MC06g0206 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0206
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	HNH domain-containing protein
Location	MC06: 1709337 .. 1710892 (-)
RNA-Seq Expression	MC06g0206
Synteny	MC06g0206

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTACTTCCAGATCGCCGTCGCCAACGCGTTCGCGCGGCGGACATAGACACAGTGGCTCCGGCAATGGGGACGAACGGCCGAGATTTTTCGACACCAAAGCGAAAGCCATTTGTTGGGCCAAGGCCGACATTGTCCCCGGTCGGCACCCCGACCGATGGCGTAAGGACGCCGCGGGTAACGTCGTCTGCAAGCGCTTCTGCAACTGCCAGGGCTGCCTCTGCTTCGAGTACGATCACATTGTCCCCTTCTCCAAAGGTAACTTATTCGAGATATTTCGCTGCTGCTGTTGCGTTTTTGTTAGGGATGTCTGTAAATTTATAGTTTAGGTTTTGCTATGTTGAATTTGAGATCTGATCAGCAATTGTGGGCAGGCGGCGAGTCAACGGCAGAGAATTGCCAGATTCTTCAAACGAGGGTTAACAGATTCAAATCGGATAAAGATGATGTCGATGCATCTCAGTTGAAAGGCTACTCCTGTGATGTCAGGTTTACCGGTATAACTTCATTCTGCTTCTGCCCTAATTCTTTGTATATTACAATTCATGCTCTTCTGTTTACTCGTAACATCTCGAGTGCCTGTTTAGTTCGCTTGTCTGTCCTTTTGTTCTTCCAATTTTTCCCAGTAGAATATAGCATCGATTTCATTTTCTCCCATCTGCTCCATGTATAGAACAATATAATTTCATCAGCTTTTCCGCTATCTTATGGTCTTTAGCTCAATTTTGTACAAATCCAGCTCTTCACGAGCTAATTGATTGGATATTCTATTTTGTTCATCTTTTGAGTGTACTTAGTGACATTTTGGGGGGGGGGGGNGGGGGGGGGGGAAGTGGTGCGGAACATCATTATATTTTCAGGAAAGTGCTAGAAAGTGAAGTTTCAATTGTTTTTGAAACAGTGTTTGCTGGTCCCTGTTCCATATTAGCTGTCATTGCTGGTAGTAGGTAATGGTTCAAACAAAAGAGTGCTTGTATTTTGGTCAATTGAAACACCAAGAAAGAACCTCCATGGGCCAAAAGTAGAAACTATAAACTCATAACATATTTTCAAGGTTATGAATTCAAATCTACTCATCTAGAATATCAAATCTCTTATGTATGGTGAATTTGTTGTTGTGTGCGAAAGCCAAACATTTGGACATCTCAGTTGTGGATCGTGATCAATACCAAAACCTGTAAAAATGCATTTTGGGTAGAATTCTGTGAGGAAGACATAGATTATCTTATATACAATTTGGTGAATTGGGTTTCAGTGAATCATTTTAAAGATTTTAGGATTCATTGGGTTAGAGGTCAAAGCCAGGACTAGAACCATTATCTATGAACTGTGATTCTTCATCTTCTCCATTGTCGAGTTTTATCATCTCTTCTCTCCCATCTTTACATGATGTGTCTGGACTGCATATTTTGTTGCAGACAAGGAACTTGACATAATTGAAATGGCTGTTTATGGAGACGTAATCCGGCCAGGGAACCAGTGTCGTTGTAGAACAGTTTCAGAAATGCTGGGACAGTATAAATCAAAGGACCGCCTGGCCCCCTGCAAGCTGCCATCT

mRNA sequence

ACTACTTCCAGATCGCCGTCGCCAACGCGTTCGCGCGGCGGACATAGACACAGTGGCTCCGGCAATGGGGACGAACGGCCGAGATTTTTCGACACCAAAGCGAAAGCCATTTGTTGGGCCAAGGCCGACATTGTCCCCGGTCGGCACCCCGACCGATGGCGTAAGGACGCCGCGGGTAACGTCGTCTGCAAGCGCTTCTGCAACTGCCAGGGCTGCCTCTGCTTCGAGTACGATCACATTGTCCCCTTCTCCAAAGGCGGCGAGTCAACGGCAGAGAATTGCCAGATTCTTCAAACGAGGGTTAACAGATTCAAATCGGATAAAGATGATGTCGATGCATCTCAGTTGAAAGGCTACTCCTGTGATGTCAGGTTTACCGACAAGGAACTTGACATAATTGAAATGGCTGTTTATGGAGACGTAATCCGGCCAGGGAACCAGTGTCGTTGTAGAACAGTTTCAGAAATGCTGGGACAGTATAAATCAAAGGACCGCCTGGCCCCCTGCAAGCTGCCATCT

