MC06g0317 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0317
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	VQ domain-containing protein
Location	MC06: 2523983 .. 2524720 (+)
RNA-Seq Expression	MC06g0317
Synteny	MC06g0317

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCCTCAACAGCTCCATGGGAAGAGGGATAATGGCAGTACCACCGCCAATAATGGCAACGGCAATGGCAATGGATTGTGTCCGCCTCCGTTGAAGATCAATAAGGATTCTCATTTCATCAGAAAATCCTCGTCGTCTTCCTCTTCTCCTTCCTCGTCTTCCTCTTCCACCTCGTCGCTCGTCAATGGCGTCGTAGGCGCCGGCTGCGCCAAGCCGCCGCAGCGGCATCCGGTGATTATATACACGCATTCTCCCAAAATCATCCACACGCATCCTCGAGACTTCATGGCGTTGGTTCAGAAGCTCACCGGATTGTCTCGCTCCGATGACGAAGCGGGAGCTAATTCTCCGAACGCGACGAAATGTGGCGAGGAGAATAAAATCATTAGCTCCAAAGTCGTGGTGACGAGTGACGATAATGAGTCGTCGTCCGTTGTGACGACGGATGAAAATTGCTGCGGCAGCGGCGTGGTGGAAGGTCAGGTTAATTCGTGTTTCGCTCCGCCGATGTTCGAGCCACCGCCGCCGCCACCGCCACCGCAAGTAGCGAGTTCTTACCTAACGAACATCCCTGTTTACAGGCCGAATTCGACGGACTTTTTGTGCTCTAATCATCAACCGTTTTTTAACTACAACGATTCTTCTTTGCTTTTTGGTGCTCCAAATATCCATTCTCTTTCGTCCGCTAATTCAACATTGAATGGAATTAATGATTTCTGCGACTATAGCGAATAT

mRNA sequence

ATGAGCCCTCAACAGCTCCATGGGAAGAGGGATAATGGCAGTACCACCGCCAATAATGGCAACGGCAATGGCAATGGATTGTGTCCGCCTCCGTTGAAGATCAATAAGGATTCTCATTTCATCAGAAAATCCTCGTCGTCTTCCTCTTCTCCTTCCTCGTCTTCCTCTTCCACCTCGTCGCTCGTCAATGGCGTCGTAGGCGCCGGCTGCGCCAAGCCGCCGCAGCGGCATCCGGTGATTATATACACGCATTCTCCCAAAATCATCCACACGCATCCTCGAGACTTCATGGCGTTGGTTCAGAAGCTCACCGGATTGTCTCGCTCCGATGACGAAGCGGGAGCTAATTCTCCGAACGCGACGAAATGTGGCGAGGAGAATAAAATCATTAGCTCCAAAGTCGTGGTGACGAGTGACGATAATGAGTCGTCGTCCGTTGTGACGACGGATGAAAATTGCTGCGGCAGCGGCGTGGTGGAAGGTCAGGTTAATTCGTGTTTCGCTCCGCCGATGTTCGAGCCACCGCCGCCGCCACCGCCACCGCAAGTAGCGAGTTCTTACCTAACGAACATCCCTGTTTACAGGCCGAATTCGACGGACTTTTTGTGCTCTAATCATCAACCGTTTTTTAACTACAACGATTCTTCTTTGCTTTTTGGTGCTCCAAATATCCATTCTCTTTCGTCCGCTAATTCAACATTGAATGGAATTAATGATTTCTGCGACTATAGCGAATAT

Coding sequence (CDS)

ATGAGCCCTCAACAGCTCCATGGGAAGAGGGATAATGGCAGTACCACCGCCAATAATGGCAACGGCAATGGCAATGGATTGTGTCCGCCTCCGTTGAAGATCAATAAGGATTCTCATTTCATCAGAAAATCCTCGTCGTCTTCCTCTTCTCCTTCCTCGTCTTCCTCTTCCACCTCGTCGCTCGTCAATGGCGTCGTAGGCGCCGGCTGCGCCAAGCCGCCGCAGCGGCATCCGGTGATTATATACACGCATTCTCCCAAAATCATCCACACGCATCCTCGAGACTTCATGGCGTTGGTTCAGAAGCTCACCGGATTGTCTCGCTCCGATGACGAAGCGGGAGCTAATTCTCCGAACGCGACGAAATGTGGCGAGGAGAATAAAATCATTAGCTCCAAAGTCGTGGTGACGAGTGACGATAATGAGTCGTCGTCCGTTGTGACGACGGATGAAAATTGCTGCGGCAGCGGCGTGGTGGAAGGTCAGGTTAATTCGTGTTTCGCTCCGCCGATGTTCGAGCCACCGCCGCCGCCACCGCCACCGCAAGTAGCGAGTTCTTACCTAACGAACATCCCTGTTTACAGGCCGAATTCGACGGACTTTTTGTGCTCTAATCATCAACCGTTTTTTAACTACAACGATTCTTCTTTGCTTTTTGGTGCTCCAAATATCCATTCTCTTTCGTCCGCTAATTCAACATTGAATGGAATTAATGATTTCTGCGACTATAGCGAATAT

Protein sequence

MSPQQLHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSSSSPSSSSSSTSSLVNGVVGAGCAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDEAGANSPNATKCGEENKIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQVNSCFAPPMFEPPPPPPPPQVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSSANSTLNGINDFCDYSEY

Homology

[Close]

BLAST of MC06g0317 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.1e-28
Identity = 105/265 (39.62%), Postives = 139/265 (52.45%), Query Frame = 0


Query: 29  PPPLKINKDSHFIRKSSSSSSSPSSSSSSTSSLVNGVVGAGCAKPPQRHPVIIYTHSPKI 88
           PP LK+NKDSH I+K      SPSS SS+             AKP  RHPVIIYTH+P+I
Sbjct: 43  PPTLKVNKDSHVIKK----PPSPSSFSSA-------------AKP--RHPVIIYTHTPRI 102

Query: 89  IHTHPRDFMALVQKLTGLSRSDDEAGANSP-----------------------NATKCGE 148
           IHT+P+DFMALVQKLTG++ SD++ G  +                        N  +CG 
Sbjct: 103 IHTNPKDFMALVQKLTGMTHSDEDLGGGNAMTDPGVVKSINRTVSEPTVDRKNNRNRCGG 162

Query: 149 EN------------KIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQV--NSCFAPPM 208
            N            K I     + S+D+ESSSV+TT+EN    G V   +  ++   PP 
Sbjct: 163 GNNYLRNYSGAGNGKGIFFNNTMISEDSESSSVITTEENIGEHGQVNSSLPYSAVAIPPQ 222

Query: 209 --FEPPPPPPPPQV-------ASSYLTNIPVYRP-NSTD-FLCSNHQPFFNYNDSSLLFG 244
               PPPPPPPP +         +YL   P++ P N  D FLC N QPF N++D   LF 
Sbjct: 223 PPPHPPPPPPPPSMYDAAGINYGAYLPTFPIFPPANPADNFLCGN-QPFANFDDP--LFF 282

[Close]

BLAST of MC06g0317 vs. ExPASy Swiss-Prot
Match: Q9CA36 (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.3e-06
Identity = 43/120 (35.83%), Postives = 59/120 (49.17%), Query Frame = 0


Query: 25  NGLCPPPLKINKDSHFIRKSSSSSSSPSSSSSSTSSLVNGVVGAGCAKPPQRHPVIIYTH 84
           NG  P  LK+  +SH I+K+SS  S P     ++                   PVIIY H
Sbjct: 10  NGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRAS-------------------PVIIYAH 69

Query: 85  SPKIIHTHPRDFMALVQKLTGLSRSDDEAGANSPNATKCGEENKIISSKVVVTSDDNESS 144
           SPK+IHT   DFMALVQ+LTGL   D+    N+       E +  + ++ V   DDN ++
Sbjct: 70  SPKVIHTRAEDFMALVQRLTGL---DEIIRRNT------SESSSSVVTEEVNVGDDNTAA 101

[Close]

BLAST of MC06g0317 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.7e-04
Identity = 34/105 (32.38%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 29  PPPLKINKDSH-FIRKSSSSSSSPSSSSSSTSSLVNGVVGAGCAKPPQRHPVIIYTHSPK 88
           P PLK+  DSH  I+K   +   P      T            ++PP   PV IYT +P+
Sbjct: 16  PTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQ-----QEPSQSRPPP-GPVNIYTVTPR 75

Query: 89  IIHTHPRDFMALVQKLTGLSRSDDEAGANSPNATKCGEENKIISS 133
           IIHTHP +FM LVQ+LTG + +   + ++S + ++  + + ++ +
Sbjct: 76  IIHTHPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTMVDT 114

[Close]

BLAST of MC06g0317 vs. NCBI nr
Match: XP_022135386.1 (VQ motif-containing protein 20 [Momordica charantia])

HSP 1 Score: 489 bits (1259), Expect = 2.67e-174
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MSPQQLHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSSSSPSSSSSSTSS 60
           MSPQQLHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSSSSPSSSSSSTSS
Sbjct: 1   MSPQQLHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSSSSPSSSSSSTSS 60

Query: 61  LVNGVVGAGCAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDEAGANSPNA 120
           LVNGVVGAGCAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDEAGANSPNA
Sbjct: 61  LVNGVVGAGCAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDEAGANSPNA 120

Query: 121 TKCGEENKIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQVNSCFAPPMFEPPPPPPP 180
           TKCGEENKIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQVNSCFAPPMFEPPPPPPP
Sbjct: 121 TKCGEENKIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQVNSCFAPPMFEPPPPPPP 180

Query: 181 PQVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSSANSTLNGINDF 240
           PQVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSSANSTLNGINDF
Sbjct: 181 PQVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSSANSTLNGINDF 240

Query: 241 CDYSEY 246
           CDYSEY
Sbjct: 241 CDYSEY 246

[Close]

BLAST of MC06g0317 vs. NCBI nr
Match: XP_023007145.1 (VQ motif-containing protein 20-like [Cucurbita maxima])

HSP 1 Score: 333 bits (853), Expect = 1.58e-112
Identity = 198/254 (77.95%), Postives = 212/254 (83.46%), Query Frame = 0


Query: 1   MSPQQ-LHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSSS-SPSSSSSST 60
           MSPQQ L+GKRD  +   NN   N   LCPPPLKINKDSHFIRKSSSS+S SPSSSSSST
Sbjct: 1   MSPQQPLNGKRDQSTANTNN---NAKVLCPPPLKINKDSHFIRKSSSSNSASPSSSSSST 60

Query: 61  SS-LVNGVVGA----GCAKPP-QRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDE 120
           SS LVNGV  A    G AKPP QRHPVIIYTHSPKIIHTHPRDFMALVQKLTG+SRSD+E
Sbjct: 61  SSQLVNGVAAAVAVAGSAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEE 120

Query: 121 AGANSPNATKCGEENKIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQVNSCFAPPMF 180
           A   SP ATK G+EN    SKVVV SDDNESSSVVT +ENCC  GVVEGQVNSCFAPP+F
Sbjct: 121 A---SPKATKSGDENNK-GSKVVV-SDDNESSSVVT-EENCCSGGVVEGQVNSCFAPPIF 180

Query: 181 EPPPPPPPPQVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSSANS 240
           EPPPPPP  Q+A+SYLTNIPVYRPNST+FLCSN QPFFNY+DS LLFGAPNI SL+S NS
Sbjct: 181 EPPPPPP--QLANSYLTNIPVYRPNSTEFLCSN-QPFFNYDDS-LLFGAPNIQSLASTNS 240

Query: 241 TLNGINDFCDYSEY 246
           TLNGINDFC+Y EY
Sbjct: 241 TLNGINDFCEYGEY 241

[Close]

BLAST of MC06g0317 vs. NCBI nr
Match: KAG7021613.1 (VQ motif-containing protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331 bits (849), Expect = 6.40e-112
Identity = 195/254 (76.77%), Postives = 209/254 (82.28%), Query Frame = 0


Query: 1   MSPQQ-LHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSSS-SPSSSSSST 60
           MSPQQ L+GKRD  +   NN   N   LCPPPLKINKDSHFIRKSSSS+S SPSSSSSST
Sbjct: 1   MSPQQPLNGKRDQSTANTNN---NAKVLCPPPLKINKDSHFIRKSSSSNSTSPSSSSSST 60

Query: 61  SS-LVNGVVGA----GCAKPP-QRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDE 120
           SS LVNG+  A    G  KPP QRHPVIIYTHSPKIIHTHPRDFMALVQKLTG+SRSD+E
Sbjct: 61  SSQLVNGIAAAVAVAGSVKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEE 120

Query: 121 AGANSPNATKCGEENKIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQVNSCFAPPMF 180
           A   SP ATK G+EN   S  VV  SDDNESSSVVT DENCC  GVVEGQVNSCFAPP+F
Sbjct: 121 A---SPKATKSGDENNKGSKAVV--SDDNESSSVVT-DENCCSGGVVEGQVNSCFAPPIF 180

Query: 181 EPPPPPPPPQVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSSANS 240
           EPPPPPP  Q+A+SYLTNIPVYRPNST+FLCSN QPFFNY+DS LLFGAPNI SL+S NS
Sbjct: 181 EPPPPPP--QLANSYLTNIPVYRPNSTEFLCSN-QPFFNYDDS-LLFGAPNIQSLASTNS 240

Query: 241 TLNGINDFCDYSEY 246
           TLNGINDFC+Y EY
Sbjct: 241 TLNGINDFCEYGEY 241

[Close]

BLAST of MC06g0317 vs. NCBI nr
Match: XP_022933476.1 (VQ motif-containing protein 20-like [Cucurbita moschata])

HSP 1 Score: 330 bits (846), Expect = 1.83e-111
Identity = 195/254 (76.77%), Postives = 209/254 (82.28%), Query Frame = 0


Query: 1   MSPQQ-LHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSSS-SPSSSSSST 60
           MSPQQ L+GKRD  +   NN   N   LCPPPLKINKDSHFIRKSSSS+S SPSSSSSST
Sbjct: 1   MSPQQPLNGKRDQSTANTNN---NAKVLCPPPLKINKDSHFIRKSSSSNSTSPSSSSSST 60

Query: 61  SS-LVNGVVGA----GCAKPP-QRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDE 120
           SS LVNGV  A    G  KPP QRHPVIIYTHSPKIIHTHPRDFMALVQKLTG+SRSD+E
Sbjct: 61  SSQLVNGVAAAVAVAGSVKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEE 120

Query: 121 AGANSPNATKCGEENKIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQVNSCFAPPMF 180
           A   SP ATK G+EN   S  VV  SDDNESSSVVT +ENCC  GVVEGQVNSCFAPP+F
Sbjct: 121 A---SPKATKSGDENNKGSKAVV--SDDNESSSVVT-EENCCSGGVVEGQVNSCFAPPIF 180

Query: 181 EPPPPPPPPQVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSSANS 240
           EPPPPPP  Q+A+SYLTNIPVYRPNST+FLCSN QPFFNY+DS LLFGAPNI SL+S NS
Sbjct: 181 EPPPPPP--QLANSYLTNIPVYRPNSTEFLCSN-QPFFNYDDS-LLFGAPNIQSLASTNS 240

Query: 241 TLNGINDFCDYSEY 246
           TLNGINDFC+Y EY
Sbjct: 241 TLNGINDFCEYGEY 241

[Close]

BLAST of MC06g0317 vs. NCBI nr
Match: KAG6587652.1 (VQ motif-containing protein 20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 329 bits (844), Expect = 3.69e-111
Identity = 192/254 (75.59%), Postives = 208/254 (81.89%), Query Frame = 0


Query: 1   MSPQQ-LHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSSS-SPSSSSSST 60
           MSPQQ L+GKRD  +   NN   N   LCPPPLKINKDSHFIRKSSSS+S SPSSSSSST
Sbjct: 1   MSPQQPLNGKRDQSTANTNN---NAKVLCPPPLKINKDSHFIRKSSSSNSTSPSSSSSST 60

Query: 61  SS-LVNGV-----VGAGCAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDE 120
           SS LVNG+     V +    PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTG+SRSD+E
Sbjct: 61  SSQLVNGIAAAVAVASSVKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEE 120

Query: 121 AGANSPNATKCGEENKIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQVNSCFAPPMF 180
           A   SP ATK G+EN   S  VV  SDDNESSSVVT +ENCC  GVVEGQVNSCFAPP+F
Sbjct: 121 A---SPKATKSGDENNKGSKAVV--SDDNESSSVVT-EENCCSGGVVEGQVNSCFAPPIF 180

Query: 181 EPPPPPPPPQVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSSANS 240
           EPPPPPP  Q+A+SYLTNIPVYRPNST+FLCSN QPFFNY+DS LLFGAPNI SL+S NS
Sbjct: 181 EPPPPPP--QLANSYLTNIPVYRPNSTEFLCSN-QPFFNYDDS-LLFGAPNIQSLASTNS 240

Query: 241 TLNGINDFCDYSEY 246
           TLNGINDFC+Y EY
Sbjct: 241 TLNGINDFCEYGEY 241

[Close]

BLAST of MC06g0317 vs. ExPASy TrEMBL
Match: A0A6J1C0L6 (VQ motif-containing protein 20 OS=Momordica charantia OX=3673 GN=LOC111007349 PE=4 SV=1)

HSP 1 Score: 489 bits (1259), Expect = 1.29e-174
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MSPQQLHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSSSSPSSSSSSTSS 60
           MSPQQLHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSSSSPSSSSSSTSS
Sbjct: 1   MSPQQLHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSSSSPSSSSSSTSS 60

Query: 61  LVNGVVGAGCAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDEAGANSPNA 120
           LVNGVVGAGCAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDEAGANSPNA
Sbjct: 61  LVNGVVGAGCAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDEAGANSPNA 120

Query: 121 TKCGEENKIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQVNSCFAPPMFEPPPPPPP 180
           TKCGEENKIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQVNSCFAPPMFEPPPPPPP
Sbjct: 121 TKCGEENKIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQVNSCFAPPMFEPPPPPPP 180

Query: 181 PQVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSSANSTLNGINDF 240
           PQVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSSANSTLNGINDF
Sbjct: 181 PQVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSSANSTLNGINDF 240

Query: 241 CDYSEY 246
           CDYSEY
Sbjct: 241 CDYSEY 246

[Close]

BLAST of MC06g0317 vs. ExPASy TrEMBL
Match: A0A6J1L266 (VQ motif-containing protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111499724 PE=4 SV=1)

HSP 1 Score: 333 bits (853), Expect = 7.63e-113
Identity = 198/254 (77.95%), Postives = 212/254 (83.46%), Query Frame = 0


Query: 1   MSPQQ-LHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSSS-SPSSSSSST 60
           MSPQQ L+GKRD  +   NN   N   LCPPPLKINKDSHFIRKSSSS+S SPSSSSSST
Sbjct: 1   MSPQQPLNGKRDQSTANTNN---NAKVLCPPPLKINKDSHFIRKSSSSNSASPSSSSSST 60

Query: 61  SS-LVNGVVGA----GCAKPP-QRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDE 120
           SS LVNGV  A    G AKPP QRHPVIIYTHSPKIIHTHPRDFMALVQKLTG+SRSD+E
Sbjct: 61  SSQLVNGVAAAVAVAGSAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEE 120

Query: 121 AGANSPNATKCGEENKIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQVNSCFAPPMF 180
           A   SP ATK G+EN    SKVVV SDDNESSSVVT +ENCC  GVVEGQVNSCFAPP+F
Sbjct: 121 A---SPKATKSGDENNK-GSKVVV-SDDNESSSVVT-EENCCSGGVVEGQVNSCFAPPIF 180

Query: 181 EPPPPPPPPQVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSSANS 240
           EPPPPPP  Q+A+SYLTNIPVYRPNST+FLCSN QPFFNY+DS LLFGAPNI SL+S NS
Sbjct: 181 EPPPPPP--QLANSYLTNIPVYRPNSTEFLCSN-QPFFNYDDS-LLFGAPNIQSLASTNS 240

Query: 241 TLNGINDFCDYSEY 246
           TLNGINDFC+Y EY
Sbjct: 241 TLNGINDFCEYGEY 241

[Close]

BLAST of MC06g0317 vs. ExPASy TrEMBL
Match: A0A6J1EZ55 (VQ motif-containing protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111440881 PE=4 SV=1)

HSP 1 Score: 330 bits (846), Expect = 8.86e-112
Identity = 195/254 (76.77%), Postives = 209/254 (82.28%), Query Frame = 0


Query: 1   MSPQQ-LHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSSS-SPSSSSSST 60
           MSPQQ L+GKRD  +   NN   N   LCPPPLKINKDSHFIRKSSSS+S SPSSSSSST
Sbjct: 1   MSPQQPLNGKRDQSTANTNN---NAKVLCPPPLKINKDSHFIRKSSSSNSTSPSSSSSST 60

Query: 61  SS-LVNGVVGA----GCAKPP-QRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDE 120
           SS LVNGV  A    G  KPP QRHPVIIYTHSPKIIHTHPRDFMALVQKLTG+SRSD+E
Sbjct: 61  SSQLVNGVAAAVAVAGSVKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEE 120

Query: 121 AGANSPNATKCGEENKIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQVNSCFAPPMF 180
           A   SP ATK G+EN   S  VV  SDDNESSSVVT +ENCC  GVVEGQVNSCFAPP+F
Sbjct: 121 A---SPKATKSGDENNKGSKAVV--SDDNESSSVVT-EENCCSGGVVEGQVNSCFAPPIF 180

Query: 181 EPPPPPPPPQVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSSANS 240
           EPPPPPP  Q+A+SYLTNIPVYRPNST+FLCSN QPFFNY+DS LLFGAPNI SL+S NS
Sbjct: 181 EPPPPPP--QLANSYLTNIPVYRPNSTEFLCSN-QPFFNYDDS-LLFGAPNIQSLASTNS 240

Query: 241 TLNGINDFCDYSEY 246
           TLNGINDFC+Y EY
Sbjct: 241 TLNGINDFCEYGEY 241

[Close]

BLAST of MC06g0317 vs. ExPASy TrEMBL
Match: A0A0A0LKA6 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=1)

HSP 1 Score: 288 bits (738), Expect = 2.04e-95
Identity = 178/254 (70.08%), Postives = 197/254 (77.56%), Query Frame = 0


Query: 1   MSPQQ---LHGKRDNGSTTANNGNGNGNGLCPPPL-KINKDSHFIRKSSSSS--SSPSSS 60
           MSPQQ   +HGKRDN   T NN N     L PPPL KINKDSH IRKSSSSS  SSPSSS
Sbjct: 1   MSPQQQQQIHGKRDN--QTNNNAN---KPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSS 60

Query: 61  SSSTSSLVNGVVGAGCAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDEAG 120
           SSST+SL+NGV+    AKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTG+SRSDDEA 
Sbjct: 61  SSSTTSLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120

Query: 121 ANSPNATKCGEENKIISSKVVVTSDDNESSSVVTTDENCCG----SGVVEG-QVNSCFAP 180
             +   +   E NK  +SKVV  +DDNESSSVVTTDENCCG    SG VEG QVNSCF P
Sbjct: 121 TKATAKSVVDENNK--ASKVV--NDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGP 180

Query: 181 PMFEPPPPPPPPQVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSS 240
            +FEPPPPPPPPQ+ASSYL+NIPVY PNST+FLC N QP FNY+DS LLFG+ NI SLSS
Sbjct: 181 AIFEPPPPPPPPQLASSYLSNIPVYGPNSTEFLCGN-QPIFNYDDS-LLFGS-NIPSLSS 237

Query: 241 ANSTLNGINDFCDY 243
                NG++DF ++
Sbjct: 241 -----NGVSDFSEF 237

[Close]

BLAST of MC06g0317 vs. ExPASy TrEMBL
Match: A0A1S3BCI6 (VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4 SV=1)

HSP 1 Score: 277 bits (709), Expect = 5.36e-91
Identity = 178/256 (69.53%), Postives = 192/256 (75.00%), Query Frame = 0


Query: 1   MSPQ----QLHGKRDNGSTTANNGNGNGNGLCPPPLKINKDSHFIRKSSSSS--SSPSSS 60
           MSPQ    Q+HGKRDN     NN N     L PP LKINKDSH IRKSSSSS  SSPSSS
Sbjct: 1   MSPQHQQQQIHGKRDN--QINNNAN---KPLSPPSLKINKDSHLIRKSSSSSNTSSPSSS 60

Query: 61  SSSTSSLVNGVVGAGCAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDEAG 120
           SSST+SLVNGV  A  AKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTG+SRSDDEA 
Sbjct: 61  SSSTTSLVNGVPTA-VAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120

Query: 121 ANSPNATKCGEENKIISSKVVVTSDDNESSSVVTTDENCCG----SGVVEG-QVNSCFAP 180
             +  A    E NKI  SKVV  +DDNESSSV+TTDENCC     SG VEG QVNSCF P
Sbjct: 121 TKA-TAKSVDENNKI--SKVV--NDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGP 180

Query: 181 PMFEPPPPPPPP--QVASSYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSL 240
             FEPPPPPPPP  Q+A+SYLTN+PVY PNST+FLC N QP FNY+DS LLFG  NI SL
Sbjct: 181 ASFEPPPPPPPPPPQLANSYLTNMPVYGPNSTEFLCGN-QPIFNYDDS-LLFGGSNIPSL 238

Query: 241 SSANSTLNGINDFCDY 243
           SS     NGI+DF ++
Sbjct: 241 SS-----NGISDFSEF 238

[Close]

BLAST of MC06g0317 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-29
Identity = 105/265 (39.62%), Postives = 139/265 (52.45%), Query Frame = 0


Query: 29  PPPLKINKDSHFIRKSSSSSSSPSSSSSSTSSLVNGVVGAGCAKPPQRHPVIIYTHSPKI 88
           PP LK+NKDSH I+K      SPSS SS+             AKP  RHPVIIYTH+P+I
Sbjct: 43  PPTLKVNKDSHVIKK----PPSPSSFSSA-------------AKP--RHPVIIYTHTPRI 102

Query: 89  IHTHPRDFMALVQKLTGLSRSDDEAGANSP-----------------------NATKCGE 148
           IHT+P+DFMALVQKLTG++ SD++ G  +                        N  +CG 
Sbjct: 103 IHTNPKDFMALVQKLTGMTHSDEDLGGGNAMTDPGVVKSINRTVSEPTVDRKNNRNRCGG 162

Query: 149 EN------------KIISSKVVVTSDDNESSSVVTTDENCCGSGVVEGQV--NSCFAPPM 208
            N            K I     + S+D+ESSSV+TT+EN    G V   +  ++   PP 
Sbjct: 163 GNNYLRNYSGAGNGKGIFFNNTMISEDSESSSVITTEENIGEHGQVNSSLPYSAVAIPPQ 222

Query: 209 --FEPPPPPPPPQV-------ASSYLTNIPVYRP-NSTD-FLCSNHQPFFNYNDSSLLFG 244
               PPPPPPPP +         +YL   P++ P N  D FLC N QPF N++D   LF 
Sbjct: 223 PPPHPPPPPPPPSMYDAAGINYGAYLPTFPIFPPANPADNFLCGN-QPFANFDDP--LFF 282

[Close]

BLAST of MC06g0317 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-07
Identity = 43/120 (35.83%), Postives = 59/120 (49.17%), Query Frame = 0


Query: 25  NGLCPPPLKINKDSHFIRKSSSSSSSPSSSSSSTSSLVNGVVGAGCAKPPQRHPVIIYTH 84
           NG  P  LK+  +SH I+K+SS  S P     ++                   PVIIY H
Sbjct: 10  NGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRAS-------------------PVIIYAH 69

Query: 85  SPKIIHTHPRDFMALVQKLTGLSRSDDEAGANSPNATKCGEENKIISSKVVVTSDDNESS 144
           SPK+IHT   DFMALVQ+LTGL   D+    N+       E +  + ++ V   DDN ++
Sbjct: 70  SPKVIHTRAEDFMALVQRLTGL---DEIIRRNT------SESSSSVVTEEVNVGDDNTAA 101

[Close]

BLAST of MC06g0317 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 49.3 bits (116), Expect = 5.2e-06
Identity = 36/94 (38.30%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 29  PPPLKINKDSH-FIRKSSSSSSSPSSSSSSTSSLVNGVVGAGCAKPPQRHPVIIYTHSPK 88
           P PLK+  DSH  I+K   +   P      T            ++PP   PVIIYT SP+
Sbjct: 16  PIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQ-----QEPSQSRPPP-GPVIIYTVSPR 75

Query: 89  IIHTHPRDFMALVQKLTGLSRSDDEAGANSPNAT 122
           IIHTHP +FM LVQ+LTG + +   + + S + +
Sbjct: 76  IIHTHPNNFMTLVQRLTGKTSTSTTSSSYSSSTS 103

[Close]

BLAST of MC06g0317 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-05
Identity = 34/105 (32.38%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 29  PPPLKINKDSH-FIRKSSSSSSSPSSSSSSTSSLVNGVVGAGCAKPPQRHPVIIYTHSPK 88
           P PLK+  DSH  I+K   +   P      T            ++PP   PV IYT +P+
Sbjct: 16  PTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQ-----QEPSQSRPPP-GPVNIYTVTPR 75

Query: 89  IIHTHPRDFMALVQKLTGLSRSDDEAGANSPNATKCGEENKIISS 133
           IIHTHP +FM LVQ+LTG + +   + ++S + ++  + + ++ +
Sbjct: 76  IIHTHPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTMVDT 114

[Close]

BLAST of MC06g0317 vs. TAIR 10
Match: AT3G18690.1 (MAP kinase substrate 1 )

HSP 1 Score: 45.4 bits (106), Expect = 7.5e-05
Identity = 35/105 (33.33%), Postives = 47/105 (44.76%), Query Frame = 0


Query: 29  PPPLKINKDSHFIRKSSSSSSSPSSSSSSTSSLVNGVVGAGCAKPP--QRHPVIIYTHSP 88
           P PL ++KDSH I+K     + P +                   PP   R PV+IY  SP
Sbjct: 29  PSPLSVHKDSHKIKKPPKHPAPPPNRDQ---------------PPPYIPREPVVIYAVSP 88

Query: 89  KIIHTHPRDFMALVQKLTGLSR----SDDEAGANSPNATKCGEEN 128
           K++H    +FM +VQ+LTG+S          G  SP A     EN
Sbjct: 89  KVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLASTEN 118

The following BLAST results are available for this feature:

BLAST of MC06g0317 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS54	2.1e-28	39.62	VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1	[more]
Q9CA36	2.3e-06	35.83	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
F4HWF9	4.7e-04	32.38	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]

BLAST of MC06g0317 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135386.1	2.67e-174	100.00	VQ motif-containing protein 20 [Momordica charantia]	[more]
XP_023007145.1	1.58e-112	77.95	VQ motif-containing protein 20-like [Cucurbita maxima]	[more]
KAG7021613.1	6.40e-112	76.77	VQ motif-containing protein 20, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022933476.1	1.83e-111	76.77	VQ motif-containing protein 20-like [Cucurbita moschata]	[more]
KAG6587652.1	3.69e-111	75.59	VQ motif-containing protein 20, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MC06g0317 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0L6	1.29e-174	100.00	VQ motif-containing protein 20 OS=Momordica charantia OX=3673 GN=LOC111007349 PE...	[more]
A0A6J1L266	7.63e-113	77.95	VQ motif-containing protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111499724 ...	[more]
A0A6J1EZ55	8.86e-112	76.77	VQ motif-containing protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC11144088...	[more]
A0A0A0LKA6	2.04e-95	70.08	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=...	[more]
A0A1S3BCI6	5.36e-91	69.53	VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4...	[more]

BLAST of MC06g0317 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18360.1	1.5e-29	39.62	VQ motif-containing protein	[more]
AT1G68450.1	1.6e-07	35.83	VQ motif-containing protein	[more]
AT1G21326.1	5.2e-06	38.30	VQ motif-containing protein	[more]
AT1G21320.1	3.4e-05	32.38	nucleotide binding;nucleic acid binding	[more]
AT3G18690.1	7.5e-05	33.33	MAP kinase substrate 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 83..107 e-value: 2.6E-11 score: 42.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
IPR039832	VQ motif-containing protein 20	PANTHER	PTHR33143:SF4	VQ MOTIF-CONTAINING PROTEIN 20	coord: 1..243
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 1..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0317.1	MC06g0317.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding