MC06g0366 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g0366
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC06: 2941333 .. 2941437 (-)
RNA-Seq ExpressionMC06g0366
SyntenyMC06g0366
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGCATTTCAGGGGGAACCAGCTAGTTTTGGATTCGAGTGGCATTTTACCCCTAACCACAACTCATCTGTTGATTCTTCAACATCATTCGGTTCGAACCTCCACT

mRNA sequence

TCGCATTTCAGGGGGAACCAGCTAGTTTTGGATTCGAGTGGCATTTTACCCCTAACCACAACTCATCTGTTGATTCTTCAACATCATTCGGTTCGAACCTCCACT

Coding sequence (CDS)

TCGCATTTCAGGGGGAACCAGCTAGTTTTGGATTCGAGTGGCATTTTACCCCTAACCACAACTCATCTGTTGATTCTTCAACATCATTCGGTTCGAACCTCCACT

Protein sequence

SHFRGNQLVLDSSGILPLTTTHLLILQHHSVRTST
Homology
BLAST of MC06g0366 vs. NCBI nr
Match: MBA0870840.1 (hypothetical protein [Gossypium schwendimanii])

HSP 1 Score: 55.5 bits (132), Expect = 8.67e-08
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 0

Query: 1   SHFRGNQLVLDSSGILPLTTTHLLILQHHSVRTST 35
           +HF GNQL L SSG+ PLTTTH LILQH SVRTST
Sbjct: 156 THFEGNQLALCSSGVSPLTTTHPLILQHQSVRTST 190

BLAST of MC06g0366 vs. NCBI nr
Match: MBA0569723.1 (hypothetical protein [Gossypium lobatum])

HSP 1 Score: 53.9 bits (128), Expect = 3.32e-07
Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 0

Query: 1   SHFRGNQLVLDSSGILPLTTTHLLILQHHSVRTST 35
           +HF GNQL L SSG+ PLTTTH LILQH SV+TST
Sbjct: 156 THFEGNQLALCSSGVSPLTTTHPLILQHQSVQTST 190

BLAST of MC06g0366 vs. NCBI nr
Match: PLY86165.1 (hypothetical protein LSAT_6X94260 [Lactuca sativa])

HSP 1 Score: 52.8 bits (125), Expect = 5.44e-07
Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 0

Query: 1   SHFRGNQLVLDSSGILPLTTTHLLILQHHSVRTST 35
           +HF  NQL L SSGI PLTTTH LILQH SVRTST
Sbjct: 118 THFGENQLALGSSGISPLTTTHPLILQHQSVRTST 152

BLAST of MC06g0366 vs. NCBI nr
Match: KAG8363221.1 (hypothetical protein BUALT_BualtPtG0005500 [Buddleja alternifolia])

HSP 1 Score: 52.8 bits (125), Expect = 5.44e-07
Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 0

Query: 1   SHFRGNQLVLDSSGILPLTTTHLLILQHHSVRTST 35
           +HF  NQL L SSGI PLTTTH LILQH SVRTST
Sbjct: 118 THFGENQLALGSSGISPLTTTHPLILQHQSVRTST 152

BLAST of MC06g0366 vs. NCBI nr
Match: KAG8369105.1 (hypothetical protein BUALT_Bualt15G0116000 [Buddleja alternifolia])

HSP 1 Score: 52.8 bits (125), Expect = 6.15e-07
Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 0

Query: 1   SHFRGNQLVLDSSGILPLTTTHLLILQHHSVRTST 35
           +HF  NQL L SSGI PLTTTH LILQH SVRTST
Sbjct: 126 THFGENQLALGSSGISPLTTTHPLILQHQSVRTST 160

BLAST of MC06g0366 vs. ExPASy TrEMBL
Match: A0A7J9MIP1 (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_017846 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.20e-08
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 0

Query: 1   SHFRGNQLVLDSSGILPLTTTHLLILQHHSVRTST 35
           +HF GNQL L SSG+ PLTTTH LILQH SVRTST
Sbjct: 156 THFEGNQLALCSSGVSPLTTTHPLILQHQSVRTST 190

BLAST of MC06g0366 vs. ExPASy TrEMBL
Match: A0A7J8MYI7 (Uncharacterized protein OS=Gossypium lobatum OX=34289 GN=Golob_003435 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.61e-07
Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 0

Query: 1   SHFRGNQLVLDSSGILPLTTTHLLILQHHSVRTST 35
           +HF GNQL L SSG+ PLTTTH LILQH SV+TST
Sbjct: 156 THFEGNQLALCSSGVSPLTTTHPLILQHQSVQTST 190

BLAST of MC06g0366 vs. ExPASy TrEMBL
Match: A0A2J6LFT8 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_6X94260 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.63e-07
Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 0

Query: 1   SHFRGNQLVLDSSGILPLTTTHLLILQHHSVRTST 35
           +HF  NQL L SSGI PLTTTH LILQH SVRTST
Sbjct: 118 THFGENQLALGSSGISPLTTTHPLILQHQSVRTST 152

BLAST of MC06g0366 vs. ExPASy TrEMBL
Match: J3LNA6 (Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 3.10e-07
Identity = 26/34 (76.47%), Postives = 27/34 (79.41%), Query Frame = 0

Query: 1  SHFRGNQLVLDSSGILPLTTTHLLILQHHSVRTS 34
          +HF  NQL L SSGI PLTTTH LILQH SVRTS
Sbjct: 55 THFGENQLALGSSGISPLTTTHPLILQHQSVRTS 88

BLAST of MC06g0366 vs. ExPASy TrEMBL
Match: I1QKX6 (Uncharacterized protein OS=Oryza glaberrima OX=4538 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 5.93e-07
Identity = 26/34 (76.47%), Postives = 27/34 (79.41%), Query Frame = 0

Query: 1   SHFRGNQLVLDSSGILPLTTTHLLILQHHSVRTS 34
           +HF  NQL L SSGI PLTTTH LILQH SVRTS
Sbjct: 86  THFGENQLALGSSGISPLTTTHPLILQHQSVRTS 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
MBA0870840.18.67e-0877.14hypothetical protein [Gossypium schwendimanii][more]
MBA0569723.13.32e-0774.29hypothetical protein [Gossypium lobatum][more]
PLY86165.15.44e-0777.14hypothetical protein LSAT_6X94260 [Lactuca sativa][more]
KAG8363221.15.44e-0777.14hypothetical protein BUALT_BualtPtG0005500 [Buddleja alternifolia][more]
KAG8369105.16.15e-0777.14hypothetical protein BUALT_Bualt15G0116000 [Buddleja alternifolia][more]
Match NameE-valueIdentityDescription
A0A7J9MIP14.20e-0877.14Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_017846 PE=4... [more]
A0A7J8MYI71.61e-0774.29Uncharacterized protein OS=Gossypium lobatum OX=34289 GN=Golob_003435 PE=4 SV=1[more]
A0A2J6LFT82.63e-0777.14Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_6X94260 PE=4 SV=1[more]
J3LNA63.10e-0776.47Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1[more]
I1QKX65.93e-0776.47Uncharacterized protein OS=Oryza glaberrima OX=4538 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g0366.1MC06g0366.1mRNA