Coding sequence (CDS)

ACTACTTCCAGATCGCCGTCGCCAACGCGTTCGCGCGGCGGACATAGACACAGTGGCTCCGGCAATGGGGACGAACGGCCGAGATTTTTCGACACCAAAGCGAAAGCCATTTGTTGGGCCAAGGCCGACATTGTCCCCGGTCGGCACCCCGACCGATGGCGTAAGGACGCCGCGGGTAACGTCGTCTGCAAGCGCTTCTGCAACTGCCAGGGCTGCCTCTGCTTCGAGTACGATCACATTGTCCCCTTCTCCAAAGGCGGCGAGTCAACGGCAGAGAATTGCCAGATTCTTCAAACGAGGGTTAACAGATTCAAATCGGATAAAGATGATGTCGATGCATCTCAGTTGAAAGGCTACTCCTGTGATGTCAGGTTTACCGACAAGGAACTTGACATAATTGAAATGGCTGTTTATGGAGACGTAATCCGGCCAGGGAACCAGTGTCGTTGTAGAACAGTTTCAGAAATGCTGGGACAGTATAAATCAAAGGACCGCCTGGCCCCCTGCAAGCTGCCATCT

Protein sequence

TTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPS

Homology

[Close]

BLAST of MC06g0206 vs. NCBI nr
Match: XP_022135260.1 (uncharacterized protein LOC111007267 [Momordica charantia])

HSP 1 Score: 367 bits (941), Expect = 3.89e-128
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   TTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGN 60
           TTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGN
Sbjct: 3   TTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGN 62

Query: 61  VVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYS 120
           VVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYS
Sbjct: 63  VVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYS 122

Query: 121 CDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPS 173
           CDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPS
Sbjct: 123 CDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPS 175

[Close]

BLAST of MC06g0206 vs. NCBI nr
Match: XP_023531696.1 (uncharacterized protein LOC111793864 [Cucurbita pepo subsp. pepo] >KAG6587563.1 hypothetical protein SDJN03_16128, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 345 bits (884), Expect = 2.83e-119
Identity = 162/171 (94.74%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 2   TSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNV 61
           TS SPSPTRSRGG R SGSGNG+ERPRFFDTKAKAICWAKAD VPGRHP+RWRKDAAGNV
Sbjct: 15  TSSSPSPTRSRGGPRQSGSGNGNERPRFFDTKAKAICWAKADTVPGRHPERWRKDAAGNV 74

Query: 62  VCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYSC 121
           VCKRFCNCQGCLCFEYDHIVPFSKGGESTA+NCQILQTRVNRFKSDKDDVD SQLKGYSC
Sbjct: 75  VCKRFCNCQGCLCFEYDHIVPFSKGGESTADNCQILQTRVNRFKSDKDDVDTSQLKGYSC 134

Query: 122 DVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 172
           DV+FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP
Sbjct: 135 DVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 185

[Close]

BLAST of MC06g0206 vs. NCBI nr
Match: XP_022933741.1 (uncharacterized protein LOC111441065 [Cucurbita moschata] >XP_022972986.1 uncharacterized protein LOC111471509 [Cucurbita maxima])

HSP 1 Score: 345 bits (884), Expect = 2.83e-119
Identity = 162/171 (94.74%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 2   TSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNV 61
           TS SPSPTRSRGG R SGSGNG+ERPRFFDTKAKAICWAKAD VPGRHP+RWRKDAAGNV
Sbjct: 15  TSSSPSPTRSRGGPRQSGSGNGNERPRFFDTKAKAICWAKADTVPGRHPERWRKDAAGNV 74

Query: 62  VCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYSC 121
           VCKRFCNCQGCLCFEYDHIVPFSKGGESTA+NCQILQTRVNRFKSDKDDVD SQLKGYSC
Sbjct: 75  VCKRFCNCQGCLCFEYDHIVPFSKGGESTADNCQILQTRVNRFKSDKDDVDTSQLKGYSC 134

Query: 122 DVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 172
           DV+FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP
Sbjct: 135 DVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 185

[Close]

BLAST of MC06g0206 vs. NCBI nr
Match: XP_038878253.1 (uncharacterized protein LOC120070538 [Benincasa hispida])

HSP 1 Score: 342 bits (877), Expect = 2.24e-118
Identity = 156/171 (91.23%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 2   TSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNV 61
           TS SPSPTRSRGGHRHSGSG+GDERPRFFDTKAKAICW KAD+VPGRHP+RWRKDAAGNV
Sbjct: 4   TSSSPSPTRSRGGHRHSGSGSGDERPRFFDTKAKAICWDKADVVPGRHPERWRKDAAGNV 63

Query: 62  VCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYSC 121
           VCKRFCNCQGCLCFEYDHIVP+SKGGESTA+NCQILQTRVNRFKS+++DVD S+LKGYSC
Sbjct: 64  VCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNRNDVDTSELKGYSC 123

Query: 122 DVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 172
           D++FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYK+KDRLAPCKLP
Sbjct: 124 DIKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKAKDRLAPCKLP 174

[Close]

BLAST of MC06g0206 vs. NCBI nr
Match: XP_008453224.1 (PREDICTED: uncharacterized protein LOC103494011 isoform X2 [Cucumis melo] >KAA0057965.1 HNH endonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 338 bits (867), Expect = 7.50e-117
Identity = 157/171 (91.81%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 2   TSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNV 61
           TS SPSPTRSRGG R SGSG+GDERPRFFD KAKA CWAKAD+VPGRHP+RWRKDAAGNV
Sbjct: 4   TSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNV 63

Query: 62  VCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYSC 121
           VCKRFCNCQGCLCFEYDHIVP+SKGGESTA+NCQILQTRVNRFKS+KDDVD S+LKGYSC
Sbjct: 64  VCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKGYSC 123

Query: 122 DVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 172
           DV+FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP
Sbjct: 124 DVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 174

[Close]

BLAST of MC06g0206 vs. ExPASy TrEMBL
Match: A0A6J1C0N7 (uncharacterized protein LOC111007267 OS=Momordica charantia OX=3673 GN=LOC111007267 PE=4 SV=1)

HSP 1 Score: 367 bits (941), Expect = 1.88e-128
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   TTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGN 60
           TTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGN
Sbjct: 3   TTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGN 62

Query: 61  VVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYS 120
           VVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYS
Sbjct: 63  VVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYS 122

Query: 121 CDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPS 173
           CDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPS
Sbjct: 123 CDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPS 175

[Close]

BLAST of MC06g0206 vs. ExPASy TrEMBL
Match: A0A6J1I7G1 (uncharacterized protein LOC111471509 OS=Cucurbita maxima OX=3661 GN=LOC111471509 PE=4 SV=1)

HSP 1 Score: 345 bits (884), Expect = 1.37e-119
Identity = 162/171 (94.74%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 2   TSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNV 61
           TS SPSPTRSRGG R SGSGNG+ERPRFFDTKAKAICWAKAD VPGRHP+RWRKDAAGNV
Sbjct: 15  TSSSPSPTRSRGGPRQSGSGNGNERPRFFDTKAKAICWAKADTVPGRHPERWRKDAAGNV 74

Query: 62  VCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYSC 121
           VCKRFCNCQGCLCFEYDHIVPFSKGGESTA+NCQILQTRVNRFKSDKDDVD SQLKGYSC
Sbjct: 75  VCKRFCNCQGCLCFEYDHIVPFSKGGESTADNCQILQTRVNRFKSDKDDVDTSQLKGYSC 134

Query: 122 DVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 172
           DV+FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP
Sbjct: 135 DVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 185

[Close]

BLAST of MC06g0206 vs. ExPASy TrEMBL
Match: A0A6J1EZW3 (uncharacterized protein LOC111441065 OS=Cucurbita moschata OX=3662 GN=LOC111441065 PE=4 SV=1)

HSP 1 Score: 345 bits (884), Expect = 1.37e-119
Identity = 162/171 (94.74%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 2   TSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNV 61
           TS SPSPTRSRGG R SGSGNG+ERPRFFDTKAKAICWAKAD VPGRHP+RWRKDAAGNV
Sbjct: 15  TSSSPSPTRSRGGPRQSGSGNGNERPRFFDTKAKAICWAKADTVPGRHPERWRKDAAGNV 74

