MC06g0199 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0199
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	MC06: 1588441 .. 1590170 (-)
RNA-Seq Expression	MC06g0199
Synteny	MC06g0199

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAGCCAGGGCCCCACAGCATCATTATTCGGCCAATGGAAACCAAGAAACAGATTCGAAGATATTACTCAAAGGATAAAGCGATAAGGCCCCATCGGTGCCTTCCCCAAATTCTGGCCGTTGGATCGCGGAAATCTTGGCTACCAACCGTCAGATCCGAAGAGCGAACGAGAACCACAAGCTTTAGCTTGGCATTGAAGTGAAGTTACAAAGGGCAGCAAATTAGTCCCCCATCTCTTACTCTGAAGATCCATTTTCTTCCTCAACCCCCCAAAACAAAAGATGGCAACCGTCACGACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCTCCCGGTCGAGGTTCCTATCTGGGTCTTCGAGTAAACTCCACCGCGAGCTGTCGGTTAAGCCCGTGGCCGCTTTGTCATCTTCATCCTTGAAGGTGGAAGCAAAGAAGGGAGAGTGGTTGCCAGGTCTGCCGTCTCCGGGATACCTGAATGGCAGGTAATGCACCCATACATGGATTAGTATTCACGCGATTCCGTCCAAAATTAATTGTCAACAAGAGAAATAGTCCAGTCTAAGTAGGATCTTGACATGTCCTTCGCAACCATGACTCTTTTGACTTGCTGAACTTGGTTGAATTCTATTTTTATACTGAATATTCGTTTGAGTTTCTGTGCTGGATGATAGAAGTAGTCACGTGGGATTGTGAACAAAATTTAGTTTTTCAAATTGTGTGAATTTGACTATATGATGTGGATATGTTGCAGTCTTCCGGGGGACAATGGATTCGATCCACTGGGGCTGGCGGAGGACCCAGAGAACTTGCGGTGGTTCGTGCAGGCGGAGCTGGTGAACGGGCGGTGGGCGATGCTGGGGGTGGCCGGAATGCTGCTGCCGGAGGTGTTTACGAAGATCGGAATCATAAACGCGCCGCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCGTCGTCGTCGACCCTGTTCGTGATCGAGTTCATTCTGTTCCATTACGTGGAAATCAGGAGATGGCAGGACATCAAAAACCCAGGCAGCGTCAACCAAGACCCCATTTTCAAGCAGTACAGTTTGCCCCCAAACGAAGTGGGCTACCCAGGCGGCATTTTCAACCCTCTCAACTTCGCTCCCACTCTCGAGGCCAAGGAGAAGGAGATCGCCAACGGTAATCAGAACAAACAACCAAATTTAAAGAAGATTTATGATATGTTGTTGTGATTTGTGAATGGGTTTGTTTGTTTTGTTTCAGGGAGACTGGCAATGTTGGCGTTCTTGGGGTTCATAGTTCAACATAATGTGACTGGAAAGGGGCCGTTTGAGAACCTTTTGCAGCACATTTCAGACCCGTGGCACAACACCATTGTCCAGACCTTCGGTGGGAATTAACTAAATTGGTTTCCAAATTGAAATTGAAATTGTTGTTAAGCATTGCGATGAACTGAAATTCTTTTGAGATGGAGTTTAGTGAATGTTAGTGTACAGGGGTGGGGGGATGAGGCTACCATGTGGCTTCCATGTTATGATGTTTAAATGAGACATTCCTTCACTTGATATATGAGTTGGGTTTTGCTTAGTTTCAACATTCAGATATTCACTTCACTTACAGTCAAATTCGAAGGTTGTTTATTTATTTTTTCAAGTTAGAGGTTTGAACCCTTCAATTTCGATCCAACTTTTCACATTTTTTCTCCGGAACAAAGGAAATCAAAATATAGTTTTGTC

mRNA sequence

CACAGCCAGGGCCCCACAGCATCATTATTCGGCCAATGGAAACCAAGAAACAGATTCGAAGATATTACTCAAAGGATAAAGCGATAAGGCCCCATCGGTGCCTTCCCCAAATTCTGGCCGTTGGATCGCGGAAATCTTGGCTACCAACCGTCAGATCCGAAGAGCGAACGAGAACCACAAGCTTTAGCTTGGCATTGAAGTGAAGTTACAAAGGGCAGCAAATTAGTCCCCCATCTCTTACTCTGAAGATCCATTTTCTTCCTCAACCCCCCAAAACAAAAGATGGCAACCGTCACGACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCTCCCGGTCGAGGTTCCTATCTGGGTCTTCGAGTAAACTCCACCGCGAGCTGTCGGTTAAGCCCGTGGCCGCTTTGTCATCTTCATCCTTGAAGGTGGAAGCAAAGAAGGGAGAGTGGTTGCCAGGTCTGCCGTCTCCGGGATACCTGAATGGCAGTCTTCCGGGGGACAATGGATTCGATCCACTGGGGCTGGCGGAGGACCCAGAGAACTTGCGGTGGTTCGTGCAGGCGGAGCTGGTGAACGGGCGGTGGGCGATGCTGGGGGTGGCCGGAATGCTGCTGCCGGAGGTGTTTACGAAGATCGGAATCATAAACGCGCCGCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCGTCGTCGTCGACCCTGTTCGTGATCGAGTTCATTCTGTTCCATTACGTGGAAATCAGGAGATGGCAGGACATCAAAAACCCAGGCAGCGTCAACCAAGACCCCATTTTCAAGCAGTACAGTTTGCCCCCAAACGAAGTGGGCTACCCAGGCGGCATTTTCAACCCTCTCAACTTCGCTCCCACTCTCGAGGCCAAGGAGAAGGAGATCGCCAACGGGAGACTGGCAATGTTGGCGTTCTTGGGGTTCATAGTTCAACATAATGTGACTGGAAAGGGGCCGTTTGAGAACCTTTTGCAGCACATTTCAGACCCGTGGCACAACACCATTGTCCAGACCTTCGGTGGGAATTAACTAAATTGGTTTCCAAATTGAAATTGAAATTGTTGTTAAGCATTGCGATGAACTGAAATTCTTTTGAGATGGAGTTTAGTGAATGTTAGTGTACAGGGGTGGGGGGATGAGGCTACCATGTGGCTTCCATGTTATGATGTTTAAATGAGACATTCCTTCACTTGATATATGAGTTGGGTTTTGCTTAGTTTCAACATTCAGATATTCACTTCACTTACAGTCAAATTCGAAGGTTGTTTATTTATTTTTTCAAGTTAGAGGTTTGAACCCTTCAATTTCGATCCAACTTTTCACATTTTTTCTCCGGAACAAAGGAAATCAAAATATAGTTTTGTC

Coding sequence (CDS)

ATGGCAACCGTCACGACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCTCCCGGTCGAGGTTCCTATCTGGGTCTTCGAGTAAACTCCACCGCGAGCTGTCGGTTAAGCCCGTGGCCGCTTTGTCATCTTCATCCTTGAAGGTGGAAGCAAAGAAGGGAGAGTGGTTGCCAGGTCTGCCGTCTCCGGGATACCTGAATGGCAGTCTTCCGGGGGACAATGGATTCGATCCACTGGGGCTGGCGGAGGACCCAGAGAACTTGCGGTGGTTCGTGCAGGCGGAGCTGGTGAACGGGCGGTGGGCGATGCTGGGGGTGGCCGGAATGCTGCTGCCGGAGGTGTTTACGAAGATCGGAATCATAAACGCGCCGCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCGTCGTCGTCGACCCTGTTCGTGATCGAGTTCATTCTGTTCCATTACGTGGAAATCAGGAGATGGCAGGACATCAAAAACCCAGGCAGCGTCAACCAAGACCCCATTTTCAAGCAGTACAGTTTGCCCCCAAACGAAGTGGGCTACCCAGGCGGCATTTTCAACCCTCTCAACTTCGCTCCCACTCTCGAGGCCAAGGAGAAGGAGATCGCCAACGGGAGACTGGCAATGTTGGCGTTCTTGGGGTTCATAGTTCAACATAATGTGACTGGAAAGGGGCCGTTTGAGAACCTTTTGCAGCACATTTCAGACCCGTGGCACAACACCATTGTCCAGACCTTCGGTGGGAATTAA

Protein sequence

MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGGN

Homology

[Close]

BLAST of MC06g0199 vs. ExPASy Swiss-Prot
Match: Q9SQL2 (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.4e-128
Identity = 220/252 (87.30%), Postives = 230/252 (91.27%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL 60
           MATVTTQASAA+F PC  +SRFL GSS KL+R ++ +PV    S+S KVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGL 60

Query: 61  PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
            SPGYL GSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT IGI
Sbjct: 61  ASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           IN P+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  
Sbjct: 121 INVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAG 180

Query: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240
           EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPF+NLLQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDP 240

Query: 241 WHNTIVQTFGGN 253
           WHNTIVQT GGN
Sbjct: 241 WHNTIVQTLGGN 252

[Close]

BLAST of MC06g0199 vs. ExPASy Swiss-Prot
Match: P27521 (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 4.2e-125
Identity = 213/250 (85.20%), Postives = 230/250 (92.00%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPV-AALSSSSLKVEAKKGEWLPG 60
           MATVTT ASA++FRPC S+ RFL+GSS +L+R+LS   + ++  +SS KVEAKKGEWLPG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 61  LPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120
           L SP YL GSL GDNGFDPLGLAEDPENL+WFVQAELVNGRWAMLGVAGMLLPEVFTKIG
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 121 IINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPP 180
           IIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 181 NEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISD 240
            EVGYPGGIFNPLNFAPT EAKEKE+ANGRLAMLAFLGF+VQHNVTGKGPFENLLQH+SD
Sbjct: 181 GEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSD 240

Query: 241 PWHNTIVQTF 250
           PWHNTIVQTF
Sbjct: 241 PWHNTIVQTF 250

[Close]

BLAST of MC06g0199 vs. ExPASy Swiss-Prot
Match: Q36718 (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare OX=4513 GN=LHC Ib-20 PE=1 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 7.0e-88
Identity = 161/240 (67.08%), Postives = 182/240 (75.83%), Query Frame = 0


Query: 13  FRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPG 72
           FR     S   SGS     R+++V+               KG WLPGL SP YL+GSL G
Sbjct: 7   FRTRVPPSPAASGSPRSTRRDVAVQ--------------AKGSWLPGLQSPAYLDGSLEG 66

Query: 73  DNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYD-AGK 132
           DNGFDPL LAEDPE+LRWFVQA++VNGRWAMLGVAGML+PEV TK G++NAP+W    GK
Sbjct: 67  DNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGK 126

Query: 133 AEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNP 192
             YFASSST   +  +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP+E GYPG +FNP
Sbjct: 127 ETYFASSSTALRVH-MSSTYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNP 186

Query: 193 LNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFGG 252
           LNFAP LE KEKE+ANGRLAMLAFLGF+VQHNV GKGPFENL QH++DPWHNTI+QT  G
Sbjct: 187 LNFAP-LENKEKELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTISG 230

[Close]

BLAST of MC06g0199 vs. ExPASy Swiss-Prot
Match: Q9SYW8 (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.3e-62
Identity = 125/250 (50.00%), Postives = 158/250 (63.20%), Query Frame = 0


Query: 8   ASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGE--WLPGLPSPGY 67
           AS+A+     S   FL G   +L ++L+V  V+   +S   V A      W PG   P +
Sbjct: 7   ASSAI--AAISSPSFLGGKKLRLKKKLTVPAVSRPDASVRAVAADPDRPIWFPGSTPPEW 66

Query: 68  LNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ 127
           L+GSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAMLG AG+ +PE  TKIGI+N P 
Sbjct: 67  LDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNTPS 126

Query: 128 WYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYP 187
           WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   +VGYP
Sbjct: 127 WYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFPNNKLTGTDVGYP 186

Query: 188 GGI-FNPLNF-----APTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISD 247
           GG+ F+PL +     A   E + KEI NGRLAMLA +G   QH  TG GP +NL  H++D
Sbjct: 187 GGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLAD 246

Query: 248 PWHNTIVQTF 250
           P H TI   F
Sbjct: 247 PGHATIFAAF 254

[Close]

BLAST of MC06g0199 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 5.1e-62
Identity = 116/239 (48.54%), Postives = 154/239 (64.44%), Query Frame = 0


Query: 17  ASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGF 76
           A+++ FL G   ++ + ++     +++ S++  +  +  W PG   P +L+GSLPGD GF
Sbjct: 29  ATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGF 88

Query: 77  DPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFA 136
           DPLGL  DPE+L+W  QAELV+ RWAMLG AG+ +PE  TKIG++N P WY AG+ EYF 
Sbjct: 89  DPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFT 148

Query: 137 SSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF- 196
            ++TLFVIE +L  + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL + 
Sbjct: 149 DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 208

Query: 197 ----APTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTF 250
               A   E + KEI NGRLAMLA +G   QH  TG GP +NL  H++DP H TI   F
Sbjct: 209 SGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAF 267

[Close]

BLAST of MC06g0199 vs. NCBI nr
Match: XP_022134700.1 (chlorophyll a-b binding protein P4, chloroplastic [Momordica charantia])

HSP 1 Score: 514 bits (1323), Expect = 7.40e-184
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL 60

Query: 61  PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240
           EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTFGGN
Sbjct: 241 WHNTIVQTFGGN 252

[Close]

BLAST of MC06g0199 vs. NCBI nr
Match: XP_038880569.1 (chlorophyll a-b binding protein P4, chloroplastic [Benincasa hispida])

HSP 1 Score: 499 bits (1284), Expect = 6.54e-178
Identity = 243/252 (96.43%), Postives = 246/252 (97.62%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCA+RSRFLSGSS KLHRELSVKPV+A SSSS KVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240
           E GYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDP
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTFGGN
Sbjct: 241 WHNTIVQTFGGN 252

[Close]

BLAST of MC06g0199 vs. NCBI nr
Match: XP_008453211.1 (PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo] >KAA0057949.1 chlorophyll a-b binding protein P4 [Cucumis melo var. makuwa])

HSP 1 Score: 495 bits (1275), Expect = 1.54e-176
Identity = 241/252 (95.63%), Postives = 245/252 (97.22%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCA+RSRFLSGSS KLHR LSVKPV+A SSSS KVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240
           E GYPGGIFNPLNFAPTLEAKEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDP
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTFGGN
Sbjct: 241 WHNTIVQTFGGN 252

[Close]

BLAST of MC06g0199 vs. NCBI nr
Match: XP_022933773.1 (chlorophyll a-b binding protein P4, chloroplastic [Cucurbita moschata] >KAG6587545.1 Chlorophyll a-b binding protein P4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 493 bits (1270), Expect = 8.92e-176
Identity = 243/252 (96.43%), Postives = 244/252 (96.83%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL 60
           MATVTTQASAAVFRP ASRSRFL+GS  KLHRELSVKPVAA  SSS KVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPFASRSRFLTGSFGKLHRELSVKPVAASPSSSFKVEAKKGEWLPGL 60

Query: 61  PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSL GDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLAGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240
           EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTFGGN
Sbjct: 241 WHNTIVQTFGGN 252

[Close]

BLAST of MC06g0199 vs. NCBI nr
Match: XP_023516219.1 (chlorophyll a-b binding protein P4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493 bits (1270), Expect = 8.92e-176
Identity = 241/252 (95.63%), Postives = 244/252 (96.83%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCA+RSRFL+GSS KLHR LSVKPVAA SSSS KVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVAASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPL LAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLSLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240
           EVGYPGGIFNPLNFAPT EAKEKE+ANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTF GN
Sbjct: 241 WHNTIVQTFSGN 252

[Close]

BLAST of MC06g0199 vs. ExPASy TrEMBL
Match: A0A6J1BZ19 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006907 PE=3 SV=1)

HSP 1 Score: 514 bits (1323), Expect = 3.58e-184
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL 60

Query: 61  PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240
           EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTFGGN
Sbjct: 241 WHNTIVQTFGGN 252

[Close]

BLAST of MC06g0199 vs. ExPASy TrEMBL
Match: A0A5A7UWR2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002520 PE=3 SV=1)

HSP 1 Score: 495 bits (1275), Expect = 7.46e-177
Identity = 241/252 (95.63%), Postives = 245/252 (97.22%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCA+RSRFLSGSS KLHR LSVKPV+A SSSS KVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240
           E GYPGGIFNPLNFAPTLEAKEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDP
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTFGGN
Sbjct: 241 WHNTIVQTFGGN 252

[Close]

BLAST of MC06g0199 vs. ExPASy TrEMBL
Match: A0A1S3BV45 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493999 PE=3 SV=1)

HSP 1 Score: 495 bits (1275), Expect = 7.46e-177
Identity = 241/252 (95.63%), Postives = 245/252 (97.22%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCA+RSRFLSGSS KLHR LSVKPV+A SSSS KVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPN 180

Query: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240
           E GYPGGIFNPLNFAPTLEAKEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDP
Sbjct: 181 ECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTFGGN
Sbjct: 241 WHNTIVQTFGGN 252

[Close]

BLAST of MC06g0199 vs. ExPASy TrEMBL
Match: A0A6J1F5S4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441087 PE=3 SV=1)

HSP 1 Score: 493 bits (1270), Expect = 4.32e-176
Identity = 243/252 (96.43%), Postives = 244/252 (96.83%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL 60
           MATVTTQASAAVFRP ASRSRFL+GS  KLHRELSVKPVAA  SSS KVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPFASRSRFLTGSFGKLHRELSVKPVAASPSSSFKVEAKKGEWLPGL 60

Query: 61  PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSL GDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLAGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240
           EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTFGGN
Sbjct: 241 WHNTIVQTFGGN 252

[Close]

BLAST of MC06g0199 vs. ExPASy TrEMBL
Match: A0A6J1JG60 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111484821 PE=3 SV=1)

HSP 1 Score: 492 bits (1267), Expect = 1.24e-175
Identity = 240/252 (95.24%), Postives = 244/252 (96.83%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGL 60
           MATVTTQASAAVFRPCA+RSRFL+GSS KLHR LSVKPVAA SSSS KVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVAASSSSSFKVEAKKGEWLPGL 60

Query: 61  PSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120
           PSP YLNGSLPGDNGFDPL LAEDPENL+WFVQAELVNGRWAMLGVAGMLLPEVFTKIGI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240
           EVGYPGGIFNPLNFAPT EAKEKE+ANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 240

Query: 241 WHNTIVQTFGGN 252
           WHNTIVQTF GN
Sbjct: 241 WHNTIVQTFSGN 252

[Close]

BLAST of MC06g0199 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 448.7 bits (1153), Expect = 3.0e-126
Identity = 213/250 (85.20%), Postives = 230/250 (92.00%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCASRSRFLSGSSSKLHRELSVKPV-AALSSSSLKVEAKKGEWLPG 60
           MATVTT ASA++FRPC S+ RFL+GSS +L+R+LS   + ++  +SS KVEAKKGEWLPG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 61  LPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120
           L SP YL GSL GDNGFDPLGLAEDPENL+WFVQAELVNGRWAMLGVAGMLLPEVFTKIG
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 121 IINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPP 180
           IIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 181 NEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISD 240
            EVGYPGGIFNPLNFAPT EAKEKE+ANGRLAMLAFLGF+VQHNVTGKGPFENLLQH+SD
Sbjct: 181 GEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSD 240

Query: 241 PWHNTIVQTF 250
           PWHNTIVQTF
Sbjct: 241 PWHNTIVQTF 250

[Close]

BLAST of MC06g0199 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 240.4 bits (612), Expect = 1.6e-63
Identity = 125/250 (50.00%), Postives = 158/250 (63.20%), Query Frame = 0


Query: 8   ASAAVFRPCASRSRFLSGSSSKLHRELSVKPVAALSSSSLKVEAKKGE--WLPGLPSPGY 67
           AS+A+     S   FL G   +L ++L+V  V+   +S   V A      W PG   P +
Sbjct: 7   ASSAI--AAISSPSFLGGKKLRLKKKLTVPAVSRPDASVRAVAADPDRPIWFPGSTPPEW 66

Query: 68  LNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ 127
           L+GSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAMLG AG+ +PE  TKIGI+N P 
Sbjct: 67  LDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNTPS 126

Query: 128 WYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYP 187
           WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   +VGYP
Sbjct: 127 WYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFPNNKLTGTDVGYP 186

Query: 188 GGI-FNPLNF-----APTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISD 247
           GG+ F+PL +     A   E + KEI NGRLAMLA +G   QH  TG GP +NL  H++D
Sbjct: 187 GGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLAD 246

Query: 248 PWHNTIVQTF 250
           P H TI   F
Sbjct: 247 PGHATIFAAF 254

[Close]

BLAST of MC06g0199 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 214.5 bits (545), Expect = 9.5e-56
Identity = 112/232 (48.28%), Postives = 154/232 (66.38%), Query Frame = 0


Query: 26  SSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDP 85
           +SS + R +S    AA    +  V  ++  WLPGL  P YL+G+L GD GFDPLGL EDP
Sbjct: 20  ASSVITRRIS-SVKAAGGGINPTVAVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDP 79

Query: 86  ENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEY-FASSSTLFVI 145
           E+L+W+VQAELV+ R+AMLGVAG+L  ++    GI N P WY+AG  ++ FAS+ TL V+
Sbjct: 80  ESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVV 139

Query: 146 EFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNEVGYPGG-IFNPLNFAPTLEA 205
           +F+L  + E +R+ D  +PGS  ++  F    + +L   E GYPGG + NPL  A  ++ 
Sbjct: 140 QFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQN 199

Query: 206 ----KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQT 249
               K KEI NGRLAM+A LGF VQ +VT  GP +NL++H+S+PWH TI+QT
Sbjct: 200 AHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQT 250

[Close]

BLAST of MC06g0199 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 214.5 bits (545), Expect = 9.5e-56
Identity = 112/232 (48.28%), Postives = 154/232 (66.38%), Query Frame = 0


Query: 26  SSSKLHRELSVKPVAALSSSSLKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDP 85
           +SS + R +S    AA    +  V  ++  WLPGL  P YL+G+L GD GFDPLGL EDP
Sbjct: 20  ASSVITRRIS-SVKAAGGGINPTVAVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDP 79

Query: 86  ENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEY-FASSSTLFVI 145
           E+L+W+VQAELV+ R+AMLGVAG+L  ++    GI N P WY+AG  ++ FAS+ TL V+
Sbjct: 80  ESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVV 139

Query: 146 EFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNEVGYPGG-IFNPLNFAPTLEA 205
           +F+L  + E +R+ D  +PGS  ++  F    + +L   E GYPGG + NPL  A  ++ 
Sbjct: 140 QFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQN 199

Query: 206 ----KEKEIANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQT 249
               K KEI NGRLAM+A LGF VQ +VT  GP +NL++H+S+PWH TI+QT
Sbjct: 200 AHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQT 250

[Close]

BLAST of MC06g0199 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 211.5 bits (537), Expect = 8.1e-55
Identity = 110/259 (42.47%), Postives = 151/259 (58.30%), Query Frame = 0


Query: 1   MATVTTQASAAVFRPCASRSRFLSGSSS--KLHRE--LSVKPVAALSSSSLKVEAKKGEW 60
           + +  T +++ V  P   R    S SS+  +L RE  + V+    +SS    +   +  W
Sbjct: 9   LTSTLTLSTSRVQNPTQRRPHVASTSSTGGRLMRERLVVVRAGKEVSSVCEPLPPDRPLW 68

Query: 61  LPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT 120
            PG   P +L+GSLPGD GFDPLGL  DP+ L+WF QAEL++ RWAML V G+++PE   
Sbjct: 69  FPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLE 128

Query: 121 KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYS 180
           ++G I    WYDAG  EYFA S+TLFV + +L  + E RRW D+  PGSV+ +P +    
Sbjct: 129 RLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYPHKV 188

Query: 181 LPPNEVGYPGGIFNPLNF------APTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPF 240
            P  +VGYPGG++            P +  + KEI NGRLAMLAFLGF  Q   T + P 
Sbjct: 189 NPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQATYTSQDPI 248

Query: 241 ENLLQHISDPWHNTIVQTF 250
           ENL+ H++DP H  +   F
Sbjct: 249 ENLMAHLADPGHCNVFSAF 267

The following BLAST results are available for this feature:

BLAST of MC06g0199 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQL2	1.4e-128	87.30	Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lh...	[more]
P27521	4.2e-125	85.20	Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q36718	7.0e-88	67.08	Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulga...	[more]
Q9SYW8	2.3e-62	50.00	Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th...	[more]
P13869	5.1e-62	48.54	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]

BLAST of MC06g0199 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134700.1	7.40e-184	100.00	chlorophyll a-b binding protein P4, chloroplastic [Momordica charantia]	[more]
XP_038880569.1	6.54e-178	96.43	chlorophyll a-b binding protein P4, chloroplastic [Benincasa hispida]	[more]
XP_008453211.1	1.54e-176	95.63	PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo] >KAA...	[more]
XP_022933773.1	8.92e-176	96.43	chlorophyll a-b binding protein P4, chloroplastic [Cucurbita moschata] >KAG65875...	[more]
XP_023516219.1	8.92e-176	95.63	chlorophyll a-b binding protein P4, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC06g0199 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZ19	3.58e-184	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A5A7UWR2	7.46e-177	95.63	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BV45	7.46e-177	95.63	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1F5S4	4.32e-176	96.43	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JG60	1.24e-175	95.24	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of MC06g0199 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47470.1	3.0e-126	85.20	light-harvesting chlorophyll-protein complex I subunit A4	[more]
AT3G61470.1	1.6e-63	50.00	photosystem I light harvesting complex gene 2	[more]
AT1G45474.1	9.5e-56	48.28	photosystem I light harvesting complex gene 5	[more]
AT1G45474.2	9.5e-56	48.28	photosystem I light harvesting complex gene 5	[more]
AT1G19150.1	8.1e-55	42.47	photosystem I light harvesting complex gene 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 63..242 e-value: 3.2E-67 score: 228.1
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 63..222 e-value: 2.7E-48 score: 164.5
None	No IPR available	PANTHER	PTHR21649:SF109	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 1..252
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 53..249
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0199.1	MC06g0199.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009409	response to cold
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009645	response to low light intensity stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019904	protein domain specific binding