAAGTTATCTGGGCCGCTGGATAGAAAAGAGCGGCCCATGTTTTCGAGAAGCCCAAGAACATCTGGGCCTCTGGATGGGAGAGTATCGGATTGGGTTGCGGCGTCGAATAAGAGCCCGAAGTTTAATGGGCCGCCGCAGGGGAAAATGATGAGGCTGATACCGTCGAGCCGGAGCCCAAGAGTATCTGGGCCGCTGGATGGACGAGATGGAAGCCCAAGAATTTGCTGTCGCTGCAATAGGGAGAGAATAGAAACGGACGATGATTATCATTCATTATGGGTTTCCTTGTTTTATGACTTGAAACCTACG

mRNA sequence

ATGGACTGGTTCTCTTGGCTCTCCCGAACCGGACTCGACCCGCTCCACACCTACGAATACGGCCTCCTTTTCGCCCGAAATGGGATCCGACCCGAAGACATTCCCCGCTTCAACCACGATTTTCTCCACAAAATCGGCGTCTCCGTCGCCAAACACAGGCTCGAGATTCTGAAGCTCGCCAAACTCGAAAATGAAGAACCGGCCGCCAAGAAATTTCCGGCCGCCGCCCCGCTCGTCTCCGCATTCGCCAAAACCAAAAAATGCCTCCGAAACTGCATCAGAAAATTGGTTCCGAGTAACGGCAAGCCGGAGAGGGCGGTTTTCCGGGAAGGCACGGCGGGCATTTCGCCGGAGCCGATGAGTTACAGCGAAAATCTCGGCCGGAAGCAGGAGGTTGAGGAGGTCTGGAAACGGAAACCGGCGAGTCGACGGAGGAAAAACGTGTCGCTTTCGGGGCCGTTGGATGGGAGAGGTCACGAGAAAGCGATGACGAATTGTAAGAGCCTGAAGTTATCTGGGCCGCTGGATAGAAAAGAGCGGCCCATGTTTTCGAGAAGCCCAAGAACATCTGGGCCTCTGGATGGGAGAGTATCGGATTGGGTTGCGGCGTCGAATAAGAGCCCGAAGTTTAATGGGCCGCCGCAGGGGAAAATGATGAGGCTGATACCGTCGAGCCGGAGCCCAAGAGTATCTGGGCCGCTGGATGGACGAGATGGAAGCCCAAGAATTTGCTGTCGCTGCAATAGGGAGAGAATAGAAACGGACGATGATTATCATTCATTATGGGTTTCCTTGTTTTATGACTTGAAACCTACG

Coding sequence (CDS)

ATGGACTGGTTCTCTTGGCTCTCCCGAACCGGACTCGACCCGCTCCACACCTACGAATACGGCCTCCTTTTCGCCCGAAATGGGATCCGACCCGAAGACATTCCCCGCTTCAACCACGATTTTCTCCACAAAATCGGCGTCTCCGTCGCCAAACACAGGCTCGAGATTCTGAAGCTCGCCAAACTCGAAAATGAAGAACCGGCCGCCAAGAAATTTCCGGCCGCCGCCCCGCTCGTCTCCGCATTCGCCAAAACCAAAAAATGCCTCCGAAACTGCATCAGAAAATTGGTTCCGAGTAACGGCAAGCCGGAGAGGGCGGTTTTCCGGGAAGGCACGGCGGGCATTTCGCCGGAGCCGATGAGTTACAGCGAAAATCTCGGCCGGAAGCAGGAGGTTGAGGAGGTCTGGAAACGGAAACCGGCGAGTCGACGGAGGAAAAACGTGTCGCTTTCGGGGCCGTTGGATGGGAGAGGTCACGAGAAAGCGATGACGAATTGTAAGAGCCTGAAGTTATCTGGGCCGCTGGATAGAAAAGAGCGGCCCATGTTTTCGAGAAGCCCAAGAACATCTGGGCCTCTGGATGGGAGAGTATCGGATTGGGTTGCGGCGTCGAATAAGAGCCCGAAGTTTAATGGGCCGCCGCAGGGGAAAATGATGAGGCTGATACCGTCGAGCCGGAGCCCAAGAGTATCTGGGCCGCTGGATGGACGAGATGGAAGCCCAAGAATTTGCTGTCGCTGCAATAGGGAGAGAATAGAAACGGACGATGATTATCATTCATTATGGGTTTCCTTGTTTTATGACTTGAAACCTACG

