Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAAACCCACAAAGGGTTTTGGGGATGCTGTAGAGAGAAGGGGTGAAATACAAATACATGAGAGCGGTGAAGAAAATCGGCCACACAAACAGAACGTGGATGAAAATGTTGATTGGGTTGCTGTGATATGCGCCATAGAAGGCGAATTGCGTCTCCAAATCAAACAATCCAGTTTTTCCCAT mRNA sequence
CTCAAACCCACAAAGGGTTTTGGGGATGCTGTAGAGAGAAGGGGTGAAATACAAATACATGAGAGCGGTGAAGAAAATCGGCCACACAAACAGAACGTGGATGAAAATGTTGATTGGGTTGCTGTGATATGCGCCATAGAAGGCGAATTGCGTCTCCAAATCAAACAATCCAGTTTTTCCCAT Coding sequence (CDS)
CTCAAACCCACAAAGGGTTTTGGGGATGCTGTAGAGAGAAGGGGTGAAATACAAATACATGAGAGCGGTGAAGAAAATCGGCCACACAAACAGAACGTGGATGAAAATGTTGATTGGGTTGCTGTGATATGCGCCATAGAAGGCGAATTGCGTCTCCAAATCAAACAATCCAGTTTTTCCCAT Protein sequence
LKPTKGFGDAVERRGEIQIHESGEENRPHKQNVDENVDWVAVICAIEGELRLQIKQSSFSH
Homology
BLAST of MC06g0202 vs. NCBI nr
Match:
RZS17613.1 (hypothetical protein BHM03_00049778 [Ensete ventricosum])
HSP 1 Score: 48.1 bits (113), Expect = 2.39e-04
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0
Query: 8 GDAVERRGEIQIHESGEENRPHKQNVDENVDWVAVICAIEGELRLQIK 55 G ERRGE++ E G E+ P ++ VDE+V VAVI ++EGE+ LQI+ Sbjct: 604 GQVEERRGEVEEEEGGVEDWPDEEGVDEDVGRVAVIRSVEGEVLLQIE 651
BLAST of MC06g0202 vs. NCBI nr
Match:
RWW36492.1 (hypothetical protein BHE74_00058485 [Ensete ventricosum])
HSP 1 Score: 48.1 bits (113), Expect = 2.40e-04
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0
Query: 8 GDAVERRGEIQIHESGEENRPHKQNVDENVDWVAVICAIEGELRLQIK 55 G ERRGE++ E G E+ P ++ VDE+V VAVI ++EGE+ LQI+ Sbjct: 629 GQVEERRGEVEEEEGGVEDWPDEEGVDEDVGRVAVIRSVEGEVLLQIE 676
BLAST of MC06g0202 vs. NCBI nr
Match:
RWW31308.1 (hypothetical protein GW17_00004081 [Ensete ventricosum])
HSP 1 Score: 48.1 bits (113), Expect = 2.40e-04
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0
Query: 8 GDAVERRGEIQIHESGEENRPHKQNVDENVDWVAVICAIEGELRLQIK 55 G ERRGE++ E G E+ P ++ VDE+V VAVI ++EGE+ LQI+ Sbjct: 604 GQVEERRGEVEEEEGGVEDWPDEEGVDEDVGRVAVIRSVEGEVLLQIE 651
BLAST of MC06g0202 vs. ExPASy TrEMBL
Match:
A0A444G8U9 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00004081 PE=4 SV=1)
HSP 1 Score: 48.1 bits (113), Expect = 1.16e-04
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0
Query: 8 GDAVERRGEIQIHESGEENRPHKQNVDENVDWVAVICAIEGELRLQIK 55 G ERRGE++ E G E+ P ++ VDE+V VAVI ++EGE+ LQI+ Sbjct: 604 GQVEERRGEVEEEEGGVEDWPDEEGVDEDVGRVAVIRSVEGEVLLQIE 651
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
RZS17613.1 2.39e-04 50.00 hypothetical protein BHM03_00049778 [Ensete ventricosum] [more]
RWW36492.1 2.40e-04 50.00 hypothetical protein BHE74_00058485 [Ensete ventricosum] [more]
RWW31308.1 2.40e-04 50.00 hypothetical protein GW17_00004081 [Ensete ventricosum] [more]
Match Name E-value Identity Description
A0A444G8U9 1.16e-04 50.00 Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00004081 PE=4 SV=1 [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
C T C A A A C C C A C A A A G G G T T T T G G G G A T G C T G T A G A G A G A A G G G G T G A A A T A C A A A T A C A T G A G A G C G G T G A A G A A A A T C G G C C A C A C A A A C A G A A C G T G G A T G A A A A T G T T G A T T G G G T T G C T G T G A T A T G C G C C A T A G A A G G C G A A T T G C G T C T C C A A A T C A A A C A A T C C A G T T T T T C C C A T 20 40 60 80 100 120 140 160 180 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..32
Relationships
The following mRNA feature(s) are a part of this gene: