MC06g0307 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g0307
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC06: 2465048 .. 2465395 (-)
RNA-Seq ExpressionMC06g0307
SyntenyMC06g0307
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGGGAAAAAAGGAGAAGGGGGGTACCGGAAAACAGCGACGGAATTGGTGTAAAGAAGACAAAGAACGAGGAGCAGGCGGCGGCGGCGGCGGCGGAGGAGCCGACGGACGAGGAGGTGGAGGAGTTTTTTGTGATACTGCGGCGGATGAAGGAAGCGGTGGAGTATTTCGGAGGGAGGAAGAGGGCATTGACGGAGAGTTTGATCGGAGCGGCGGCGGATCGGGAAGAGAAGGAGGAGGAGGAGGAGGAGAAGGAGCCGGCGGGGATGGAACGCCGTGGGAAGGGGACGGAAGTGGTGGAGGAAAATGGGTTGAGGTTGGATTTGAATATAGCGGTGGCGGTG

mRNA sequence

ATGGGAAGGGAAAAAAGGAGAAGGGGGGTACCGGAAAACAGCGACGGAATTGGTGTAAAGAAGACAAAGAACGAGGAGCAGGCGGCGGCGGCGGCGGCGGAGGAGCCGACGGACGAGGAGGTGGAGGAGTTTTTTGTGATACTGCGGCGGATGAAGGAAGCGGTGGAGTATTTCGGAGGGAGGAAGAGGGCATTGACGGAGAGTTTGATCGGAGCGGCGGCGGATCGGGAAGAGAAGGAGGAGGAGGAGGAGGAGAAGGAGCCGGCGGGGATGGAACGCCGTGGGAAGGGGACGGAAGTGGTGGAGGAAAATGGGTTGAGGTTGGATTTGAATATAGCGGTGGCGGTG

Coding sequence (CDS)

ATGGGAAGGGAAAAAAGGAGAAGGGGGGTACCGGAAAACAGCGACGGAATTGGTGTAAAGAAGACAAAGAACGAGGAGCAGGCGGCGGCGGCGGCGGCGGAGGAGCCGACGGACGAGGAGGTGGAGGAGTTTTTTGTGATACTGCGGCGGATGAAGGAAGCGGTGGAGTATTTCGGAGGGAGGAAGAGGGCATTGACGGAGAGTTTGATCGGAGCGGCGGCGGATCGGGAAGAGAAGGAGGAGGAGGAGGAGGAGAAGGAGCCGGCGGGGATGGAACGCCGTGGGAAGGGGACGGAAGTGGTGGAGGAAAATGGGTTGAGGTTGGATTTGAATATAGCGGTGGCGGTG

Protein sequence

MGREKRRRGVPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESLIGAAADREEKEEEEEEKEPAGMERRGKGTEVVEENGLRLDLNIAVAV
Homology
BLAST of MC06g0307 vs. NCBI nr
Match: KAE8652459.1 (hypothetical protein Csa_013196 [Cucumis sativus])

HSP 1 Score: 112 bits (280), Expect = 3.85e-29
Identity = 75/128 (58.59%), Postives = 93/128 (72.66%), Query Frame = 0

Query: 1   MGREKRRRGVPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYFGG 60
           MG+EKR+R + EN   I  KKTKN++     AAEEPTDEEVEEF++ILRRMK+  EYFG 
Sbjct: 1   MGKEKRKRQM-ENRAEIHEKKTKNDD-TPTPAAEEPTDEEVEEFYMILRRMKQMAEYFGV 60

Query: 61  RKRALTESL---IGAAADREEKEEEEEEKE---------PAGMERRGKGTEVVEENGLRL 116
            +  L +SL   + AAAD++EK+EEEEE++         PA + RRGKG EVVEENGLRL
Sbjct: 61  ERGMLAKSLSAVVAAAADQQEKKEEEEEEKKGLSMAAPSPAEVSRRGKGKEVVEENGLRL 120

BLAST of MC06g0307 vs. NCBI nr
Match: KAG6589551.1 (hypothetical protein SDJN03_14974, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 103 bits (256), Expect = 1.54e-25
Identity = 72/115 (62.61%), Postives = 79/115 (68.70%), Query Frame = 0

Query: 12  ENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYFGGRKRALTESL-- 71
           EN      KKTKN+E   AAA +EPTDEEVEEF+ ILRRMK A EYFG  K  LT+SL  
Sbjct: 11  ENDGKFCEKKTKNDE-TTAAAEKEPTDEEVEEFYSILRRMKRAAEYFGVEKGMLTKSLRD 70

Query: 72  -IGAAADREEKEEE-------EEEKEPAGMERRGKGTEVVEENGLRLDLNIAVAV 116
              AAADREEKEEE       E E + A M++ GKG EVV ENGLRLDLNIAVAV
Sbjct: 71  VAAAAADREEKEEEKKGVKRAEAETDVARMKQGGKGKEVVAENGLRLDLNIAVAV 124

BLAST of MC06g0307 vs. NCBI nr
Match: KAA0058070.1 (hypothetical protein E6C27_scaffold274G003770 [Cucumis melo var. makuwa])

HSP 1 Score: 98.6 bits (244), Expect = 1.04e-23
Identity = 71/126 (56.35%), Postives = 91/126 (72.22%), Query Frame = 0

Query: 1   MGREKRRRGVPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYFGG 60
           MG+EKR+R + E+   I  KKT+N++  A+ AAEEPTDEEVEEF++ILRRMK+  EYFG 
Sbjct: 1   MGKEKRKRQL-ESRVPIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGV 60

Query: 61  RKRALTESL---IGAAADREEKEEEEE-----EKEPAGMERRGKGT-EVVEENGLRL-DL 116
            +  LT+SL   + AAA+++EK+EEE+        PA   +RGK   EVVEENGLRL DL
Sbjct: 61  ERGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDL 120

BLAST of MC06g0307 vs. NCBI nr
Match: TYK28420.1 (hypothetical protein E5676_scaffold629G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 98.6 bits (244), Expect = 1.04e-23
Identity = 71/126 (56.35%), Postives = 91/126 (72.22%), Query Frame = 0

Query: 1   MGREKRRRGVPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYFGG 60
           MG+EKR+R + E+   I  KKT+N++  A+ AAEEPTDEEVEEF++ILRRMK+  EYFG 
Sbjct: 1   MGKEKRKRQL-ESRVRIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGV 60

Query: 61  RKRALTESL---IGAAADREEKEEEEE-----EKEPAGMERRGKGT-EVVEENGLRL-DL 116
            +  LT+SL   + AAA+++EK+EEE+        PA   +RGK   EVVEENGLRL DL
Sbjct: 61  ERGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDL 120

BLAST of MC06g0307 vs. NCBI nr
Match: KAG6584363.1 (hypothetical protein SDJN03_20295, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 53.1 bits (126), Expect = 3.03e-06
Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 0

Query: 1  MGREKRRRGVPENSDGIGVKKTKNEEQAAAAAA------EEPTDEEVEEFFVILRRMKEA 60
          M REKR++  P   +    KKT+ EE+ AAAAA      EEPT EEVEEF+ ILRRM  A
Sbjct: 1  MEREKRKKMSPGEKETKRSKKTRKEEREAAAAAGVETEMEEPTTEEVEEFYAILRRMDVA 60

Query: 61 VEYFGGRK 62
          + Y  G++
Sbjct: 61 LRYLKGKR 68

BLAST of MC06g0307 vs. ExPASy TrEMBL
Match: A0A5D3DYW7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00500 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.03e-24
Identity = 71/126 (56.35%), Postives = 91/126 (72.22%), Query Frame = 0

Query: 1   MGREKRRRGVPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYFGG 60
           MG+EKR+R + E+   I  KKT+N++  A+ AAEEPTDEEVEEF++ILRRMK+  EYFG 
Sbjct: 1   MGKEKRKRQL-ESRVRIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGV 60

Query: 61  RKRALTESL---IGAAADREEKEEEEE-----EKEPAGMERRGKGT-EVVEENGLRL-DL 116
            +  LT+SL   + AAA+++EK+EEE+        PA   +RGK   EVVEENGLRL DL
Sbjct: 61  ERGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDL 120

BLAST of MC06g0307 vs. ExPASy TrEMBL
Match: A0A5A7USD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003770 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.03e-24
Identity = 71/126 (56.35%), Postives = 91/126 (72.22%), Query Frame = 0

Query: 1   MGREKRRRGVPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYFGG 60
           MG+EKR+R + E+   I  KKT+N++  A+ AAEEPTDEEVEEF++ILRRMK+  EYFG 
Sbjct: 1   MGKEKRKRQL-ESRVPIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGV 60

Query: 61  RKRALTESL---IGAAADREEKEEEEE-----EKEPAGMERRGKGT-EVVEENGLRL-DL 116
            +  LT+SL   + AAA+++EK+EEE+        PA   +RGK   EVVEENGLRL DL
Sbjct: 61  ERGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDL 120

BLAST of MC06g0307 vs. ExPASy TrEMBL
Match: A0A2N9GJM2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27521 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.12e-07
Identity = 48/114 (42.11%), Postives = 65/114 (57.02%), Query Frame = 0

Query: 4   EKRRRG-VPENSDGIGVKKTKNEEQAAAAAAEEPTDEEVEEFFVILRRMKEAVEYF--GG 63
           EKR+RG   E  +G  +KK +  E+        P++EEVEEFF ILRRMK AV+YF  GG
Sbjct: 4   EKRKRGGEKEGEEGEEIKKVR--EEVGKGEGVVPSEEEVEEFFAILRRMKVAVKYFERGG 63

Query: 64  RK---RALTESLIGAAADREEKEEEEEEKEPAGMERRGKGTEVVEENGLRLDLN 111
                RA   +  G   D EE+EEEE++++   M+++ K     EE    LDLN
Sbjct: 64  NGEGWRAALGTEEGGVVDEEEEEEEEDKRDVMMMKKKKKKGHTREEESGILDLN 115

BLAST of MC06g0307 vs. ExPASy TrEMBL
Match: A0A3N7FGA1 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T172014 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.79e-06
Identity = 50/126 (39.68%), Postives = 65/126 (51.59%), Query Frame = 0

Query: 2   GREKRRRGVPENSDGIG--VKKTKNEEQAAAAAAEEP-----TDEEVEEFFVILRRMKEA 61
           G+EKRRRG  E+  G    V+  + +E+    A E+      T+EEVEEFF ILRRM+EA
Sbjct: 19  GKEKRRRGDKESEQGRKKKVRGQEGKEEVVTVATEDEVVTVATEEEVEEFFAILRRMQEA 78

Query: 62  VEYFGGRK----RALTESLIGAAADREEKEEEEEEKEPAGMERRGKGTEVVEENGLRLDL 116
            +YFG       RA  E+ +    D     EEE   + +G E      E  EENG+ LDL
Sbjct: 79  AKYFGKGSGEGWRAAVEAKVVEVIDGGGNNEEENMIQSSGAEEVAAVVEEEEENGV-LDL 138

BLAST of MC06g0307 vs. ExPASy TrEMBL
Match: A0A3N7G0A2 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G054350 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.93e-06
Identity = 50/126 (39.68%), Postives = 65/126 (51.59%), Query Frame = 0

Query: 2   GREKRRRGVPENSDGIG--VKKTKNEEQAAAAAAEEP-----TDEEVEEFFVILRRMKEA 61
           G+EKR+RG  E+  G    V+  + +E+    A EE      T+EEVEEFF ILRRM+EA
Sbjct: 19  GKEKRKRGDKESEQGRKKKVRGREGKEEVVTVATEEEVVTVATEEEVEEFFAILRRMQEA 78

Query: 62  VEYFGGRK----RALTESLIGAAADREEKEEEEEEKEPAGMERRGKGTEVVEENGLRLDL 116
            +YFG       RA  E+ +    D     EEE   + +G E      E  EENG+ LDL
Sbjct: 79  AKYFGKGSGEGWRAAVEAKVVEVIDGGGNNEEEIMIQSSGAEEVAAVVEEEEENGV-LDL 138

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAE8652459.13.85e-2958.59hypothetical protein Csa_013196 [Cucumis sativus][more]
KAG6589551.11.54e-2562.61hypothetical protein SDJN03_14974, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0058070.11.04e-2356.35hypothetical protein E6C27_scaffold274G003770 [Cucumis melo var. makuwa][more]
TYK28420.11.04e-2356.35hypothetical protein E5676_scaffold629G00500 [Cucumis melo var. makuwa][more]
KAG6584363.13.03e-0650.00hypothetical protein SDJN03_20295, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A5D3DYW75.03e-2456.35Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7USD15.03e-2456.35Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A2N9GJM21.12e-0742.11Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27521 PE=4 SV=1[more]
A0A3N7FGA11.79e-0639.68Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T172014 PE=4 SV=... [more]
A0A3N7G0A24.93e-0639.68Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G054350 PE=4 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..100
NoneNo IPR availablePANTHERPTHR35735:SF5TRANSMEMBRANE PROTEIN DDB_G0274347-LIKEcoord: 1..112
IPR034577Protein NIM1-INTERACTING 2PANTHERPTHR35735PROTEIN NIM1-INTERACTING 2coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g0307.1MC06g0307.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010112 regulation of systemic acquired resistance