Protein sequence

MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLAKLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPEPMSYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKERPMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPRVSGPLDGRDGSPRICCRCNRERIETDDDYHSLWVSLFYDLKPT

Homology

[Close]

BLAST of MC06g0559 vs. NCBI nr
Match: XP_022134673.1 (uncharacterized protein LOC111006885 [Momordica charantia])

HSP 1 Score: 563 bits (1450), Expect = 1.51e-202
Identity = 271/272 (99.63%), Postives = 271/272 (99.63%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60

Query: 61  KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPEPM 120
           KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPE M
Sbjct: 61  KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPETM 120

Query: 121 SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKER 180
           SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKER
Sbjct: 121 SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKER 180

Query: 181 PMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPRVSGPLDGRDGS 240
           PMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPRVSGPLDGRDGS
Sbjct: 181 PMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPRVSGPLDGRDGS 240

Query: 241 PRICCRCNRERIETDDDYHSLWVSLFYDLKPT 272
           PRICCRCNRERIETDDDYHSLWVSLFYDLKPT
Sbjct: 241 PRICCRCNRERIETDDDYHSLWVSLFYDLKPT 272

[Close]

BLAST of MC06g0559 vs. NCBI nr
Match: XP_022960905.1 (uncharacterized protein LOC111461567 [Cucurbita moschata])

HSP 1 Score: 440 bits (1132), Expect = 6.31e-154
Identity = 214/272 (78.68%), Postives = 236/272 (86.76%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARNG+RPEDIPRFNHDFL KIGVS+AKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPEPM 120
           K + EE   KK      L+SAFAKTK CLRNC+RKL+ +N K E+ +FRE  A +SPEP+
Sbjct: 80  KCDREEATRKKL-----LLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPI 139

Query: 121 SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKER 180
           +YSE+L RK EV+EV K  P  RR K+VSLSGPLDGR HEK MTN KSLKLSGPLDRKER
Sbjct: 140 TYSEDLSRKLEVKEVLK--PPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER 199

Query: 181 PMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPRVSGPLDGRDGS 240
           PMF RSPR+SGPLDGRVSDW  AS++SPK NGPPQG+MMRLIP SRSPRVSGPLDGRDGS
Sbjct: 200 PMFPRSPRSSGPLDGRVSDW--ASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGS 259

Query: 241 PRICCRCNRERIETDDDYHSLWVSLFYDLKPT 272
           PRICCRCNRER+ETDDDYHSLWVSLFYD+KPT
Sbjct: 260 PRICCRCNRERMETDDDYHSLWVSLFYDMKPT 282

[Close]

BLAST of MC06g0559 vs. NCBI nr
Match: XP_023516525.1 (uncharacterized protein LOC111780375 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439 bits (1130), Expect = 1.27e-153
Identity = 214/272 (78.68%), Postives = 236/272 (86.76%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARNG+RPEDIPRFNHDFL KIGVS+AKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPEPM 120
           K + EE   KK      L+SAFAKTK CLRNC+RKL+ +N K E+ +FRE  A ISPEP+
Sbjct: 80  KCDREEATQKKL-----LLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVISPEPI 139

Query: 121 SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKER 180
           +YSE+L RK EV+EV K  P  RR K+VSLSGPLDGR HEK MTN KSLKLSGPLDRKER
Sbjct: 140 TYSEDLSRKLEVKEVLK--PPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER 199

Query: 181 PMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPRVSGPLDGRDGS 240
           PMF RSPR+SGPLDGRVSDW  AS++SPK NGPPQG+MMRLIP SRSPRVSGPLDGRDGS
Sbjct: 200 PMFPRSPRSSGPLDGRVSDW--ASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGS 259

Query: 241 PRICCRCNRERIETDDDYHSLWVSLFYDLKPT 272
           P+ICCRCNRER+ETDDDYHSLWVSLFYD+KPT
Sbjct: 260 PKICCRCNRERMETDDDYHSLWVSLFYDMKPT 282

[Close]

BLAST of MC06g0559 vs. NCBI nr
Match: KAG6589808.1 (hypothetical protein SDJN03_15231, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 438 bits (1126), Expect = 2.61e-153
Identity = 213/272 (78.31%), Postives = 234/272 (86.03%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARNG+RPEDIPRFNHDFL KIGVS+AKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60

Query: 61  KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPEPM 120
           K   EE   KK      L+SAF KTK CLRNC+RKL+ +N K E+ +FRE  A +SPEP+
Sbjct: 61  KCNREEATQKKL-----LLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPI 120

Query: 121 SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKER 180
           +YSE+L RK EV+EV K  P  RR K+VSLSGPLDGR HEK MTN KSLKLSGPLDRKER
Sbjct: 121 TYSEDLSRKLEVKEVLK--PPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER 180

Query: 181 PMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPRVSGPLDGRDGS 240
           PMF RSPR+SGPLDGRVSDW  AS++SPK NGPPQG+MMRLIP SRSPRVSGPLDGRDGS
Sbjct: 181 PMFPRSPRSSGPLDGRVSDW--ASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGS 240

Query: 241 PRICCRCNRERIETDDDYHSLWVSLFYDLKPT 272
           PRICCRCNRER+ETDDDYHSLWVSLFYD+KPT
Sbjct: 241 PRICCRCNRERMETDDDYHSLWVSLFYDMKPT 263

[Close]

BLAST of MC06g0559 vs. NCBI nr
Match: KAG7023481.1 (hypothetical protein SDJN02_14506, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 437 bits (1125), Expect = 3.71e-153
Identity = 212/272 (77.94%), Postives = 234/272 (86.03%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARNG+RPEDIPRFNHDFL KIGVS+AKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60

Query: 61  KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPEPM 120
           K   EE   KK      L+SAF KTK CLRNC+RKL+ +N K E+ +FRE  A +SPEP+
Sbjct: 61  KCNREEATQKKL-----LLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPI 120

Query: 121 SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKER 180
           +YSE+L RK EV+EV K  P  RR K+VSLSGPLDGR HEK MTN KSLKLSGPLDRKER
Sbjct: 121 TYSEDLSRKLEVKEVLK--PPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER 180

Query: 181 PMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPRVSGPLDGRDGS 240
           PMF RSPR+SGPLDGRVSDW  AS++SPK NGPPQG+MMRLIP SRSPRVSGPLDGRDGS
Sbjct: 181 PMFPRSPRSSGPLDGRVSDW--ASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGS 240

Query: 241 PRICCRCNRERIETDDDYHSLWVSLFYDLKPT 272
           PR+CCRCNRER+ETDDDYHSLWVSLFYD+KPT
Sbjct: 241 PRVCCRCNRERMETDDDYHSLWVSLFYDMKPT 263

[Close]

BLAST of MC06g0559 vs. ExPASy TrEMBL
Match: A0A6J1C2N7 (uncharacterized protein LOC111006885 OS=Momordica charantia OX=3673 GN=LOC111006885 PE=4 SV=1)

HSP 1 Score: 563 bits (1450), Expect = 7.31e-203
Identity = 271/272 (99.63%), Postives = 271/272 (99.63%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60

Query: 61  KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPEPM 120
           KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPE M
Sbjct: 61  KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPETM 120

Query: 121 SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKER 180
           SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKER
Sbjct: 121 SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKER 180

Query: 181 PMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPRVSGPLDGRDGS 240
           PMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPRVSGPLDGRDGS
Sbjct: 181 PMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPRVSGPLDGRDGS 240

Query: 241 PRICCRCNRERIETDDDYHSLWVSLFYDLKPT 272
           PRICCRCNRERIETDDDYHSLWVSLFYDLKPT
Sbjct: 241 PRICCRCNRERIETDDDYHSLWVSLFYDLKPT 272

[Close]

BLAST of MC06g0559 vs. ExPASy TrEMBL
Match: A0A6J1HAF4 (uncharacterized protein LOC111461567 OS=Cucurbita moschata OX=3662 GN=LOC111461567 PE=4 SV=1)

HSP 1 Score: 440 bits (1132), Expect = 3.06e-154
Identity = 214/272 (78.68%), Postives = 236/272 (86.76%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARNG+RPEDIPRFNHDFL KIGVS+AKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPEPM 120
           K + EE   KK      L+SAFAKTK CLRNC+RKL+ +N K E+ +FRE  A +SPEP+
Sbjct: 80  KCDREEATRKKL-----LLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPI 139

Query: 121 SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKER 180
           +YSE+L RK EV+EV K  P  RR K+VSLSGPLDGR HEK MTN KSLKLSGPLDRKER
Sbjct: 140 TYSEDLSRKLEVKEVLK--PPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER 199

Query: 181 PMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPRVSGPLDGRDGS 240
           PMF RSPR+SGPLDGRVSDW  AS++SPK NGPPQG+MMRLIP SRSPRVSGPLDGRDGS
Sbjct: 200 PMFPRSPRSSGPLDGRVSDW--ASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGS 259

Query: 241 PRICCRCNRERIETDDDYHSLWVSLFYDLKPT 272
           PRICCRCNRER+ETDDDYHSLWVSLFYD+KPT
Sbjct: 260 PRICCRCNRERMETDDDYHSLWVSLFYDMKPT 282

[Close]

BLAST of MC06g0559 vs. ExPASy TrEMBL
Match: A0A6J1JJY8 (uncharacterized protein LOC111485262 OS=Cucurbita maxima OX=3661 GN=LOC111485262 PE=4 SV=1)

HSP 1 Score: 432 bits (1111), Expect = 2.44e-151
Identity = 211/272 (77.57%), Postives = 233/272 (85.66%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARNG++PEDIPRFNHDFL +IGVS+AKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLKPEDIPRFNHDFLQRIGVSIAKHRLEILKLA 60

Query: 61  KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPEPM 120
           K + EE   KK      L+SA AKTK CLRNC+RKL+ +N K E+ +FRE  A ISPEP+
Sbjct: 61  KCDREEATQKKL-----LLSALAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVISPEPI 120

Query: 121 SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKER 180
           +YSE+L RKQEV+EV K  P  RR K+VSLSGPLDGR HEK MTN KSLKLSGPLDRKER
Sbjct: 121 TYSEDLSRKQEVKEVLK--PPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKER 180

Query: 181 PMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPRVSGPLDGRDGS 240
           PM  RSPR SGPLDGRVSDW  AS++SPK NGPPQG+MMRLIP SRSPRVS PLDGRDGS
Sbjct: 181 PMVPRSPRLSGPLDGRVSDW--ASSRSPKMNGPPQGRMMRLIPPSRSPRVSEPLDGRDGS 240

Query: 241 PRICCRCNRERIETDDDYHSLWVSLFYDLKPT 272
           PRICCRCNRER+ETDDDYHSLWVSLFYD+KPT
Sbjct: 241 PRICCRCNRERMETDDDYHSLWVSLFYDMKPT 263

[Close]

BLAST of MC06g0559 vs. ExPASy TrEMBL
Match: A0A0A0LTT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264010 PE=4 SV=1)

HSP 1 Score: 366 bits (939), Expect = 4.12e-125
Identity = 191/283 (67.49%), Postives = 218/283 (77.03%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60
           MDWFSWLSRTGLDPL+TYEYGLLFARN ++PEDIPRFNH FL KIG+S+AKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLYTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPEPM 120
           K    +P         PL+SAF KTK CLRNC+R+L+  +   E+ +       ISPEP 
Sbjct: 61  KSHTHQPNLNN-----PLISAFFKTKICLRNCLRRLISPSPALEKPI-------ISPEPP 120

Query: 121 SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKER 180
             S +   K +V+EV K  P  RR K+VSLSGPLD R HEK + + KSLKLSGPLDRKER
Sbjct: 121 PSSLDEP-KVKVKEVLK--PPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKER 180

Query: 181 -----------PMFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSPR 240
                      PMF+RSPRTSGPLDGR+SDW + SNKSPK NGPPQG+MMRLIP SRSPR
Sbjct: 181 APSSPSPSPLPPMFTRSPRTSGPLDGRISDW-SLSNKSPKMNGPPQGRMMRLIPPSRSPR 240

Query: 241 VSGPLDGRDGSPRICCRCNRERIETDDDYHSLWVSLFYDLKPT 272
           VSGPLDGRDGSPRICCRCNRER+E++DDYHSLWVSLFYD+KPT
Sbjct: 241 VSGPLDGRDGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 266

[Close]

BLAST of MC06g0559 vs. ExPASy TrEMBL
Match: A0A5A7U992 (Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00390 PE=4 SV=1)

HSP 1 Score: 365 bits (936), Expect = 1.22e-124
Identity = 192/284 (67.61%), Postives = 217/284 (76.41%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARN ++PEDIPRFNH FL KIG+S+AKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KLEN-EEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPEP 120
           K     +P         PL+SAF KTK CLRNC+R+L+  +  P++ +       ISPEP
Sbjct: 61  KSHTTHQPNLNN-----PLISAFFKTKICLRNCLRRLISPSPAPDKPI-------ISPEP 120

Query: 121 MSYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLKLSGPLDRKE 180
              S +   K +V+EV K  P  RR K+VSLSGPLD R HEK + + KSLKLSGPLDRKE
Sbjct: 121 PPSSLDEP-KVKVKEVLK--PPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKE 180

Query: 181 RP-----------MFSRSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSRSP 240
           RP           MF RSPRTSGPLDGR+SDW   SNKSPK NGPPQG+MMRLIP SRSP
Sbjct: 181 RPPPSPSPSPLPPMFPRSPRTSGPLDGRISDW-GLSNKSPKVNGPPQGRMMRLIPPSRSP 240

Query: 241 RVSGPLDGRDGSPRICCRCNRERIETDDDYHSLWVSLFYDLKPT 272
           RVSGPLDGRDGSPRICCRCNRER+E++DDYHSLWVSLFYD+KPT
Sbjct: 241 RVSGPLDGRDGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 267

[Close]

BLAST of MC06g0559 vs. TAIR 10
Match: AT2G12462.1 (BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 140.2 bits (352), Expect = 2.5e-33
Identity = 106/286 (37.06%), Postives = 154/286 (53.85%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60
           MDWFSWLS+T LDP  +YEYGL+FA+  ++ EDI  FNH+FL ++GV+V KHR+EILKL+
Sbjct: 1   MDWFSWLSKTDLDPTLSYEYGLIFAQKKLQGEDIALFNHNFLRRLGVTVTKHRVEILKLS 60

Query: 61  KLENEEPAAKKF-PAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPEP 120
           K E +  ++    P +A L+S   K  K + N + K +   G    AV        SP P
Sbjct: 61  KRETQALSSYNHRPVSAKLISVVIKATKSVGNRLNKWLSLGG---TAVVEPLKEKQSPPP 120

Query: 121 -------MSYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLD-GRGHEKAMT--NCKSL 180
                  ++ + N    ++     +R P  +R++ V  SGPLD   G ++ MT  + +S+
Sbjct: 121 AYRTGAFLTGNNNKVNAEKAVVQVERLPVIKRKRIVK-SGPLDRNHGIQEKMTLVSNRSM 180

Query: 181 KLSGPLDR--KERPMFS-RSPRTSGPLDGRVSDWVAASNKSPKFNGPPQGKMMRLIPSSR 240
            LSGPLDR  +ER + + RSP  SG LDG +++                    RL     
Sbjct: 181 NLSGPLDRSVQERLILAYRSPIVSGQLDGNLNE--------------------RL----- 240

Query: 241 SPRVSGPLDGRDGSPRICCRCNRERIETDDDYHSLWVSLFYDLKPT 273
             R+SGPL GR  SP +    N+     DDD  + W ++F++LKPT
Sbjct: 241 --RLSGPLKGRPPSPSVYVEYNKR----DDD--TRWDAMFHNLKPT 249

[Close]

BLAST of MC06g0559 vs. TAIR 10
Match: AT1G15760.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-19
Identity = 44/92 (47.83%), Postives = 64/92 (69.57%), Query Frame = 0


Query: 3  WFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLAKL 62
          WFSWLSRT L+P   +EYGL F++N +  EDI  F+H+FL  +G+S+AKHRLEILKLA+ 
Sbjct: 5  WFSWLSRTNLEPSLIHEYGLSFSQNELEHEDISYFDHEFLQSMGISIAKHRLEILKLARR 64

Query: 63 ENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIR 95
          + +        + + +V+A  KT+KCL + +R
Sbjct: 65 DRKNSPPLTSRSISRVVTAIKKTRKCLSDHVR 96

[Close]

BLAST of MC06g0559 vs. TAIR 10
Match: AT1G80520.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 92.0 bits (227), Expect = 7.7e-19
Identity = 46/94 (48.94%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 1  MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60
          MDWFSWLSRT L+    YEYGL F+ N +  EDI  FNH+FL  +G+S+AKHRLEILKLA
Sbjct: 1  MDWFSWLSRTNLEASLIYEYGLSFSNNELEYEDIAYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61 KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIR 95
          +  + +P+     +   ++ A  KT KC    +R
Sbjct: 61 R-RDRKPSPLTARSIFRVLIAIKKTGKCFSEHVR 93

The following BLAST results are available for this feature:

BLAST of MC06g0559 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g0559 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134673.1	1.51e-202	99.63	uncharacterized protein LOC111006885 [Momordica charantia]	[more]
XP_022960905.1	6.31e-154	78.68	uncharacterized protein LOC111461567 [Cucurbita moschata]	[more]
XP_023516525.1	1.27e-153	78.68	uncharacterized protein LOC111780375 [Cucurbita pepo subsp. pepo]	[more]
KAG6589808.1	2.61e-153	78.31	hypothetical protein SDJN03_15231, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7023481.1	3.71e-153	77.94	hypothetical protein SDJN02_14506, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of MC06g0559 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2N7	7.31e-203	99.63	uncharacterized protein LOC111006885 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1HAF4	3.06e-154	78.68	uncharacterized protein LOC111461567 OS=Cucurbita moschata OX=3662 GN=LOC1114615...	[more]
A0A6J1JJY8	2.44e-151	77.57	uncharacterized protein LOC111485262 OS=Cucurbita maxima OX=3661 GN=LOC111485262...	[more]
A0A0A0LTT1	4.12e-125	67.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264010 PE=4 SV=1	[more]
A0A5A7U992	1.22e-124	67.61	Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of MC06g0559 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G12462.1	2.5e-33	37.06	BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-con...	[more]
AT1G15760.1	1.2e-19	47.83	Sterile alpha motif (SAM) domain-containing protein	[more]
AT1G80520.1	7.7e-19	48.94	Sterile alpha motif (SAM) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001660	Sterile alpha motif domain	PFAM	PF07647	SAM_2	coord: 6..58 e-value: 5.0E-5 score: 23.3
IPR013761	Sterile alpha motif/pointed domain superfamily	GENE3D	1.10.150.50		coord: 1..68 e-value: 1.7E-9 score: 39.1
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	47769	SAM/Pointed domain	coord: 12..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..197
None	No IPR available	PANTHER	PTHR33915:SF3	STERILE ALPHA MOTIF (SAM) DOMAIN PROTEIN	coord: 1..272
None	No IPR available	PANTHER	PTHR33915	OSJNBA0033G05.11 PROTEIN	coord: 1..272
None	No IPR available	CDD	cd09487	SAM_superfamily	coord: 2..61 e-value: 2.62735E-9 score: 50.3157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0559.1	MC06g0559.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding