MC06g0544 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g0544
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionSerine/threonine-protein phosphatase 7 long form-like protein
LocationMC06: 4469052 .. 4469330 (+)
RNA-Seq ExpressionMC06g0544
SyntenyMC06g0544
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGACGGCTTACTCACATCTGTCTACCACGGCTGCATCGCCGCCTCCGACGCCGAGATCGACCGCCGCCCCTACCACAAGAACTGCGGCTGCGCCCTCCACGACCGGGGAAACAGACGCTGCTCACACGCCTTCTCCAAGCACAACTCTGTCTCGTATCCGATCAGACGGGCCTGGAGTGAAGGCAGCTTGGCCATTATGGCTTCTGCTTCTGGCATTTCTTCGCCCTCTTCTCCCACGGATCAGGTGGAAAGCCTCGTCGGATCTAACAGGAGA

mRNA sequence

ATGGCCGACGGCTTACTCACATCTGTCTACCACGGCTGCATCGCCGCCTCCGACGCCGAGATCGACCGCCGCCCCTACCACAAGAACTGCGGCTGCGCCCTCCACGACCGGGGAAACAGACGCTGCTCACACGCCTTCTCCAAGCACAACTCTGTCTCGTATCCGATCAGACGGGCCTGGAGTGAAGGCAGCTTGGCCATTATGGCTTCTGCTTCTGGCATTTCTTCGCCCTCTTCTCCCACGGATCAGGTGGAAAGCCTCGTCGGATCTAACAGGAGA

Coding sequence (CDS)

ATGGCCGACGGCTTACTCACATCTGTCTACCACGGCTGCATCGCCGCCTCCGACGCCGAGATCGACCGCCGCCCCTACCACAAGAACTGCGGCTGCGCCCTCCACGACCGGGGAAACAGACGCTGCTCACACGCCTTCTCCAAGCACAACTCTGTCTCGTATCCGATCAGACGGGCCTGGAGTGAAGGCAGCTTGGCCATTATGGCTTCTGCTTCTGGCATTTCTTCGCCCTCTTCTCCCACGGATCAGGTGGAAAGCCTCGTCGGATCTAACAGGAGA

Protein sequence

MADGLLTSVYHGCIAASDAEIDRRPYHKNCGCALHDRGNRRCSHAFSKHNSVSYPIRRAWSEGSLAIMASASGISSPSSPTDQVESLVGSNRR
Homology
BLAST of MC06g0544 vs. NCBI nr
Match: XP_008443899.1 (PREDICTED: uncharacterized protein LOC103487382 [Cucumis melo])

HSP 1 Score: 136 bits (343), Expect = 1.36e-39
Identity = 72/96 (75.00%), Postives = 79/96 (82.29%), Query Frame = 0

Query: 1  MADGLLTSVYHGCIAASDAEIDRRPYHKNCGCALHDRGNRRCSHAFSKHNSVSYPIRRAW 60
          MAD  L  VYHGCIA  DA IDRRPYHKNC CALHDR NRRCSH+ SKH SVSYPIRRAW
Sbjct: 1  MADAFLRCVYHGCIAGPDAGIDRRPYHKNCSCALHDRDNRRCSHSLSKHKSVSYPIRRAW 60

Query: 61 SEGSLAIMAS--ASGISSPSSPT-DQVESLVGSNRR 93
          SEG LA++A+  ASG+SSPSSP+ DQVESL GS +R
Sbjct: 61 SEGCLAMVAASAASGVSSPSSPSMDQVESL-GSYKR 95

BLAST of MC06g0544 vs. NCBI nr
Match: KAG6587850.1 (hypothetical protein SDJN03_16415, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 135 bits (341), Expect = 2.66e-39
Identity = 69/94 (73.40%), Postives = 74/94 (78.72%), Query Frame = 0

Query: 1  MADGLLTSVYHGCIAASDAEIDRRPYHKNCGCALHDRGNRRCSHAFSKHNSVSYPIRRAW 60
          MAD L  SVYHGCIA  DAEI RRPYHKNCGCALHDR NRRCSH+ SKH++VSYPIRRAW
Sbjct: 1  MADALFGSVYHGCIATCDAEIARRPYHKNCGCALHDRDNRRCSHSMSKHSTVSYPIRRAW 60

Query: 61 SEGSLAIMA-SASGISSPSSPTDQVESLVGSNRR 93
          SEG LA+ A S SGISSPSS        +GSNRR
Sbjct: 61 SEGCLAMAAASGSGISSPSSSPSMESEGLGSNRR 94

BLAST of MC06g0544 vs. NCBI nr
Match: KAE8653037.1 (hypothetical protein Csa_019637 [Cucumis sativus])

HSP 1 Score: 133 bits (335), Expect = 2.39e-38
Identity = 66/86 (76.74%), Postives = 74/86 (86.05%), Query Frame = 0

Query: 1  MADGLLTSVYHGCIAASDAEIDRRPYHKNCGCALHDRGNRRCSHAFSKHNSVSYPIRRAW 60
          MAD LL  VY+GCI + DAEIDRRPYHKNC CALHDR N+RCSH+ SKH SVSYPIRRAW
Sbjct: 1  MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAW 60

Query: 61 SEGSLAIMASASGISSPSSPT-DQVE 85
          SEG LA++A ASGISSPSSP+ DQ+E
Sbjct: 61 SEGCLAMVA-ASGISSPSSPSMDQIE 85

BLAST of MC06g0544 vs. NCBI nr
Match: OMO52292.1 (hypothetical protein CCACVL1_29274 [Corchorus capsularis])

HSP 1 Score: 108 bits (269), Expect = 4.42e-28
Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 0

Query: 2  ADGLLTSVYHGCIAASDAEIDRRPYHKNCGCALHDRGNRRCSHAFSKHNSVSYPIRRAWS 61
          ADGL  SVY GCI+ SD  I+RRPYH+NCGCALHD+    C HAF K+ +VSYP+RRAWS
Sbjct: 6  ADGLFRSVYEGCISGSDIGIERRPYHRNCGCALHDKSKGNCPHAFPKNKNVSYPLRRAWS 65

Query: 62 EGSLAIMASASGISSPSS 79
          EG LA+  ++S  SSPSS
Sbjct: 66 EGCLAMAVASSCHSSPSS 83

BLAST of MC06g0544 vs. NCBI nr
Match: CAB4319101.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 106 bits (265), Expect = 2.68e-27
Identity = 53/93 (56.99%), Postives = 67/93 (72.04%), Query Frame = 0

Query: 2   ADGLLTSVYHGCIAASDAEIDRRPYHKNCGCALHDRG-NRRCSHAFSKHNSVSYPIRRAW 61
           ADGL   VY GCIA SD  ++RRPYH+NCGCALH++  N++C+H   K   VSYP+RRAW
Sbjct: 8   ADGLFRCVYEGCIAGSDVGVERRPYHRNCGCALHNKSRNKQCTHGGPKCKKVSYPMRRAW 67

Query: 62  SEGSLAIMASASGISSPSSPTDQVESLVGSNRR 93
           SEGSLA++A+AS  SSPSS   Q   +V   R+
Sbjct: 68  SEGSLALVAAASAHSSPSSSPAQHHHVVAVGRQ 100

BLAST of MC06g0544 vs. ExPASy TrEMBL
Match: A0A0A0LWK0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265650 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 4.23e-40
Identity = 72/94 (76.60%), Postives = 80/94 (85.11%), Query Frame = 0

Query: 1  MADGLLTSVYHGCIAASDAEIDRRPYHKNCGCALHDRGNRRCSHAFSKHNSVSYPIRRAW 60
          MAD LL  VY+GCI + DAEIDRRPYHKNC CALHDR N+RCSH+ SKH SVSYPIRRAW
Sbjct: 1  MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAW 60

Query: 61 SEGSLAIMASASGISSPSSPT-DQVESLVGSNRR 93
          SEG LA++A ASGISSPSSP+ DQVESL GS +R
Sbjct: 61 SEGCLAMVA-ASGISSPSSPSMDQVESL-GSYKR 92

BLAST of MC06g0544 vs. ExPASy TrEMBL
Match: A0A1S3B9X6 (uncharacterized protein LOC103487382 OS=Cucumis melo OX=3656 GN=LOC103487382 PE=4 SV=1)

HSP 1 Score: 136 bits (343), Expect = 6.58e-40
Identity = 72/96 (75.00%), Postives = 79/96 (82.29%), Query Frame = 0

Query: 1  MADGLLTSVYHGCIAASDAEIDRRPYHKNCGCALHDRGNRRCSHAFSKHNSVSYPIRRAW 60
          MAD  L  VYHGCIA  DA IDRRPYHKNC CALHDR NRRCSH+ SKH SVSYPIRRAW
Sbjct: 1  MADAFLRCVYHGCIAGPDAGIDRRPYHKNCSCALHDRDNRRCSHSLSKHKSVSYPIRRAW 60

Query: 61 SEGSLAIMAS--ASGISSPSSPT-DQVESLVGSNRR 93
          SEG LA++A+  ASG+SSPSSP+ DQVESL GS +R
Sbjct: 61 SEGCLAMVAASAASGVSSPSSPSMDQVESL-GSYKR 95

BLAST of MC06g0544 vs. ExPASy TrEMBL
Match: A0A1R3G2H0 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29274 PE=4 SV=1)

HSP 1 Score: 108 bits (269), Expect = 2.14e-28
Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 0

Query: 2  ADGLLTSVYHGCIAASDAEIDRRPYHKNCGCALHDRGNRRCSHAFSKHNSVSYPIRRAWS 61
          ADGL  SVY GCI+ SD  I+RRPYH+NCGCALHD+    C HAF K+ +VSYP+RRAWS
Sbjct: 6  ADGLFRSVYEGCISGSDIGIERRPYHRNCGCALHDKSKGNCPHAFPKNKNVSYPLRRAWS 65

Query: 62 EGSLAIMASASGISSPSS 79
          EG LA+  ++S  SSPSS
Sbjct: 66 EGCLAMAVASSCHSSPSS 83

BLAST of MC06g0544 vs. ExPASy TrEMBL
Match: A0A6J5Y140 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS46277 PE=4 SV=1)

HSP 1 Score: 106 bits (265), Expect = 1.30e-27
Identity = 53/93 (56.99%), Postives = 67/93 (72.04%), Query Frame = 0

Query: 2   ADGLLTSVYHGCIAASDAEIDRRPYHKNCGCALHDRG-NRRCSHAFSKHNSVSYPIRRAW 61
           ADGL   VY GCIA SD  ++RRPYH+NCGCALH++  N++C+H   K   VSYP+RRAW
Sbjct: 8   ADGLFRCVYEGCIAGSDVGVERRPYHRNCGCALHNKSRNKQCTHGGPKCKKVSYPMRRAW 67

Query: 62  SEGSLAIMASASGISSPSSPTDQVESLVGSNRR 93
           SEGSLA++A+AS  SSPSS   Q   +V   R+
Sbjct: 68  SEGSLALVAAASAHSSPSSSPAQHHHVVAVGRQ 100

BLAST of MC06g0544 vs. ExPASy TrEMBL
Match: A0A6J5VM34 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS46993 PE=4 SV=1)

HSP 1 Score: 105 bits (263), Expect = 2.61e-27
Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 0

Query: 2   ADGLLTSVYHGCIAASDAEIDRRPYHKNCGCALHDRG-NRRCSHAFSKHNSVSYPIRRAW 61
           ADGL   VY GCIA SD  ++RRPYH+NCGCALH +  N++C+H   K   VSYP+RRAW
Sbjct: 8   ADGLFRCVYEGCIAGSDVGVERRPYHRNCGCALHKKSRNKQCTHGGPKCKKVSYPMRRAW 67

Query: 62  SEGSLAIMASASGISSPSSPTDQVESLVGSNRR 93
           SEGSLA++A+AS  SSPSS   Q   +V   R+
Sbjct: 68  SEGSLALVAAASAHSSPSSSPAQHHHVVAVGRQ 100

BLAST of MC06g0544 vs. TAIR 10
Match: AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 81.6 bits (200), Expect = 3.6e-16
Identity = 43/100 (43.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query: 2  ADGLLTSVYHGCIAASDAEIDRRPYHKNCGCALHDRG-------NRRCSHAFSKH---NS 61
          ADG+  S++ GCI+  D+ I+RRPYHKNCGCALHD+        N+R   +  +H    S
Sbjct: 3  ADGIFRSIFEGCISGLDSAIERRPYHKNCGCALHDKSSGAGKNQNQRRPPSCRRHGSSES 62

Query: 62 VSYPIRRAWSEGSLAIMASASGISSPSSPTDQVESLVGSN 92
          +S+PIRR+WSEG++  M     + S SS +  ++SL  S+
Sbjct: 63 ISFPIRRSWSEGNIMAM----NLFSSSSSSSNLQSLSSSS 98

BLAST of MC06g0544 vs. TAIR 10
Match: AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 7.4e-14
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 0

Query: 3  DGLLTSVYHGCIAASDAEIDRRPYHKNCGCALHDRGNRRCSHAFSKHNS---VSYPIRRA 62
          DG+  +++ GCI++ D+ I RRPYHKNCGCALH+R     S    +H     V +PI+R+
Sbjct: 7  DGIFRNIFEGCISSCDSSIQRRPYHKNCGCALHERSRGGGSATPCRHGRSEVVMFPIQRS 66

Query: 63 WSEG-SLAIMASASGISS 77
          WSEG SLA+  ++S  SS
Sbjct: 67 WSEGNSLALHLASSSSSS 84

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_008443899.11.36e-3975.00PREDICTED: uncharacterized protein LOC103487382 [Cucumis melo][more]
KAG6587850.12.66e-3973.40hypothetical protein SDJN03_16415, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8653037.12.39e-3876.74hypothetical protein Csa_019637 [Cucumis sativus][more]
OMO52292.14.42e-2864.10hypothetical protein CCACVL1_29274 [Corchorus capsularis][more]
CAB4319101.12.68e-2756.99unnamed protein product [Prunus armeniaca][more]
Match NameE-valueIdentityDescription
A0A0A0LWK04.23e-4076.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265650 PE=4 SV=1[more]
A0A1S3B9X66.58e-4075.00uncharacterized protein LOC103487382 OS=Cucumis melo OX=3656 GN=LOC103487382 PE=... [more]
A0A1R3G2H02.14e-2864.10Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29274 PE=4 ... [more]
A0A6J5Y1401.30e-2756.99Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS46277 PE=... [more]
A0A6J5VM342.61e-2756.99Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS46993 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT2G46490.13.6e-1643.00unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G35110.17.4e-1447.44unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..93
NoneNo IPR availablePANTHERPTHR35121HOMEODOMAIN PROTEIN 8, PUTATIVE-RELATEDcoord: 2..85
NoneNo IPR availablePANTHERPTHR35121:SF2BNAC04G52100D PROTEINcoord: 2..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g0544.1MC06g0544.1mRNA