MC06g0378 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0378
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	mitochondrial import receptor subunit TOM7-1-like
Location	MC06: 3024696 .. 3024914 (-)
RNA-Seq Expression	MC06g0378
Synteny	MC06g0378

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGAAGGTTTCTTTTAAGAGCAAGGGCAAGAGCAGCAAGGGCTCATCGAAGTCTTCTGAGGAGAAATCAGCAACCCAGGCCTTCAAGGAGTGGAGCACTTGGGCCGTCAAGAAAGCCAAGGTCATCACTCACTATGGCTTTATTCCTTTGGTCATCATCATCGGCATGAACTCAGAACCAAAGCCTCACCTCTCCCAGCTTCTCAGCCCCGTC

mRNA sequence

ATGGCGTCGAAGGTTTCTTTTAAGAGCAAGGGCAAGAGCAGCAAGGGCTCATCGAAGTCTTCTGAGGAGAAATCAGCAACCCAGGCCTTCAAGGAGTGGAGCACTTGGGCCGTCAAGAAAGCCAAGGTCATCACTCACTATGGCTTTATTCCTTTGGTCATCATCATCGGCATGAACTCAGAACCAAAGCCTCACCTCTCCCAGCTTCTCAGCCCCGTC

Coding sequence (CDS)

ATGGCGTCGAAGGTTTCTTTTAAGAGCAAGGGCAAGAGCAGCAAGGGCTCATCGAAGTCTTCTGAGGAGAAATCAGCAACCCAGGCCTTCAAGGAGTGGAGCACTTGGGCCGTCAAGAAAGCCAAGGTCATCACTCACTATGGCTTTATTCCTTTGGTCATCATCATCGGCATGAACTCAGAACCAAAGCCTCACCTCTCCCAGCTTCTCAGCCCCGTC

Protein sequence

MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNSEPKPHLSQLLSPV

Homology

[Close]

BLAST of MC06g0378 vs. ExPASy Swiss-Prot
Match: Q9ASY8 (Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana OX=3702 GN=TOM7-1 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 5.0e-18
Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 8  KSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNSEPKPHLS 67
          K KGK SKG+S SS++KS     KEW+ W++KKAKV+THYGFIPLVI +GMNS+PKPHL 
Sbjct: 11 KGKGKGSKGAS-SSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGMNSDPKPHLF 70

Query: 68 QLLSPV 74
          QLLSPV
Sbjct: 71 QLLSPV 75

[Close]

BLAST of MC06g0378 vs. ExPASy Swiss-Prot
Match: Q3ECI7 (Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana OX=3702 GN=TOM7-2 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.1e-16
Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 1  MASKVSFKSKGKS--SKGSSKSSEEKSAT--QAFKEWSTWAVKKAKVITHYGFIPLVIII 60
          MA+K + K KGK+  SKGSS SS   +++  + FK+W+ W+++KAKV THYGFIPL+III
Sbjct: 1  MAAKSTLKIKGKAKPSKGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIII 60

Query: 61 GMNSEPKPHLSQLLSPV 74
          GMNS+PKPHL  LLSPV
Sbjct: 61 GMNSDPKPHLFHLLSPV 77

[Close]

BLAST of MC06g0378 vs. ExPASy Swiss-Prot
Match: O82067 (Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum OX=4113 GN=TOM7-1 PE=3 SV=3)

HSP 1 Score: 83.6 bits (205), Expect = 1.0e-15
Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 0


Query: 8  KSKGKSSKGSSKSSEEKSAT----QAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNSEPK 67
          K KGK++K ++ + E+  A     +  KEW TW  KKAKVITHYGFIPLVIIIGMNSEPK
Sbjct: 3  KPKGKNTKKAAAADEDDGAVAVVGKFVKEWGTWTAKKAKVITHYGFIPLVIIIGMNSEPK 62

Query: 68 PHLSQLLSPV 74
          P LSQLLSPV
Sbjct: 63 PSLSQLLSPV 72

[Close]

BLAST of MC06g0378 vs. NCBI nr
Match: XP_022134881.1 (mitochondrial import receptor subunit TOM7-1-like [Momordica charantia])

HSP 1 Score: 139 bits (349), Expect = 3.79e-41
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPHLSQLLSPV 73
          EPKPHLSQLLSPV
Sbjct: 61 EPKPHLSQLLSPV 73

[Close]

BLAST of MC06g0378 vs. NCBI nr
Match: XP_038879584.1 (mitochondrial import receptor subunit TOM7-1-like [Benincasa hispida])

HSP 1 Score: 130 bits (326), Expect = 1.23e-37
Identity = 68/73 (93.15%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVS +SKGKSSKGSSKSSEEKSATQ+FKEW+TWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKGSSKSSEEKSATQSFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPHLSQLLSPV 73
          EPKP LSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of MC06g0378 vs. NCBI nr
Match: XP_008455820.1 (PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Cucumis melo] >TYJ98347.1 mitochondrial import receptor subunit TOM7-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 129 bits (323), Expect = 3.53e-37
Identity = 68/73 (93.15%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 1  MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVS +SKGKSSK SSKSSEEKSATQAFKEW+TWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPHLSQLLSPV 73
          EPKP LSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of MC06g0378 vs. NCBI nr
Match: XP_022921829.1 (mitochondrial import receptor subunit TOM7-1-like [Cucurbita moschata] >XP_022988536.1 mitochondrial import receptor subunit TOM7-1-like [Cucurbita maxima] >XP_023516449.1 mitochondrial import receptor subunit TOM7-1-like [Cucurbita pepo subsp. pepo] >KAG6589655.1 Mitochondrial import receptor subunit TOM7-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023343.1 Mitochondrial import receptor subunit TOM7-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 128 bits (322), Expect = 5.01e-37
Identity = 67/73 (91.78%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 1  MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVS +SKGKSSKGSSKSSE+KS TQAFKEW+TWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPHLSQLLSPV 73
          EPKP LSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of MC06g0378 vs. NCBI nr
Match: XP_004151870.1 (mitochondrial import receptor subunit TOM7-1 [Cucumis sativus])

HSP 1 Score: 128 bits (322), Expect = 5.01e-37
Identity = 67/73 (91.78%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 1  MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVS +SKGKSSK SSKSSEEKSATQAFKEW+TWAVKKAKV+THYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPHLSQLLSPV 73
          EPKP LSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of MC06g0378 vs. ExPASy TrEMBL
Match: A0A6J1BZ09 (mitochondrial import receptor subunit TOM7-1-like OS=Momordica charantia OX=3673 GN=LOC111007032 PE=3 SV=1)

HSP 1 Score: 139 bits (349), Expect = 1.84e-41
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPHLSQLLSPV 73
          EPKPHLSQLLSPV
Sbjct: 61 EPKPHLSQLLSPV 73

[Close]

BLAST of MC06g0378 vs. ExPASy TrEMBL
Match: A0A5D3BGU9 (Mitochondrial import receptor subunit TOM7-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00780 PE=3 SV=1)

HSP 1 Score: 129 bits (323), Expect = 1.71e-37
Identity = 68/73 (93.15%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 1  MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVS +SKGKSSK SSKSSEEKSATQAFKEW+TWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPHLSQLLSPV 73
          EPKP LSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of MC06g0378 vs. ExPASy TrEMBL
Match: A0A1S3C1D2 (mitochondrial import receptor subunit TOM7-1-like OS=Cucumis melo OX=3656 GN=LOC103495918 PE=3 SV=1)

HSP 1 Score: 129 bits (323), Expect = 1.71e-37
Identity = 68/73 (93.15%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 1  MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVS +SKGKSSK SSKSSEEKSATQAFKEW+TWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPHLSQLLSPV 73
          EPKP LSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of MC06g0378 vs. ExPASy TrEMBL
Match: A0A6J1JHG5 (mitochondrial import receptor subunit TOM7-1-like OS=Cucurbita maxima OX=3661 GN=LOC111485747 PE=3 SV=1)

HSP 1 Score: 128 bits (322), Expect = 2.43e-37
Identity = 67/73 (91.78%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 1  MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVS +SKGKSSKGSSKSSE+KS TQAFKEW+TWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPHLSQLLSPV 73
          EPKP LSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of MC06g0378 vs. ExPASy TrEMBL
Match: A0A0A0LN99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G424720 PE=3 SV=1)

HSP 1 Score: 128 bits (322), Expect = 2.43e-37
Identity = 67/73 (91.78%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 1  MASKVSFKSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVS +SKGKSSK SSKSSEEKSATQAFKEW+TWAVKKAKV+THYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPHLSQLLSPV 73
          EPKP LSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of MC06g0378 vs. TAIR 10
Match: AT5G41685.1 (Mitochondrial outer membrane translocase complex, subunit Tom7 )

HSP 1 Score: 91.3 bits (225), Expect = 3.5e-19
Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 8  KSKGKSSKGSSKSSEEKSATQAFKEWSTWAVKKAKVITHYGFIPLVIIIGMNSEPKPHLS 67
          K KGK SKG+S SS++KS     KEW+ W++KKAKV+THYGFIPLVI +GMNS+PKPHL 
Sbjct: 11 KGKGKGSKGAS-SSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGMNSDPKPHLF 70

Query: 68 QLLSPV 74
          QLLSPV
Sbjct: 71 QLLSPV 75

[Close]

BLAST of MC06g0378 vs. TAIR 10
Match: AT1G64220.1 (translocase of outer membrane 7 kDa subunit 2 )

HSP 1 Score: 85.9 bits (211), Expect = 1.5e-17
Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 1  MASKVSFKSKGKS--SKGSSKSSEEKSAT--QAFKEWSTWAVKKAKVITHYGFIPLVIII 60
          MA+K + K KGK+  SKGSS SS   +++  + FK+W+ W+++KAKV THYGFIPL+III
Sbjct: 1  MAAKSTLKIKGKAKPSKGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIII 60

Query: 61 GMNSEPKPHLSQLLSPV 74
          GMNS+PKPHL  LLSPV
Sbjct: 61 GMNSDPKPHLFHLLSPV 77

The following BLAST results are available for this feature:

BLAST of MC06g0378 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASY8	5.0e-18	69.70	Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q3ECI7	2.1e-16	61.04	Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O82067	1.0e-15	65.71	Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum OX=4113 GN=TOM...	[more]

BLAST of MC06g0378 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134881.1	3.79e-41	100.00	mitochondrial import receptor subunit TOM7-1-like [Momordica charantia]	[more]
XP_038879584.1	1.23e-37	93.15	mitochondrial import receptor subunit TOM7-1-like [Benincasa hispida]	[more]
XP_008455820.1	3.53e-37	93.15	PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Cucumis melo] >TYJ...	[more]
XP_022921829.1	5.01e-37	91.78	mitochondrial import receptor subunit TOM7-1-like [Cucurbita moschata] >XP_02298...	[more]
XP_004151870.1	5.01e-37	91.78	mitochondrial import receptor subunit TOM7-1 [Cucumis sativus]	[more]

BLAST of MC06g0378 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZ09	1.84e-41	100.00	mitochondrial import receptor subunit TOM7-1-like OS=Momordica charantia OX=3673...	[more]
A0A5D3BGU9	1.71e-37	93.15	Mitochondrial import receptor subunit TOM7-1-like OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3C1D2	1.71e-37	93.15	mitochondrial import receptor subunit TOM7-1-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1JHG5	2.43e-37	91.78	mitochondrial import receptor subunit TOM7-1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A0A0LN99	2.43e-37	91.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G424720 PE=3 SV=1	[more]

BLAST of MC06g0378 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41685.1	3.5e-19	69.70	Mitochondrial outer membrane translocase complex, subunit Tom7	[more]
AT1G64220.1	1.5e-17	61.04	translocase of outer membrane 7 kDa subunit 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012621	Mitochondrial import receptor subunit TOM7	PFAM	PF08038	Tom7	coord: 31..70 e-value: 1.0E-16 score: 60.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR34944	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7	coord: 1..73
None	No IPR available	PANTHER	PTHR34944:SF2	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0378.1	MC06g0378.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005742	mitochondrial outer membrane translocase complex