MC06g0387 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0387
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Sodium transporter HKT1-like
Location	MC06: 3100443 .. 3100712 (+)
RNA-Seq Expression	MC06g0387
Synteny	MC06g0387

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGGATTCAACTATTTTATTTCATCTCCATCTCTTCTTTTGGATTTCTAATTTTGACGATATTAAAACCTAGAACGGATCCTTCTTTTCGACCCACAAATCTAGATTTGTTCTACACTTCAGTGTCTGCCTCCACTGTTTCGAGCATGTCCGCCATGAAAATGGAAGTTTTCTCCAATTCCCAACTCATTACCTTAACAATTCTCATGTTTCTAGGGGGAGAGATTTTCACTTCCATGGTTGGCCTCCACTTGAGAAAATTTAGCCAC

mRNA sequence

TTTTGGATTCAACTATTTTATTTCATCTCCATCTCTTCTTTTGGATTTCTAATTTTGACGATATTAAAACCTAGAACGGATCCTTCTTTTCGACCCACAAATCTAGATTTGTTCTACACTTCAGTGTCTGCCTCCACTGTTTCGAGCATGTCCGCCATGAAAATGGAAGTTTTCTCCAATTCCCAACTCATTACCTTAACAATTCTCATGTTTCTAGGGGGAGAGATTTTCACTTCCATGGTTGGCCTCCACTTGAGAAAATTTAGCCAC

Coding sequence (CDS)

TTTTGGATTCAACTATTTTATTTCATCTCCATCTCTTCTTTTGGATTTCTAATTTTGACGATATTAAAACCTAGAACGGATCCTTCTTTTCGACCCACAAATCTAGATTTGTTCTACACTTCAGTGTCTGCCTCCACTGTTTCGAGCATGTCCGCCATGAAAATGGAAGTTTTCTCCAATTCCCAACTCATTACCTTAACAATTCTCATGTTTCTAGGGGGAGAGATTTTCACTTCCATGGTTGGCCTCCACTTGAGAAAATTTAGCCAC

Protein sequence

FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSNSQLITLTILMFLGGEIFTSMVGLHLRKFSH

Homology

[Close]

BLAST of MC06g0387 vs. ExPASy Swiss-Prot
Match: A2WNZ9 (Cation transporter HKT8 OS=Oryza sativa subsp. indica OX=39946 GN=HKT8 PE=2 SV=2)

HSP 1 Score: 92.8 bits (229), Expect = 2.1e-18
Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 1   FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
           FW+QL YF+ IS  GFL+L  L  +T    RP +LDL +TSVSA+TVSSM A++ME FSN
Sbjct: 28  FWLQLLYFLFISLLGFLMLKALPMKTSMVPRPMDLDLIFTSVSATTVSSMVAVEMESFSN 87

Query: 61  SQLITLTILMFLGGEIFTSMVGLH 85
           SQL+ +T+LM LGGE+FTS++GL+
Sbjct: 88  SQLLLITLLMLLGGEVFTSILGLY 111

[Close]

BLAST of MC06g0387 vs. ExPASy Swiss-Prot
Match: Q0JNB6 (Cation transporter HKT8 OS=Oryza sativa subsp. japonica OX=39947 GN=HKT8 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.1e-18
Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 1   FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
           FW+QL YF+ IS  GFL+L  L  +T    RP +LDL +TSVSA+TVSSM A++ME FSN
Sbjct: 28  FWLQLLYFLFISLLGFLMLKALPMKTSMVPRPMDLDLIFTSVSATTVSSMVAVEMESFSN 87

Query: 61  SQLITLTILMFLGGEIFTSMVGLH 85
           SQL+ +T+LM LGGE+FTS++GL+
Sbjct: 88  SQLLLITLLMLLGGEVFTSILGLY 111

[Close]

BLAST of MC06g0387 vs. ExPASy Swiss-Prot
Match: Q84TI7 (Sodium transporter HKT1 OS=Arabidopsis thaliana OX=3702 GN=HKT1 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.1e-18
Identity = 54/89 (60.67%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 1   FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
           F++   YF+  S  GFL L I KPRT  + RP + DLF+TSVSA TVSSMS + MEVFSN
Sbjct: 22  FFLYFIYFLFFSFLGFLALKITKPRT--TSRPHDFDLFFTSVSAITVSSMSTVDMEVFSN 81

Query: 61  SQLITLTILMFLGGEIFTSMVGLHLRKFS 90
           +QLI LTILMFLGGEIFTS + L++  F+
Sbjct: 82  TQLIFLTILMFLGGEIFTSFLNLYVSYFT 108

[Close]

BLAST of MC06g0387 vs. ExPASy Swiss-Prot
Match: Q7XPF7 (Probable cation transporter HKT7 OS=Oryza sativa subsp. japonica OX=39947 GN=HKT7 PE=2 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-15
Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 7  YFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSNSQLITL 66
          YF++IS  G+ +L +LK R +P   P  +D F+T+VSA+TVSSMS ++MEVFSN QL+ L
Sbjct: 19 YFLAISCLGYGLLGVLKVR-EPGAAPRRIDRFFTAVSAATVSSMSTVEMEVFSNGQLVVL 78

Query: 67 TILMFLGGEIFTSMVGL 84
          T+LM LGGE+F S+VGL
Sbjct: 79 TVLMLLGGEVFVSLVGL 94

[Close]

BLAST of MC06g0387 vs. ExPASy Swiss-Prot
Match: Q93XI5 (Cation transporter HKT2 OS=Oryza sativa subsp. indica OX=39946 GN=HKT2 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.8e-15
Identity = 44/86 (51.16%), Postives = 62/86 (72.09%), Query Frame = 0


Query: 1   FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
           FWIQL YF+ IS  G ++L  LKP + P F+P  +D+ + S SA TVS +S ++MEV S+
Sbjct: 41  FWIQLSYFLLISILGSVLLMFLKP-SSPEFKPGYIDMLFLSTSAMTVSGLSTIEMEVLSS 100

Query: 61  SQLITLTILMFLGGEIFTSMVGLHLR 87
           SQ++ LT+LM +GGE+F S +GL LR
Sbjct: 101 SQIVVLTLLMLVGGEVFVSFLGLMLR 125

[Close]

BLAST of MC06g0387 vs. NCBI nr
Match: XP_022134790.1 (cation transporter HKT8-like [Momordica charantia])

HSP 1 Score: 165 bits (417), Expect = 3.01e-48
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
          FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN
Sbjct: 10 FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 69

Query: 61 SQLITLTILMFLGGEIFTSMVGLHLRKFS 89
          SQLITLTILMFLGGEIFTSMVGLHLRKFS
Sbjct: 70 SQLITLTILMFLGGEIFTSMVGLHLRKFS 98

[Close]

BLAST of MC06g0387 vs. NCBI nr
Match: XP_038878278.1 (cation transporter HKT8-like [Benincasa hispida])

HSP 1 Score: 137 bits (345), Expect = 5.08e-36
Identity = 74/87 (85.06%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 1   FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
           FWIQ FYFI ISSFGFL+L ILKP T PSF+PT LDLFYTSVSASTVSSMS+++MEVFSN
Sbjct: 22  FWIQFFYFIFISSFGFLLLMILKPSTYPSFQPTKLDLFYTSVSASTVSSMSSIEMEVFSN 81

Query: 61  SQLITLTILMFLGGEIFTSMVGLHLRK 87
           SQLI LTILMF+GGEIFTSMVGLHLRK
Sbjct: 82  SQLIILTILMFIGGEIFTSMVGLHLRK 108

[Close]

BLAST of MC06g0387 vs. NCBI nr
Match: XP_004150748.3 (cation transporter HKT8 isoform X1 [Cucumis sativus])

HSP 1 Score: 135 bits (341), Expect = 1.96e-35
Identity = 72/87 (82.76%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 1   FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
           FWIQ FYFI ISSFGFLIL ILKP+T P F+PT LDLFYTSVSASTVSSMS+++MEVFSN
Sbjct: 24  FWIQFFYFIFISSFGFLILMILKPKTYPFFQPTKLDLFYTSVSASTVSSMSSIEMEVFSN 83

Query: 61  SQLITLTILMFLGGEIFTSMVGLHLRK 87
           SQLI LT+LMF+GGEIFTSMVGLHLR+
Sbjct: 84  SQLIVLTVLMFIGGEIFTSMVGLHLRR 110

[Close]

BLAST of MC06g0387 vs. NCBI nr
Match: PQP96795.1 (sodium transporter HKT1-like [Prunus yedoensis var. nudiflora])

HSP 1 Score: 127 bits (320), Expect = 2.80e-32
Identity = 66/89 (74.16%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 1   FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
           FWI+L YF+++S  GF +L +LKPRTDPSFRP NLDLF+TSVSASTVSSMS ++MEVFSN
Sbjct: 19  FWIELVYFVTLSFLGFGVLKVLKPRTDPSFRPRNLDLFFTSVSASTVSSMSTVEMEVFSN 78

Query: 61  SQLITLTILMFLGGEIFTSMVGLHLRKFS 89
           +QLI LTILMF+GGE+FTSMVGL L KF+
Sbjct: 79  AQLIILTILMFIGGEVFTSMVGLQLWKFN 107

[Close]

BLAST of MC06g0387 vs. NCBI nr
Match: PQQ10613.1 (sodium transporter HKT1-like [Prunus yedoensis var. nudiflora])

HSP 1 Score: 125 bits (315), Expect = 1.48e-31
Identity = 66/89 (74.16%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 1   FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
           FWI+L YF+++S  GF +L  LKPRTDPSFRP NLDLF+TSVSASTVSSMS ++MEVFSN
Sbjct: 19  FWIELVYFVTLSFLGFGVLKALKPRTDPSFRPRNLDLFFTSVSASTVSSMSTVEMEVFSN 78

Query: 61  SQLITLTILMFLGGEIFTSMVGLHLRKFS 89
           +QLI LTILMF+GGE+FTSMVGL L KF 
Sbjct: 79  AQLIILTILMFIGGEVFTSMVGLQLWKFK 107

[Close]

BLAST of MC06g0387 vs. ExPASy TrEMBL
Match: A0A6J1BZB5 (cation transporter HKT8-like OS=Momordica charantia OX=3673 GN=LOC111006975 PE=3 SV=1)

HSP 1 Score: 165 bits (417), Expect = 1.46e-48
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
          FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN
Sbjct: 10 FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 69

Query: 61 SQLITLTILMFLGGEIFTSMVGLHLRKFS 89
          SQLITLTILMFLGGEIFTSMVGLHLRKFS
Sbjct: 70 SQLITLTILMFLGGEIFTSMVGLHLRKFS 98

[Close]

BLAST of MC06g0387 vs. ExPASy TrEMBL
Match: A0A314Z559 (Sodium transporter HKT1-like OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_19541 PE=3 SV=1)

HSP 1 Score: 127 bits (320), Expect = 1.36e-32
Identity = 66/89 (74.16%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 1   FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
           FWI+L YF+++S  GF +L +LKPRTDPSFRP NLDLF+TSVSASTVSSMS ++MEVFSN
Sbjct: 19  FWIELVYFVTLSFLGFGVLKVLKPRTDPSFRPRNLDLFFTSVSASTVSSMSTVEMEVFSN 78

Query: 61  SQLITLTILMFLGGEIFTSMVGLHLRKFS 89
           +QLI LTILMF+GGE+FTSMVGL L KF+
Sbjct: 79  AQLIILTILMFIGGEVFTSMVGLQLWKFN 107

[Close]

BLAST of MC06g0387 vs. ExPASy TrEMBL
Match: A0A314YVB2 (Sodium transporter HKT1-like OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_04681 PE=3 SV=1)

HSP 1 Score: 125 bits (315), Expect = 7.17e-32
Identity = 66/89 (74.16%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 1   FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
           FWI+L YF+++S  GF +L  LKPRTDPSFRP NLDLF+TSVSASTVSSMS ++MEVFSN
Sbjct: 19  FWIELVYFVTLSFLGFGVLKALKPRTDPSFRPRNLDLFFTSVSASTVSSMSTVEMEVFSN 78

Query: 61  SQLITLTILMFLGGEIFTSMVGLHLRKFS 89
           +QLI LTILMF+GGE+FTSMVGL L KF 
Sbjct: 79  AQLIILTILMFIGGEVFTSMVGLQLWKFK 107

[Close]

BLAST of MC06g0387 vs. ExPASy TrEMBL
Match: A0A6P5TDM7 (probable cation transporter HKT6 OS=Prunus avium OX=42229 GN=LOC110766193 PE=3 SV=1)

HSP 1 Score: 125 bits (315), Expect = 8.84e-32
Identity = 66/89 (74.16%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 1   FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
           FWI+L YF+++S  GF +L  LKPRTDPSFRP NLDLF+TSVSASTVSSMS ++MEVFSN
Sbjct: 47  FWIELVYFVTLSFLGFGVLKALKPRTDPSFRPRNLDLFFTSVSASTVSSMSTVEMEVFSN 106

Query: 61  SQLITLTILMFLGGEIFTSMVGLHLRKFS 89
           +QLI LTILMF+GGE+FTSMVGL L KF 
Sbjct: 107 AQLIILTILMFIGGEVFTSMVGLQLWKFK 135

[Close]

BLAST of MC06g0387 vs. ExPASy TrEMBL
Match: A0A4Y1QLH0 (High-affinity K+ transporter 1 OS=Prunus dulcis OX=3755 GN=Prudu_000490 PE=3 SV=1)

