MC06g0287 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0287
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	two-component response regulator ORR24-like
Location	MC06: 2332933 .. 2333316 (-)
RNA-Seq Expression	MC06g0287
Synteny	MC06g0287

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGTGACGACGACGGAGATGAATATGAAGGCAGCCGGAAAGTCTATTGCCGAATGGGGCTTTTACTTCCTCGAGAAGCCGATTTCCACGAAGAACATCGAACTTGTTTGGCAACTCGTTTACAGGAAAATCAGAAACCCTAGGCCGAAAAATGGGGGGAGAAAATGCCAATTGAGGGAAGACAATCTTAGATTGGTGGAATACGTGGCTGAATCATCAACATTGCGAGAGTAGATCAGTGGAATGCGATTGAAAAAGAAGGAAAGAAAAACGATGGTGATAAATTTTCGATCTGCAATTGTATTTGAGTGCACGAACAAGAGGTCGCGGATTGTTTGGAGCTCGAAATTGCATCGGATGTTCACAGAAGCATTGAGCAAACTC

mRNA sequence

GCAGTGACGACGACGGAGATGAATATGAAGGCAGCCGGAAAGTCTATTGCCGAATGGGGCTTTTACTTCCTCGAGAAGCCGATTTCCACGAAGAACATCGAACTTGTTTGGCAACTCGTTTACAGGAAAATCAGAAACCCTAGGCCGAAAAATGGGGGGAGAAAATGCCAATTGAGGGAAGACAATCTTAGATTGGTGGAATACGTGGCTATCATCAACATTGCGAGAGTAGATCAGTGGAATGCGATTGAAAAAGAAGGAAAGAAAAACGATGGTGATAAATTTTCGTCTGCAATTGTATTTGAGTGCACGAACAAGAGGTCGCGGATTGTTTGGAGCTCGAAATTGCATCGGATGTTCACAGAAGCATTGAGCAAACTC

Coding sequence (CDS)

GCAGTGACGACGACGGAGATGAATATGAAGGCAGCCGGAAAGTCTATTGCCGAATGGGGCTTTTACTTCCTCGAGAAGCCGATTTCCACGAAGAACATCGAACTTGTTTGGCAACTCGTTTACAGGAAAATCAGAAACCCTAGGCCGAAAAATGGGGGGAGAAAATGCCAATTGAGGGAAGACAATCTTAGATTGGTGGAATACGTGGCTATCATCAACATTGCGAGAGTAGATCAGTGGAATGCGATTGAAAAAGAAGGAAAGAAAAACGATGGTGATAAATTTTCGTCTGCAATTGTATTTGAGTGCACGAACAAGAGGTCGCGGATTGTTTGGAGCTCGAAATTGCATCGGATGTTCACAGAAGCATTGAGCAAACTC

Protein sequence

AVTTTEMNMKAAGKSIAEWGFYFLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNLRLVEYVAIINIARVDQWNAIEKEGKKNDGDKFSSAIVFECTNKRSRIVWSSKLHRMFTEALSKL

Homology

[Close]

BLAST of MC06g0287 vs. ExPASy Swiss-Prot
Match: A2XE31 (Two-component response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN=RR21 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-04
Identity = 32/118 (27.12%), Postives = 53/118 (44.92%), Query Frame = 0


Query: 14  KSIAEWGFYFLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNLRLV----EYV 73
           K I      +L KP+  + ++ +WQ V RK  N   ++         D  R      EY 
Sbjct: 105 KGIKHGACDYLIKPVRMEELKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYA 164

Query: 74  AIINIARVDQWNAIEKEGKKNDGDKFSSAIVFECTNKRSRIVWSSKLHRMFTEALSKL 128
           +  N      W + +K+  K+D D    +     T+K+ R+VWS +LH+ F  A++ L
Sbjct: 165 SSANDGAEGSWKSQKKKRDKDDDDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNHL 222

[Close]

BLAST of MC06g0287 vs. ExPASy Swiss-Prot
Match: Q8H7S7 (Two-component response regulator ORR21 OS=Oryza sativa subsp. japonica OX=39947 GN=RR21 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-04
Identity = 32/118 (27.12%), Postives = 53/118 (44.92%), Query Frame = 0


Query: 14  KSIAEWGFYFLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNLRLV----EYV 73
           K I      +L KP+  + ++ +WQ V RK  N   ++         D  R      EY 
Sbjct: 105 KGIKHGACDYLIKPVRMEELKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYA 164

Query: 74  AIINIARVDQWNAIEKEGKKNDGDKFSSAIVFECTNKRSRIVWSSKLHRMFTEALSKL 128
           +  N      W + +K+  K+D D    +     T+K+ R+VWS +LH+ F  A++ L
Sbjct: 165 SSANDGAEGSWKSQKKKRDKDDDDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNHL 222

[Close]

BLAST of MC06g0287 vs. ExPASy Swiss-Prot
Match: Q67W50 (Two-component response regulator ORR25 OS=Oryza sativa subsp. japonica OX=39947 GN=RR25 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-04
Identity = 33/115 (28.70%), Postives = 54/115 (46.96%), Query Frame = 0


Query: 14  KSIAEWGFYFLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNLRLVEYVAIIN 73
           K +      +L KP+S K+I+ +WQ V+RK          RK  +R  N    +   ++ 
Sbjct: 105 KGVTHGACDYLVKPVSLKDIQNIWQHVWRK----------RKLDIRNHNGGYNDGGELVG 164

Query: 74  IARVDQWNAIEKEGKKNDGDKF-SSAIVFECTNKRSRIVWSSKLHRMFTEALSKL 128
             R  +         +NDGD +  +    + T KR R+VW+ +LHR F  A+ +L
Sbjct: 165 ATRTKRKYT---RKMRNDGDNYGENKENMDSTLKRQRVVWTPELHRDFVIAVHEL 206

[Close]

BLAST of MC06g0287 vs. NCBI nr
Match: XP_022150571.1 (two-component response regulator ORR24-like [Momordica charantia])

HSP 1 Score: 143 bits (361), Expect = 5.04e-38
Identity = 82/149 (55.03%), Postives = 96/149 (64.43%), Query Frame = 0


Query: 4   TTEMNMKAAGKSIAEWGFYFLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNL 63
           +TEMNMKAAGKSIAE GF+FLEKPIS ++IELVWQLVYRKIRNPR  N G      + + 
Sbjct: 30  STEMNMKAAGKSIAESGFHFLEKPISMEDIELVWQLVYRKIRNPRANNLGENANQGKKSE 89

Query: 64  RLVEYVAIINIARVDQWNAIEKEGKKNDGDKFS--------SAIVF-------------- 123
                  ++N+AR  +WNAIE+EGK+N G+ F         S  VF              
Sbjct: 90  IGGMCGRVVNVARGVEWNAIEEEGKENYGENFGEREARLKVSGTVFDYLETTKMNAEEKK 149

Query: 124 ---ECTNKRSRIVWSSKLHRMFTEALSKL 127
              ECTNKRSRIVW+SKLHR FTEALSKL
Sbjct: 150 NRNECTNKRSRIVWNSKLHRKFTEALSKL 178

[Close]

BLAST of MC06g0287 vs. NCBI nr
Match: XP_008447014.1 (PREDICTED: two-component response regulator ORR24-like [Cucumis melo])

HSP 1 Score: 122 bits (306), Expect = 3.96e-30
Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 6   EMNMKAAGKSIAEWGFYFLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNLRL 65
           EM+MK AG++IAEWG YFLEKPIS ++IELVWQ+VYRK+RNPR K+ G   +L + +   
Sbjct: 4   EMDMKTAGRAIAEWGCYFLEKPISMEDIELVWQIVYRKVRNPRAKSLGENTKLGKRSEID 63

Query: 66  VEYVAIINIARVDQWNAIEKEGKKNDG--------DKFSSAIVFE-------CTNKRSRI 125
                I+N+ R  +W  +E+E K  +G        +K +  +  E        TNK+SRI
Sbjct: 64  GMLGRIVNVTREVEWKPLEEEEKGGNGGKCRDQGEEKLNPLVKVEEKTNRNERTNKKSRI 123

Query: 126 VWSSKLHRMFTEALSKL 127
           VW+SKLHR FTEALSKL
Sbjct: 124 VWNSKLHRKFTEALSKL 140

[Close]

BLAST of MC06g0287 vs. NCBI nr
Match: KAA0034592.1 (two-component response regulator ORR24-like [Cucumis melo var. makuwa] >TYK09143.1 two-component response regulator ORR24-like [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (306), Expect = 1.03e-29
Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 6   EMNMKAAGKSIAEWGFYFLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNLRL 65
           EM+MK AG++IAEWG YFLEKPIS ++IELVWQ+VYRK+RNPR K+ G   +L + +   
Sbjct: 92  EMDMKTAGRAIAEWGCYFLEKPISMEDIELVWQIVYRKVRNPRAKSLGENTKLGKRSEID 151

Query: 66  VEYVAIINIARVDQWNAIEKEGKKNDG--------DKFSSAIVFE-------CTNKRSRI 125
                I+N+ R  +W  +E+E K  +G        +K +  +  E        TNK+SRI
Sbjct: 152 GMLGRIVNVTREVEWKPLEEEEKGGNGGKCRDQGEEKLNPLVKVEEKTNRNERTNKKSRI 211

Query: 126 VWSSKLHRMFTEALSKL 127
           VW+SKLHR FTEALSKL
Sbjct: 212 VWNSKLHRKFTEALSKL 228

[Close]

BLAST of MC06g0287 vs. NCBI nr
Match: XP_022990826.1 (two-component response regulator ARR14-like [Cucurbita maxima])

HSP 1 Score: 122 bits (305), Expect = 1.16e-29
Identity = 68/145 (46.90%), Postives = 91/145 (62.76%), Query Frame = 0


Query: 6   EMNMKAAGKSIAEWGFYFLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNLRL 65
           E +MK +G++IAEWG++FLEKPIS ++IELVWQ+VYRKIRNPR +N G      + +   
Sbjct: 91  ERDMKTSGRAIAEWGYHFLEKPISMEDIELVWQIVYRKIRNPRARNLGENTNQAKKSHNG 150

Query: 66  VEYVAIINIARVDQWNAIEKEGKKNDGDKFS--------SAIVF---------------E 125
             +  ++N+A   +WN IE+E ++ + +K          SA VF               E
Sbjct: 151 GMFGRVLNVAGGVEWNPIEEEEEEEEKEKCGNREARLKPSATVFDYLETMNVEEKTNRNE 210

Query: 126 CTNKRSRIVWSSKLHRMFTEALSKL 127
            T+KRSRIVWSSKLHR FTEALSKL
Sbjct: 211 RTHKRSRIVWSSKLHRKFTEALSKL 235

[Close]

BLAST of MC06g0287 vs. NCBI nr
Match: KGN52115.1 (hypothetical protein Csa_009400 [Cucumis sativus])

HSP 1 Score: 120 bits (300), Expect = 3.07e-29
Identity = 72/141 (51.06%), Postives = 91/141 (64.54%), Query Frame = 0


Query: 6   EMNMKAAGKSIAEWGFYFLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNLRL 65
           EM+MK AG++IAEWG YFLEKPIS ++IELVWQ+VYRKIRNPR KN G   +L +     
Sbjct: 4   EMDMKTAGRAIAEWGCYFLEKPISMEDIELVWQIVYRKIRNPRAKNLGENAKLGKKFEID 63

Query: 66  VEYVAIINIARVDQWNAIEKEGK-----KNDG-------DKFSSAI-VFECTN------K 125
                I+N+ R  +W ++E+E K     KN G       +K +  + V E TN      K
Sbjct: 64  GVLERIVNVRREVEWKSLEEEEKEKEKGKNGGKCRDQGEEKLNPLLKVEEKTNRNERTIK 123

Query: 126 RSRIVWSSKLHRMFTEALSKL 127
           +SRIVW+SKLHR FTEALSKL
Sbjct: 124 KSRIVWNSKLHRKFTEALSKL 144

[Close]

BLAST of MC06g0287 vs. ExPASy TrEMBL
Match: A0A6J1DBX2 (two-component response regulator ORR24-like OS=Momordica charantia OX=3673 GN=LOC111018680 PE=4 SV=1)

HSP 1 Score: 143 bits (361), Expect = 2.44e-38
Identity = 82/149 (55.03%), Postives = 96/149 (64.43%), Query Frame = 0


Query: 4   TTEMNMKAAGKSIAEWGFYFLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNL 63
           +TEMNMKAAGKSIAE GF+FLEKPIS ++IELVWQLVYRKIRNPR  N G      + + 
Sbjct: 30  STEMNMKAAGKSIAESGFHFLEKPISMEDIELVWQLVYRKIRNPRANNLGENANQGKKSE 89

Query: 64  RLVEYVAIINIARVDQWNAIEKEGKKNDGDKFS--------SAIVF-------------- 123
                  ++N+AR  +WNAIE+EGK+N G+ F         S  VF              
Sbjct: 90  IGGMCGRVVNVARGVEWNAIEEEGKENYGENFGEREARLKVSGTVFDYLETTKMNAEEKK 149

Query: 124 ---ECTNKRSRIVWSSKLHRMFTEALSKL 127
              ECTNKRSRIVW+SKLHR FTEALSKL
Sbjct: 150 NRNECTNKRSRIVWNSKLHRKFTEALSKL 178

[Close]

BLAST of MC06g0287 vs. ExPASy TrEMBL
Match: A0A1S3BGE1 (two-component response regulator ORR24-like OS=Cucumis melo OX=3656 GN=LOC103489562 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 1.92e-30
Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 6   EMNMKAAGKSIAEWGFYFLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNLRL 65
           EM+MK AG++IAEWG YFLEKPIS ++IELVWQ+VYRK+RNPR K+ G   +L + +   
Sbjct: 4   EMDMKTAGRAIAEWGCYFLEKPISMEDIELVWQIVYRKVRNPRAKSLGENTKLGKRSEID 63

Query: 66  VEYVAIINIARVDQWNAIEKEGKKNDG--------DKFSSAIVFE-------CTNKRSRI 125
                I+N+ R  +W  +E+E K  +G        +K +  +  E        TNK+SRI
Sbjct: 64  GMLGRIVNVTREVEWKPLEEEEKGGNGGKCRDQGEEKLNPLVKVEEKTNRNERTNKKSRI 123

Query: 126 VWSSKLHRMFTEALSKL 127
           VW+SKLHR FTEALSKL
Sbjct: 124 VWNSKLHRKFTEALSKL 140

[Close]

BLAST of MC06g0287 vs. ExPASy TrEMBL
Match: A0A5D3CBB1 (Two-component response regulator ORR24-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001340 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 4.97e-30
Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 6   EMNMKAAGKSIAEWGFYFLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNLRL 65
           EM+MK AG++IAEWG YFLEKPIS ++IELVWQ+VYRK+RNPR K+ G   +L + +   
Sbjct: 92  EMDMKTAGRAIAEWGCYFLEKPISMEDIELVWQIVYRKVRNPRAKSLGENTKLGKRSEID 151

Query: 66  VEYVAIINIARVDQWNAIEKEGKKNDG--------DKFSSAIVFE-------CTNKRSRI 125
                I+N+ R  +W  +E+E K  +G        +K +  +  E        TNK+SRI
Sbjct: 152 GMLGRIVNVTREVEWKPLEEEEKGGNGGKCRDQGEEKLNPLVKVEEKTNRNERTNKKSRI 211

Query: 126 VWSSKLHRMFTEALSKL 127
           VW+SKLHR FTEALSKL
Sbjct: 212 VWNSKLHRKFTEALSKL 228

[Close]

BLAST of MC06g0287 vs. ExPASy TrEMBL
Match: A0A6J1JP16 (two-component response regulator ARR14-like OS=Cucurbita maxima OX=3661 GN=LOC111487601 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 5.61e-30
Identity = 68/145 (46.90%), Postives = 91/145 (62.76%), Query Frame = 0


Query: 6   EMNMKAAGKSIAEWGFYFLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNLRL 65
           E +MK +G++IAEWG++FLEKPIS ++IELVWQ+VYRKIRNPR +N G      + +   
Sbjct: 91  ERDMKTSGRAIAEWGYHFLEKPISMEDIELVWQIVYRKIRNPRARNLGENTNQAKKSHNG 150

Query: 66  VEYVAIINIARVDQWNAIEKEGKKNDGDKFS--------SAIVF---------------E 125
             +  ++N+A   +WN IE+E ++ + +K          SA VF               E
Sbjct: 151 GMFGRVLNVAGGVEWNPIEEEEEEEEKEKCGNREARLKPSATVFDYLETMNVEEKTNRNE 210

Query: 126 CTNKRSRIVWSSKLHRMFTEALSKL 127
            T+KRSRIVWSSKLHR FTEALSKL
Sbjct: 211 RTHKRSRIVWSSKLHRKFTEALSKL 235

[Close]

BLAST of MC06g0287 vs. ExPASy TrEMBL
Match: A0A0A0KR71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G610490 PE=4 SV=1)

HSP 1 Score: 120 bits (300), Expect = 1.49e-29
Identity = 72/141 (51.06%), Postives = 91/141 (64.54%), Query Frame = 0


Query: 6   EMNMKAAGKSIAEWGFYFLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNLRL 65
           EM+MK AG++IAEWG YFLEKPIS ++IELVWQ+VYRKIRNPR KN G   +L +     
Sbjct: 4   EMDMKTAGRAIAEWGCYFLEKPISMEDIELVWQIVYRKIRNPRAKNLGENAKLGKKFEID 63

Query: 66  VEYVAIINIARVDQWNAIEKEGK-----KNDG-------DKFSSAI-VFECTN------K 125
                I+N+ R  +W ++E+E K     KN G       +K +  + V E TN      K
Sbjct: 64  GVLERIVNVRREVEWKSLEEEEKEKEKGKNGGKCRDQGEEKLNPLLKVEEKTNRNERTIK 123

Query: 126 RSRIVWSSKLHRMFTEALSKL 127
           +SRIVW+SKLHR FTEALSKL
Sbjct: 124 KSRIVWNSKLHRKFTEALSKL 144

[Close]

BLAST of MC06g0287 vs. TAIR 10
Match: AT2G01760.1 (response regulator 14 )

HSP 1 Score: 43.5 bits (101), Expect = 1.5e-04
Identity = 32/113 (28.32%), Postives = 55/113 (48.67%), Query Frame = 0


Query: 23  FLEKPISTKNIELVWQLVYRKIRNPRPKNGGRKCQLREDNLRLVEY-VAIINIARVDQWN 82
           +L KPI  + ++ +WQ V R  R    K   R  Q  EDN         +++++   + +
Sbjct: 110 YLIKPIRPEELKNIWQHVVR--RKCVMKKELRSSQALEDNKNSGSLETVVVSVSECSEES 169

Query: 83  AIEKEGKKN------DGDKFSSAIVFECTN-KRSRIVWSSKLHRMFTEALSKL 128
            ++   KK       D D     ++ +  N K+SR+VWS +LH+ F  A++KL
Sbjct: 170 LMKCRNKKKKKKRSVDRDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKL 220

The following BLAST results are available for this feature:

BLAST of MC06g0287 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2XE31	1.1e-04	27.12	Two-component response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
Q8H7S7	1.1e-04	27.12	Two-component response regulator ORR21 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q67W50	1.1e-04	28.70	Two-component response regulator ORR25 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of MC06g0287 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150571.1	5.04e-38	55.03	two-component response regulator ORR24-like [Momordica charantia]	[more]
XP_008447014.1	3.96e-30	48.91	PREDICTED: two-component response regulator ORR24-like [Cucumis melo]	[more]
KAA0034592.1	1.03e-29	48.91	two-component response regulator ORR24-like [Cucumis melo var. makuwa] >TYK09143...	[more]
XP_022990826.1	1.16e-29	46.90	two-component response regulator ARR14-like [Cucurbita maxima]	[more]
KGN52115.1	3.07e-29	51.06	hypothetical protein Csa_009400 [Cucumis sativus]	[more]

BLAST of MC06g0287 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DBX2	2.44e-38	55.03	two-component response regulator ORR24-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A1S3BGE1	1.92e-30	48.91	two-component response regulator ORR24-like OS=Cucumis melo OX=3656 GN=LOC103489...	[more]
A0A5D3CBB1	4.97e-30	48.91	Two-component response regulator ORR24-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1JP16	5.61e-30	46.90	two-component response regulator ARR14-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A0A0KR71	1.49e-29	51.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G610490 PE=4 SV=1	[more]

BLAST of MC06g0287 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01760.1	1.5e-04	28.32	response regulator 14	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0287.1	MC06g0287.1	mRNA