MC06g0379 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0379
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Neuronal acetylcholine receptor subunit alpha
Location	MC06: 3027921 .. 3028088 (-)
RNA-Seq Expression	MC06g0379
Synteny	MC06g0379

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGGAGGAATGGAGGCGCAGAAGAACAAATTTATCGAGGATTGGGGTGCTGCTAGAGAAAATCTAGAGCATAACTTCCGCTGGACTCGCCGCAACTTCGCTCTCGTGGGTATCTTTGGCATCGCCATCCCCCTCCTCGTTTACAAAGGCATCGTCAGGGAATTT

mRNA sequence

ATGGGCGGAGGAATGGAGGCGCAGAAGAACAAATTTATCGAGGATTGGGGTGCTGCTAGAGAAAATCTAGAGCATAACTTCCGCTGGACTCGCCGCAACTTCGCTCTCGTGGGTATCTTTGGCATCGCCATCCCCCTCCTCGTTTACAAAGGCATCGTCAGGGAATTT

Coding sequence (CDS)

ATGGGCGGAGGAATGGAGGCGCAGAAGAACAAATTTATCGAGGATTGGGGTGCTGCTAGAGAAAATCTAGAGCATAACTTCCGCTGGACTCGCCGCAACTTCGCTCTCGTGGGTATCTTTGGCATCGCCATCCCCCTCCTCGTTTACAAAGGCATCGTCAGGGAATTT

Protein sequence

MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF

Homology

[Close]

BLAST of MC06g0379 vs. NCBI nr
Match: XP_022135572.1 (uncharacterized protein LOC111007489 [Momordica charantia])

HSP 1 Score: 120 bits (300), Expect = 5.25e-34
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56
          MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF
Sbjct: 1  MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56

[Close]

BLAST of MC06g0379 vs. NCBI nr
Match: XP_022930869.1 (uncharacterized protein LOC111437222 [Cucurbita moschata] >XP_022970269.1 uncharacterized protein LOC111469278 [Cucurbita maxima] >XP_023529258.1 uncharacterized protein LOC111792156 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117 bits (294), Expect = 4.33e-33
Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56
          MGGGMEAQKN+FIEDWG+ARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF
Sbjct: 1  MGGGMEAQKNRFIEDWGSARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56

[Close]

BLAST of MC06g0379 vs. NCBI nr
Match: XP_018823329.1 (uncharacterized protein LOC108993022 [Juglans regia])

HSP 1 Score: 115 bits (287), Expect = 5.07e-32
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 0


Query: 1  MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56
          MGGGMEA KNKFIEDWG+ARENLEHNFRWTRRNFALVGIFG+A+P+LVYKGIVREF
Sbjct: 1  MGGGMEANKNKFIEDWGSARENLEHNFRWTRRNFALVGIFGLAVPILVYKGIVREF 56

[Close]

BLAST of MC06g0379 vs. NCBI nr
Match: KAG7021671.1 (hypothetical protein SDJN02_15397, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 114 bits (286), Expect = 5.96e-32
Identity = 52/56 (92.86%), Postives = 54/56 (96.43%), Query Frame = 0


Query: 1  MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56
          MGGGME QKN+FIEDWG+ARENLEHNFRWTRRNFALVGIFGI IPLLVYKGIVREF
Sbjct: 1  MGGGMEVQKNRFIEDWGSARENLEHNFRWTRRNFALVGIFGIGIPLLVYKGIVREF 56

[Close]

BLAST of MC06g0379 vs. NCBI nr
Match: KAG6587703.1 (hypothetical protein SDJN03_16268, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 114 bits (286), Expect = 7.20e-32
Identity = 52/56 (92.86%), Postives = 54/56 (96.43%), Query Frame = 0


Query: 1  MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56
          MGGGME QKN+FIEDWG+ARENLEHNFRWTRRNFALVGIFGI IPLLVYKGIVREF
Sbjct: 1  MGGGMEVQKNRFIEDWGSARENLEHNFRWTRRNFALVGIFGIGIPLLVYKGIVREF 56

[Close]

BLAST of MC06g0379 vs. ExPASy TrEMBL
Match: A0A6J1C330 (uncharacterized protein LOC111007489 OS=Momordica charantia OX=3673 GN=LOC111007489 PE=4 SV=1)

HSP 1 Score: 120 bits (300), Expect = 2.54e-34
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56
          MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF
Sbjct: 1  MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56

[Close]

BLAST of MC06g0379 vs. ExPASy TrEMBL
Match: A0A6J1I518 (uncharacterized protein LOC111469278 OS=Cucurbita maxima OX=3661 GN=LOC111469278 PE=4 SV=1)

HSP 1 Score: 117 bits (294), Expect = 2.10e-33
Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56
          MGGGMEAQKN+FIEDWG+ARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF
Sbjct: 1  MGGGMEAQKNRFIEDWGSARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56

[Close]

BLAST of MC06g0379 vs. ExPASy TrEMBL
Match: A0A6J1ESQ6 (uncharacterized protein LOC111437222 OS=Cucurbita moschata OX=3662 GN=LOC111437222 PE=4 SV=1)

HSP 1 Score: 117 bits (294), Expect = 2.10e-33
Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56
          MGGGMEAQKN+FIEDWG+ARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF
Sbjct: 1  MGGGMEAQKNRFIEDWGSARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56

[Close]

BLAST of MC06g0379 vs. ExPASy TrEMBL
Match: A0A2I4EVB0 (uncharacterized protein LOC108993022 OS=Juglans regia OX=51240 GN=LOC108993022 PE=4 SV=1)

HSP 1 Score: 115 bits (287), Expect = 2.45e-32
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 0


Query: 1  MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56
          MGGGMEA KNKFIEDWG+ARENLEHNFRWTRRNFALVGIFG+A+P+LVYKGIVREF
Sbjct: 1  MGGGMEANKNKFIEDWGSARENLEHNFRWTRRNFALVGIFGLAVPILVYKGIVREF 56

[Close]

BLAST of MC06g0379 vs. ExPASy TrEMBL
Match: A0A5D2LQ41 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D03G171800v1 PE=4 SV=1)

HSP 1 Score: 114 bits (286), Expect = 3.49e-32
Identity = 52/56 (92.86%), Postives = 55/56 (98.21%), Query Frame = 0


Query: 1  MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 56
          MGGGMEA KN+FIEDWG+ARENLEHNFRWTRRNFALVGIFGIAIP+LVYKGIVREF
Sbjct: 1  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFALVGIFGIAIPVLVYKGIVREF 56

[Close]

BLAST of MC06g0379 vs. TAIR 10
Match: AT2G31490.1 (unknown protein; Has 55 Blast hits to 55 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 4.3e-25
Identity = 47/56 (83.93%), Postives = 54/56 (96.43%), Query Frame = 0


Query: 1  MGGGMEAQKNKFIEDWGAARENLEHNFRWTRRNFALVGIFGIAIPLLVYKGIVREF 57
          MGGGME  KNKFIEDWG+ARENLEHNFRWTRRNFAL+GIFGIA+P++VYKGIV++F
Sbjct: 1  MGGGMETNKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPIIVYKGIVKDF 56

The following BLAST results are available for this feature:

BLAST of MC06g0379 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g0379 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135572.1	5.25e-34	100.00	uncharacterized protein LOC111007489 [Momordica charantia]	[more]
XP_022930869.1	4.33e-33	96.43	uncharacterized protein LOC111437222 [Cucurbita moschata] >XP_022970269.1 unchar...	[more]
XP_018823329.1	5.07e-32	91.07	uncharacterized protein LOC108993022 [Juglans regia]	[more]
KAG7021671.1	5.96e-32	92.86	hypothetical protein SDJN02_15397, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6587703.1	7.20e-32	92.86	hypothetical protein SDJN03_16268, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC06g0379 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C330	2.54e-34	100.00	uncharacterized protein LOC111007489 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1I518	2.10e-33	96.43	uncharacterized protein LOC111469278 OS=Cucurbita maxima OX=3661 GN=LOC111469278...	[more]
A0A6J1ESQ6	2.10e-33	96.43	uncharacterized protein LOC111437222 OS=Cucurbita moschata OX=3662 GN=LOC1114372...	[more]
A0A2I4EVB0	2.45e-32	91.07	uncharacterized protein LOC108993022 OS=Juglans regia OX=51240 GN=LOC108993022 P...	[more]
A0A5D2LQ41	3.49e-32	92.86	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D03G171800v1 P...	[more]

BLAST of MC06g0379 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31490.1	4.3e-25	83.93	unknown protein; Has 55 Blast hits to 55 proteins in 15 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35479:SF6	BNAA05G11280D PROTEIN	coord: 1..56
None	No IPR available	PANTHER	PTHR35479	UNNAMED PRODUCT	coord: 1..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0379.1	MC06g0379.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005747	mitochondrial respiratory chain complex I