HSP 1 Score: 124 bits (312), Expect = 2.06e-31
Identity = 65/89 (73.03%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1   FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
           FWI+L YF+++S  GF +L  LKPRTDPSFRP NLDLF+TSVSASTVSSMS ++MEVFSN
Sbjct: 47  FWIELVYFVTLSFLGFWVLKALKPRTDPSFRPRNLDLFFTSVSASTVSSMSTVEMEVFSN 106

Query: 61  SQLITLTILMFLGGEIFTSMVGLHLRKFS 89
           +QLI LTILMF+GGE+FTSM GL L KF 
Sbjct: 107 AQLIILTILMFIGGEVFTSMFGLQLWKFK 135

[Close]

BLAST of MC06g0387 vs. TAIR 10
Match: AT4G10310.1 (high-affinity K+ transporter 1 )

HSP 1 Score: 91.3 bits (225), Expect = 4.3e-19
Identity = 54/89 (60.67%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 1   FWIQLFYFISISSFGFLILTILKPRTDPSFRPTNLDLFYTSVSASTVSSMSAMKMEVFSN 60
           F++   YF+  S  GFL L I KPRT  + RP + DLF+TSVSA TVSSMS + MEVFSN
Sbjct: 22  FFLYFIYFLFFSFLGFLALKITKPRT--TSRPHDFDLFFTSVSAITVSSMSTVDMEVFSN 81

Query: 61  SQLITLTILMFLGGEIFTSMVGLHLRKFS 90
           +QLI LTILMFLGGEIFTS + L++  F+
Sbjct: 82  TQLIFLTILMFLGGEIFTSFLNLYVSYFT 108

The following BLAST results are available for this feature:

BLAST of MC06g0387 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2WNZ9	2.1e-18	59.52	Cation transporter HKT8 OS=Oryza sativa subsp. indica OX=39946 GN=HKT8 PE=2 SV=2	[more]
Q0JNB6	2.1e-18	59.52	Cation transporter HKT8 OS=Oryza sativa subsp. japonica OX=39947 GN=HKT8 PE=3 SV...	[more]
Q84TI7	6.1e-18	60.67	Sodium transporter HKT1 OS=Arabidopsis thaliana OX=3702 GN=HKT1 PE=1 SV=1	[more]
Q7XPF7	1.7e-15	57.14	Probable cation transporter HKT7 OS=Oryza sativa subsp. japonica OX=39947 GN=HKT...	[more]
Q93XI5	2.8e-15	51.16	Cation transporter HKT2 OS=Oryza sativa subsp. indica OX=39946 GN=HKT2 PE=1 SV=1	[more]

BLAST of MC06g0387 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134790.1	3.01e-48	100.00	cation transporter HKT8-like [Momordica charantia]	[more]
XP_038878278.1	5.08e-36	85.06	cation transporter HKT8-like [Benincasa hispida]	[more]
XP_004150748.3	1.96e-35	82.76	cation transporter HKT8 isoform X1 [Cucumis sativus]	[more]
PQP96795.1	2.80e-32	74.16	sodium transporter HKT1-like [Prunus yedoensis var. nudiflora]	[more]
PQQ10613.1	1.48e-31	74.16	sodium transporter HKT1-like [Prunus yedoensis var. nudiflora]	[more]

BLAST of MC06g0387 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZB5	1.46e-48	100.00	cation transporter HKT8-like OS=Momordica charantia OX=3673 GN=LOC111006975 PE=3...	[more]
A0A314Z559	1.36e-32	74.16	Sodium transporter HKT1-like OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Py...	[more]
A0A314YVB2	7.17e-32	74.16	Sodium transporter HKT1-like OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Py...	[more]
A0A6P5TDM7	8.84e-32	74.16	probable cation transporter HKT6 OS=Prunus avium OX=42229 GN=LOC110766193 PE=3 S...	[more]
A0A4Y1QLH0	2.06e-31	73.03	High-affinity K+ transporter 1 OS=Prunus dulcis OX=3755 GN=Prudu_000490 PE=3 SV=...	[more]

BLAST of MC06g0387 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10310.1	4.3e-19	60.67	high-affinity K+ transporter 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31064	POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED	coord: 1..87
None	No IPR available	PANTHER	PTHR31064:SF29	CATION TRANSPORTER HKT8	coord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0387.1	MC06g0387.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098655	cation transmembrane transport
biological_process	GO:0006813	potassium ion transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008324	cation transmembrane transporter activity