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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGGATGGGGAGGATCAAAAGATCATATGAGAGGCTAAGAAGTGAAAATGCAGAAGAAGAAGGAGAAGAATATGATGATGATGATGAACAGAAGAAGAAGAAGAATAATCCAAGAAGAAGCATTAAAGTTGCAGTTGCAGAGCTATGGAAGAAAATGGACGAAGGAAAGCCAAAATTAGGGCTGCCCTTTAAGAGCTTCATTGCTACTTATGAAACAATGATGCTTTGTTTTGCCCACAATCTTGTGCTCTCTCAACAATGG mRNA sequence ATGAGGATGGGGAGGATCAAAAGATCATATGAGAGGCTAAGAAGTGAAAATGCAGAAGAAGAAGGAGAAGAATATGATGATGATGATGAACAGAAGAAGAAGAAGAATAATCCAAGAAGAAGCATTAAAGTTGCAGTTGCAGAGCTATGGAAGAAAATGGACGAAGGAAAGCCAAAATTAGGGCTGCCCTTTAAGAGCTTCATTGCTACTTATGAAACAATGATGCTTTGTTTTGCCCACAATCTTGTGCTCTCTCAACAATGG Coding sequence (CDS) ATGAGGATGGGGAGGATCAAAAGATCATATGAGAGGCTAAGAAGTGAAAATGCAGAAGAAGAAGGAGAAGAATATGATGATGATGATGAACAGAAGAAGAAGAAGAATAATCCAAGAAGAAGCATTAAAGTTGCAGTTGCAGAGCTATGGAAGAAAATGGACGAAGGAAAGCCAAAATTAGGGCTGCCCTTTAAGAGCTTCATTGCTACTTATGAAACAATGATGCTTTGTTTTGCCCACAATCTTGTGCTCTCTCAACAATGG Protein sequence MRMGRIKRSYERLRSENAEEEGEEYDDDDEQKKKKNNPRRSIKVAVAELWKKMDEGKPKLGLPFKSFIATYETMMLCFAHNLVLSQQW
Homology
BLAST of MC06g0330 vs. NCBI nr
Match: KAG6587665.1 (hypothetical protein SDJN03_16230, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 70.5 bits (171), Expect = 1.42e-13 Identity = 47/97 (48.45%), Postives = 57/97 (58.76%), Query Frame = 0
Query: 3 MGRIKRSYERLRSENAEEEGEEYDDDDEQKKKKNNP-----------RRSIKVAVAELWK 62
MG+ +R YERLR E++E D+EQ KN+ RR V ELWK
Sbjct: 1 MGKGRRRYERLRRESSEV-------DEEQNHIKNSAITLGGGGGWKGRRRSNQGV-ELWK 60
Query: 63 KMDEGKPKLGLPFKSFIATYETMMLCFAHNLVLSQQW 88
KM+ PKLG PFK+FIATYE +ML FAH LV+ QQW
Sbjct: 61 KMEGSSPKLGHPFKTFIATYEAIMLYFAHKLVMPQQW 89
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| KAG6587665.1 | 1.42e-13 | 48.45 | hypothetical protein SDJN03_16230, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 3..23 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..19 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..39 |
Relationships
The following mRNA feature(s) are a part of this gene:
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