Query: 62  VCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYSC 121
           VCKRFCNCQGCLCFEYDHIVPFSKGGESTA+NCQILQTRVNRFKSDKDDVD SQLKGYSC
Sbjct: 75  VCKRFCNCQGCLCFEYDHIVPFSKGGESTADNCQILQTRVNRFKSDKDDVDTSQLKGYSC 134

Query: 122 DVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 172
           DV+FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP
Sbjct: 135 DVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 185

[Close]

BLAST of MC06g0206 vs. ExPASy TrEMBL
Match: A0A5A7UWI1 (HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002690 PE=4 SV=1)

HSP 1 Score: 338 bits (867), Expect = 3.63e-117
Identity = 157/171 (91.81%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 2   TSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNV 61
           TS SPSPTRSRGG R SGSG+GDERPRFFD KAKA CWAKAD+VPGRHP+RWRKDAAGNV
Sbjct: 4   TSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNV 63

Query: 62  VCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYSC 121
           VCKRFCNCQGCLCFEYDHIVP+SKGGESTA+NCQILQTRVNRFKS+KDDVD S+LKGYSC
Sbjct: 64  VCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKGYSC 123

Query: 122 DVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 172
           DV+FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP
Sbjct: 124 DVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 174

[Close]

BLAST of MC06g0206 vs. ExPASy TrEMBL
Match: A0A1S3BVP6 (uncharacterized protein LOC103494011 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494011 PE=4 SV=1)

HSP 1 Score: 338 bits (867), Expect = 3.63e-117
Identity = 157/171 (91.81%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 2   TSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNV 61
           TS SPSPTRSRGG R SGSG+GDERPRFFD KAKA CWAKAD+VPGRHP+RWRKDAAGNV
Sbjct: 4   TSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNV 63

Query: 62  VCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYSC 121
           VCKRFCNCQGCLCFEYDHIVP+SKGGESTA+NCQILQTRVNRFKS+KDDVD S+LKGYSC
Sbjct: 64  VCKRFCNCQGCLCFEYDHIVPYSKGGESTADNCQILQTRVNRFKSNKDDVDTSELKGYSC 123

Query: 122 DVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 172
           DV+FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP
Sbjct: 124 DVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP 174

[Close]

BLAST of MC06g0206 vs. TAIR 10
Match: AT1G18680.1 (HNH endonuclease domain-containing protein )

HSP 1 Score: 267.7 bits (683), Expect = 6.5e-72
Identity = 122/173 (70.52%), Postives = 142/173 (82.08%), Query Frame = 0


Query: 1   TTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGN 60
           T +  P P+      R +   NG+ERPRFFD KAK  CWA ADIVPGRHP+RWRKD AGN
Sbjct: 14  TAAAVPPPSPPSSPSRSNVKSNGEERPRFFDGKAKNKCWANADIVPGRHPERWRKDVAGN 73

Query: 61  VVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYS 120
           +VCKRF NC GCLCFEYDHIVP+SKGGES AENCQILQTRVNRFKS +++VDA+ LK YS
Sbjct: 74  IVCKRFGNCNGCLCFEYDHIVPYSKGGESIAENCQILQTRVNRFKSAQENVDATTLKSYS 133

Query: 121 CDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPS 174
           C ++FTDKELD+IEMAVYGDV+RPG +CRC+TV+E+LGQ KSKD  A C+LPS
Sbjct: 134 CGLQFTDKELDVIEMAVYGDVLRPGKECRCKTVAELLGQSKSKDGKAACELPS 186

[Close]

BLAST of MC06g0206 vs. TAIR 10
Match: AT3G47490.1 (HNH endonuclease )

HSP 1 Score: 144.4 bits (363), Expect = 8.3e-35
Identity = 63/134 (47.01%), Postives = 86/134 (64.18%), Query Frame = 0


Query: 18  SGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEY 77
           SG G+ +  PR F    K  CW KA+ + GR P+RWR+D  GN+V ++   C GCLC +Y
Sbjct: 99  SGYGDPNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDY 158

Query: 78  DHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAV 137
           DHIVP+SKGG+ST ENCQ+LQ +VNR K +K D+  S+L   S   R   +++D+IE+  
Sbjct: 159 DHIVPYSKGGKSTLENCQVLQAKVNRSKGNKTDISRSELIQRSSYCRVAGRDMDLIELTA 218

Query: 138 YGDVIRPGNQCRCR 152
           YG+V R      CR
Sbjct: 219 YGNVQRAPTSSGCR 232

[Close]

BLAST of MC06g0206 vs. TAIR 10
Match: AT3G47490.3 (HNH endonuclease )

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-31
Identity = 63/154 (40.91%), Postives = 86/154 (55.84%), Query Frame = 0


Query: 18  SGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEY 77
           SG G+ +  PR F    K  CW KA+ + GR P+RWR+D  GN+V ++   C GCLC +Y
Sbjct: 60  SGYGDPNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDY 119

Query: 78  DHIVPFS--------------------KGGESTAENCQILQTRVNRFKSDKDDVDASQLK 137
           DHIVP+S                    KGG+ST ENCQ+LQ +VNR K +K D+  S+L 
Sbjct: 120 DHIVPYSKDMCPLEHAFDEPHKDFLDLKGGKSTLENCQVLQAKVNRSKGNKTDISRSELI 179

Query: 138 GYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCR 152
             S   R   +++D+IE+  YG+V R      CR
Sbjct: 180 QRSSYCRVAGRDMDLIELTAYGNVQRAPTSSGCR 213

[Close]

BLAST of MC06g0206 vs. TAIR 10
Match: AT3G47490.2 (HNH endonuclease )

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-17
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 18  SGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEY 77
           SG G+ +  PR F    K  CW KA+ + GR P+RWR+D  GN+V ++   C GCLC +Y
Sbjct: 99  SGYGDPNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDY 158

Query: 78  DHIVPFSK 86
           DHIVP+SK
Sbjct: 159 DHIVPYSK 166

The following BLAST results are available for this feature:

BLAST of MC06g0206 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g0206 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135260.1	3.89e-128	100.00	uncharacterized protein LOC111007267 [Momordica charantia]	[more]
XP_023531696.1	2.83e-119	94.74	uncharacterized protein LOC111793864 [Cucurbita pepo subsp. pepo] >KAG6587563.1 ...	[more]
XP_022933741.1	2.83e-119	94.74	uncharacterized protein LOC111441065 [Cucurbita moschata] >XP_022972986.1 unchar...	[more]
XP_038878253.1	2.24e-118	91.23	uncharacterized protein LOC120070538 [Benincasa hispida]	[more]
XP_008453224.1	7.50e-117	91.81	PREDICTED: uncharacterized protein LOC103494011 isoform X2 [Cucumis melo] >KAA00...	[more]

BLAST of MC06g0206 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0N7	1.88e-128	100.00	uncharacterized protein LOC111007267 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1I7G1	1.37e-119	94.74	uncharacterized protein LOC111471509 OS=Cucurbita maxima OX=3661 GN=LOC111471509...	[more]
A0A6J1EZW3	1.37e-119	94.74	uncharacterized protein LOC111441065 OS=Cucurbita moschata OX=3662 GN=LOC1114410...	[more]
A0A5A7UWI1	3.63e-117	91.81	HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002...	[more]
A0A1S3BVP6	3.63e-117	91.81	uncharacterized protein LOC103494011 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of MC06g0206 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18680.1	6.5e-72	70.52	HNH endonuclease domain-containing protein	[more]
AT3G47490.1	8.3e-35	47.01	HNH endonuclease	[more]
AT3G47490.3	3.3e-31	40.91	HNH endonuclease	[more]
AT3G47490.2	3.5e-17	50.00	HNH endonuclease	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002711	HNH endonuclease	PFAM	PF01844	HNH	coord: 63..97 e-value: 6.3E-5 score: 23.1
None	No IPR available	GENE3D	1.10.30.50		coord: 46..124 e-value: 9.2E-9 score: 36.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	PANTHER	PTHR33427:SF1	F6A14.21 PROTEIN	coord: 14..172
None	No IPR available	PANTHER	PTHR33427	HNH ENDONUCLEASE	coord: 14..172
IPR003615	HNH nuclease	CDD	cd00085	HNHc	coord: 64..103 e-value: 4.52231E-5 score: 37.8364

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0206.1	MC06g0206.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding