MC06g0054 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0054
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	MYND-type domain-containing protein
Location	MC06: 357247 .. 358906 (+)
RNA-Seq Expression	MC06g0054
Synteny	MC06g0054

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGGAGGTCCCACCCGCAAACGCAAGGCAACGTAGTGGTGGTTGCCATGCCTGTATATAAAAACTACCCCGTTGGAATTCGTCTTTACCGAACGCACAGAGAAATTAAAAGACGAACCAGAACGGTTACATTTCCCATACCAGAGAAGAGAAGAGAAGACGCCGCCGCCGCTTCCGAACTTCAAAATCTGACTCTTACGCATGTAACCAAGCCGGCCCCATGATTCCCTCCAAGAGGCCAAGAACATGCCGGAAACCCGCCGCAGATTCCGATCTCTTCGATGTCTTGCCGGACGATCTCCTAATTCACCTCCTCCGCCGCCTCGCCTCCTCCGCCTCCTCCCCTTCCGACCTCCTCAATCTTCTGTTAACGTACGCGCTCGCCTTTTTACAAGGAACAATTAGAGATTCTTTTTAATTTCCTCTGTTTTCTCCTGTTGATTTTGCAATCGAGGTTTTCGATTTTGCTTGGTTCTTAAATTTCTCGTCGTTTTTGCAGATGCAAGAGGTTGAATCGCCTGGCTCTTCATCCTTTGGTGTTGTCTAAAGCCGGACCGAAAGCGTTTGCAGTTAAAACCGAAAACTGGTGCGAGTCCGCTCACCGATTCCTCAAACGCTGCGTTGAAGCCGGCAACTCAGAAGCAAGTTACACGCTCGGAATGGTCAGTATTTTGTTGATTTCTGGGAGAAATTGAATAATAAATATTAATTACTCTCGACGAAATGCGAAATGATGTCTGTGTTTTCTTCTCCCCTGTAGATCCGATTTTATTGCTTGAGAAATCGAGGGAGTGGAGCTTCTTTAATGGCGAAAGCAGCCATCAAATCTCACGCTCCGGCGCTCTACTCGCTCGCCGTGATTCAATTCAACGGCAGCGGCGGCTCTAAGAGCGACAAGGACCTCCAAGCCGGAGTAGCCCTATGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCGCTTCGCGAACTCGGCCATTGCCTTCAAGACGGTTACGGCGTGCGCCGAAACACCGACGAAGGCCGCCGCCTGCTGATCCAAGCCAACGCCCGTGAGCTTTCTTCCGTCCTAATCTCCTCCTCCAGGGTATGCCAGCAGCGCCACCACGGCGGCCTTCTCGATTTGACAGCCAGTACAAGTTGTTTGTTGCTGAGTGATTTCGGCTGTAACATTCCGGCGCCGGAGCCACATCCGGTGAACTTGTTTTTGAGAGAGTGGTTTGAGACGGAACGTCGAGCGATGGCGCGTCAGGGGCTGAGACTCTGCTCGCACGCCGGATGCGGCCGGCCGGAGACTCGACCGCGCGAGTTCCGACGGTGCTCGGTCTGCGGCACGGTGAATTATTGTTCTCGAGGATGCCAGGCGCAGGATTGGAAACTCCGCCATAAGGTGGGCTGCAGACCAATTGAGCAGTGGCGAAATGAGGCTGAGAACGATCCCGGCGGCGTATTTGCTATGGTAGAAGAGTAGGAGCGCAACGTCGTGGGTATTGTATGACGACAGCGCTGTAATTAAAGTTATTTATGAAATTTTATAAAACATTATCTTTTTTTTTCCTTTTTCCTTCGATTTTATTATTGGGTTCTTCAAATTAACCATTTTTGTACCAAAAAGAAAAGTCCTATCATATTGGGAGACTACATCAGAAGCAACGATAACCGAC

mRNA sequence

GCGGAGGTCCCACCCGCAAACGCAAGGCAACGTAGTGGTGGTTGCCATGCCTGTATATAAAAACTACCCCGTTGGAATTCGTCTTTACCGAACGCACAGAGAAATTAAAAGACGAACCAGAACGGTTACATTTCCCATACCAGAGAAGAGAAGAGAAGACGCCGCCGCCGCTTCCGAACTTCAAAATCTGACTCTTACGCATGTAACCAAGCCGGCCCCATGATTCCCTCCAAGAGGCCAAGAACATGCCGGAAACCCGCCGCAGATTCCGATCTCTTCGATGTCTTGCCGGACGATCTCCTAATTCACCTCCTCCGCCGCCTCGCCTCCTCCGCCTCCTCCCCTTCCGACCTCCTCAATCTTCTGTTAACATGCAAGAGGTTGAATCGCCTGGCTCTTCATCCTTTGGTGTTGTCTAAAGCCGGACCGAAAGCGTTTGCAGTTAAAACCGAAAACTGGTGCGAGTCCGCTCACCGATTCCTCAAACGCTGCGTTGAAGCCGGCAACTCAGAAGCAAGTTACACGCTCGGAATGATCCGATTTTATTGCTTGAGAAATCGAGGGAGTGGAGCTTCTTTAATGGCGAAAGCAGCCATCAAATCTCACGCTCCGGCGCTCTACTCGCTCGCCGTGATTCAATTCAACGGCAGCGGCGGCTCTAAGAGCGACAAGGACCTCCAAGCCGGAGTAGCCCTATGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCGCTTCGCGAACTCGGCCATTGCCTTCAAGACGGTTACGGCGTGCGCCGAAACACCGACGAAGGCCGCCGCCTGCTGATCCAAGCCAACGCCCGTGAGCTTTCTTCCGTCCTAATCTCCTCCTCCAGGGTATGCCAGCAGCGCCACCACGGCGGCCTTCTCGATTTGACAGCCAGTACAAGTTGTTTGTTGCTGAGTGATTTCGGCTGTAACATTCCGGCGCCGGAGCCACATCCGGTGAACTTGTTTTTGAGAGAGTGGTTTGAGACGGAACGTCGAGCGATGGCGCGTCAGGGGCTGAGACTCTGCTCGCACGCCGGATGCGGCCGGCCGGAGACTCGACCGCGCGAGTTCCGACGGTGCTCGGTCTGCGGCACGGTGAATTATTGTTCTCGAGGATGCCAGGCGCAGGATTGGAAACTCCGCCATAAGGTGGGCTGCAGACCAATTGAGCAGTGGCGAAATGAGGCTGAGAACGATCCCGGCGGCGTATTTGCTATGGTAGAAGAGTAGGAGCGCAACGTCGTGGGTATTGTATGACGACAGCGCTGTAATTAAAGTTATTTATGAAATTTTATAAAACATTATCTTTTTTTTTCCTTTTTCCTTCGATTTTATTATTGGGTTCTTCAAATTAACCATTTTTGTACCAAAAAGAAAAGTCCTATCATATTGGGAGACTACATCAGAAGCAACGATAACCGAC

Coding sequence (CDS)

ATGATTCCCTCCAAGAGGCCAAGAACATGCCGGAAACCCGCCGCAGATTCCGATCTCTTCGATGTCTTGCCGGACGATCTCCTAATTCACCTCCTCCGCCGCCTCGCCTCCTCCGCCTCCTCCCCTTCCGACCTCCTCAATCTTCTGTTAACATGCAAGAGGTTGAATCGCCTGGCTCTTCATCCTTTGGTGTTGTCTAAAGCCGGACCGAAAGCGTTTGCAGTTAAAACCGAAAACTGGTGCGAGTCCGCTCACCGATTCCTCAAACGCTGCGTTGAAGCCGGCAACTCAGAAGCAAGTTACACGCTCGGAATGATCCGATTTTATTGCTTGAGAAATCGAGGGAGTGGAGCTTCTTTAATGGCGAAAGCAGCCATCAAATCTCACGCTCCGGCGCTCTACTCGCTCGCCGTGATTCAATTCAACGGCAGCGGCGGCTCTAAGAGCGACAAGGACCTCCAAGCCGGAGTAGCCCTATGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCGCTTCGCGAACTCGGCCATTGCCTTCAAGACGGTTACGGCGTGCGCCGAAACACCGACGAAGGCCGCCGCCTGCTGATCCAAGCCAACGCCCGTGAGCTTTCTTCCGTCCTAATCTCCTCCTCCAGGGTATGCCAGCAGCGCCACCACGGCGGCCTTCTCGATTTGACAGCCAGTACAAGTTGTTTGTTGCTGAGTGATTTCGGCTGTAACATTCCGGCGCCGGAGCCACATCCGGTGAACTTGTTTTTGAGAGAGTGGTTTGAGACGGAACGTCGAGCGATGGCGCGTCAGGGGCTGAGACTCTGCTCGCACGCCGGATGCGGCCGGCCGGAGACTCGACCGCGCGAGTTCCGACGGTGCTCGGTCTGCGGCACGGTGAATTATTGTTCTCGAGGATGCCAGGCGCAGGATTGGAAACTCCGCCATAAGGTGGGCTGCAGACCAATTGAGCAGTGGCGAAATGAGGCTGAGAACGATCCCGGCGGCGTATTTGCTATGGTAGAAGAGTAG

Protein sequence

MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRHHGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGVFAMVEE

Homology

[Close]

BLAST of MC06g0054 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 7.7e-122
Identity = 212/323 (65.63%), Postives = 250/323 (77.40%), Query Frame = 0


Query: 17  SDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVK 76
           +DL D +PDDL+I +L +L S++  P+D +N+LLTCKRL  LA++P+VLS+  PKA AVK
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 77  TENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSL 136
             NW E +HRFLKRCV+AG+ EA YTLGMIRFYCL+NRG+GASLMAKAAI SHAPALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 137 AVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLL 196
           AVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQDGYGV +N  EGRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 197 IQANARELSSVLIS-----SSRVCQQRHHGGLLDLTASTSCLLLSDFGCNIPAPEPHPVN 256
           +QANAREL++VL S     S+ +   +    ++      +C LLSDFGCN+PAPE HP N
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 257 LFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKL 316
            FL +WF          GLRLCSHAGCGRPETR  EFRRCSVCG VNYCSR CQA DWKL
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 317 RHKVGCRPIEQWRNEAENDPGGV 335
           RHK+ C P+++W  E +   G V
Sbjct: 341 RHKMDCAPVQRWLEEGDGGEGNV 363

[Close]

BLAST of MC06g0054 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 4.7e-111
Identity = 202/304 (66.45%), Postives = 236/304 (77.63%), Query Frame = 0


Query: 20  FDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTEN 79
           F+ L DDL+I +LR+LA+SASSPSD L +L TCKRLNRL LHPLVLSKAG +  AV  E 
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 80  WCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVI 139
           W +S+H+FLK CV AGN +ASY+LGMIRFYCL+N  SGASLMAKAAIKSHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 140 QFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQA 199
           QFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV R+  EGRRLLIQA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 200 NARELSSVLISSSRVCQQRHHGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFE 259
           NAREL+  L S   +     +  L DL+              +P  E HPVN FL+EWF 
Sbjct: 202 NARELACSLRSYLSLKSGDENETLTDLSV-------------VPVQEIHPVNRFLKEWFS 261

Query: 260 TERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCRP 319
           + R  +A +GLR+CSH GCGRPETR  EFRRCSVCG VNYCSRGCQA DW+ +HKV C P
Sbjct: 262 SGRVDLA-EGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVECTP 311

Query: 320 IEQW 324
           ++ W
Sbjct: 322 LDLW 311

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BLAST of MC06g0054 vs. ExPASy Swiss-Prot
Match: Q03162 (MYND-type zinc finger protein MUB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MUB1 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.0e-05
Identity = 23/66 (34.85%), Postives = 33/66 (50.00%), Query Frame = 0


Query: 269 GLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCRPIEQWRNEAE 328
           G+R C++  CG+ E  PR+F +C  C    YCSR CQ + W   H+  C  +      + 
Sbjct: 508 GVRQCANFSCGKWEDFPRQFAKCRRCKRTKYCSRKCQLKAWGY-HRYWCHEVGSSHMRST 567

Query: 329 NDPGGV 335
           N   GV
Sbjct: 568 NTTTGV 572

[Close]

BLAST of MC06g0054 vs. ExPASy Swiss-Prot
Match: Q09415 (SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=4 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 5.9e-05
Identity = 24/53 (45.28%), Postives = 31/53 (58.49%), Query Frame = 0


Query: 278 CGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCRPIEQWRNEAEND 331
           C +  T   E ++CS C  + YCS+ CQ  DWKL HKV C+ I+   NE  ND
Sbjct: 26  CNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVECKAIKT-HNEVAND 76

[Close]

BLAST of MC06g0054 vs. NCBI nr
Match: XP_023516460.1 (F-box protein At1g67340-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 577 bits (1488), Expect = 7.25e-206
Identity = 290/343 (84.55%), Postives = 310/343 (90.38%), Query Frame = 0


Query: 1   MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLAL 60
           MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLNLLLTCKRLNRL L
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAV+ E WC+SAHRFLKRCV+AGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDF 240
           DGYGVRRN+DEGRRLLIQANAREL++VL+SSSRV QQRHH  G L DLTA T C LLSDF
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTA-TRCSLLSDF 240

Query: 241 GCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN 300
           GC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRP EFRRCS+CGTVN
Sbjct: 241 GCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVN 300

Query: 301 YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEE 340
           YCSRGCQAQDWK+RHK  C  +++W++ E +N  GG+F  VEE
Sbjct: 301 YCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGIFNAVEE 342

[Close]

BLAST of MC06g0054 vs. NCBI nr
Match: XP_022921747.1 (F-box protein At1g67340-like [Cucurbita moschata])

HSP 1 Score: 575 bits (1483), Expect = 4.19e-205
Identity = 290/343 (84.55%), Postives = 309/343 (90.09%), Query Frame = 0


Query: 1   MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLAL 60
           MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLN LLTCKRLNRL L
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAV+ E WC+SAHRFLKRCV+AGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDF 240
           DGYGVRRNTDEGRRLLIQANAREL++VL+SSSRV QQRHH  G L DLTA T C LLSDF
Sbjct: 181 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTA-TRCSLLSDF 240

Query: 241 GCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN 300
           GC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRP EFRRCS+CGTVN
Sbjct: 241 GCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVN 300

Query: 301 YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEE 340
           YCSRGCQAQDWK+RHK  C  +++W++ E +N  GG+F  VEE
Sbjct: 301 YCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEE 342

[Close]

BLAST of MC06g0054 vs. NCBI nr
Match: KAG7023063.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 575 bits (1483), Expect = 4.19e-205
Identity = 289/343 (84.26%), Postives = 310/343 (90.38%), Query Frame = 0


Query: 1   MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLAL 60
           MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLNLLLTCKRLNRL L
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAV+ E WC+SAHRFLKRCV+AGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKNDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDF 240
           DGYGVRRN+DEGRRLLIQANAREL++VL+SSSRV QQRHH  G L DLTA T C LLSDF
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTA-TRCSLLSDF 240

Query: 241 GCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN 300
           GC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRP EFRRCS+CGTVN
Sbjct: 241 GCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVN 300

Query: 301 YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEE 340
           YCSRGCQAQDWK+RHK  C  +++W++ E +N  GG+F  VEE
Sbjct: 301 YCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEE 342

[Close]

BLAST of MC06g0054 vs. NCBI nr
Match: KAG6589385.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 575 bits (1483), Expect = 5.76e-204
Identity = 289/343 (84.26%), Postives = 310/343 (90.38%), Query Frame = 0


Query: 1   MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLAL 60
           MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLNLLLTCKRLNRL L
Sbjct: 73  MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 132

Query: 61  HPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAV+ E WC+SAHRFLKRCV+AGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 133 HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 192

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 193 MAKAAIKSHAPALYSLAVIQFNGSGGSKNDKDLQAGVALCARAAFLGHVDALRELGHCLQ 252

Query: 181 DGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDF 240
           DGYGVRRN+DEGRRLLIQANAREL++VL+SSSRV QQRHH  G L DLTA T C LLSDF
Sbjct: 253 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTA-TRCSLLSDF 312

Query: 241 GCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN 300
           GC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRP EFRRCS+CGTVN
Sbjct: 313 GCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVN 372

Query: 301 YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEE 340
           YCSRGCQAQDWK+RHK  C  +++W++ E +N  GG+F  VEE
Sbjct: 373 YCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEE 414

[Close]

BLAST of MC06g0054 vs. NCBI nr
Match: XP_022987090.1 (F-box protein At1g67340-like [Cucurbita maxima])

HSP 1 Score: 565 bits (1455), Expect = 7.69e-201
Identity = 284/343 (82.80%), Postives = 305/343 (88.92%), Query Frame = 0


Query: 1   MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLAL 60
           M  +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLNLLLTCKRLNRL L
Sbjct: 1   MSSAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAV+ E WC+SAHRFLKRC +AGNSEASYTLGMIRFYCL NRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCADAGNSEASYTLGMIRFYCLTNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDF 240
           DGYGVRRN+DEGRRLLIQANAREL++VL+SSSRV QQRHH  G L DLTA T C LLSDF
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTA-TRCSLLSDF 240

Query: 241 GCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN 300
           GC+ PA EPHPVNLFLREWFE+ER    R GLRLCSH GCGRPETRP EFRRCS+CGTVN
Sbjct: 241 GCDFPATEPHPVNLFLREWFESERGVAGRVGLRLCSHGGCGRPETRPHEFRRCSICGTVN 300

Query: 301 YCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGV-FAMVEE 340
           YCSRGCQ+QDWK+RHK  C  +++W++   ++ GGV F  VEE
Sbjct: 301 YCSRGCQSQDWKIRHKEECTAVQRWQDAEVDNAGGVMFNAVEE 342

[Close]

BLAST of MC06g0054 vs. ExPASy TrEMBL
Match: A0A6J1E1B7 (F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111429904 PE=4 SV=1)

HSP 1 Score: 575 bits (1483), Expect = 2.03e-205
Identity = 290/343 (84.55%), Postives = 309/343 (90.09%), Query Frame = 0


Query: 1   MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLAL 60
           MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLN LLTCKRLNRL L
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAV+ E WC+SAHRFLKRCV+AGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDF 240
           DGYGVRRNTDEGRRLLIQANAREL++VL+SSSRV QQRHH  G L DLTA T C LLSDF
Sbjct: 181 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTA-TRCSLLSDF 240

Query: 241 GCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN 300
           GC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRP EFRRCS+CGTVN
Sbjct: 241 GCDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVN 300

Query: 301 YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEE 340
           YCSRGCQAQDWK+RHK  C  +++W++ E +N  GG+F  VEE
Sbjct: 301 YCSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEE 342

[Close]

BLAST of MC06g0054 vs. ExPASy TrEMBL
Match: A0A6J1JFU9 (F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111484746 PE=4 SV=1)

HSP 1 Score: 565 bits (1455), Expect = 3.72e-201
Identity = 284/343 (82.80%), Postives = 305/343 (88.92%), Query Frame = 0


Query: 1   MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLAL 60
           M  +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLNLLLTCKRLNRL L
Sbjct: 1   MSSAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAV+ E WC+SAHRFLKRC +AGNSEASYTLGMIRFYCL NRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCADAGNSEASYTLGMIRFYCLTNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDF 240
           DGYGVRRN+DEGRRLLIQANAREL++VL+SSSRV QQRHH  G L DLTA T C LLSDF
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTA-TRCSLLSDF 240

Query: 241 GCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN 300
           GC+ PA EPHPVNLFLREWFE+ER    R GLRLCSH GCGRPETRP EFRRCS+CGTVN
Sbjct: 241 GCDFPATEPHPVNLFLREWFESERGVAGRVGLRLCSHGGCGRPETRPHEFRRCSICGTVN 300

Query: 301 YCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGV-FAMVEE 340
           YCSRGCQ+QDWK+RHK  C  +++W++   ++ GGV F  VEE
Sbjct: 301 YCSRGCQSQDWKIRHKEECTAVQRWQDAEVDNAGGVMFNAVEE 342

[Close]

BLAST of MC06g0054 vs. ExPASy TrEMBL
Match: A0A5D3BGS7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00550 PE=4 SV=1)

HSP 1 Score: 564 bits (1453), Expect = 7.79e-201
Identity = 281/343 (81.92%), Postives = 306/343 (89.21%), Query Frame = 0


Query: 1   MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLAL 60
           MI  KRPRT R   ADSDLFDVLPDDLLIHLL  LA+SASSPSDLLNLLLTCKRLNRL L
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAV+ +NWC+S+HRFLKRCV+AGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSD 240
           DGYGVR+N+DEGRRLL+QANAREL++VL+SSS + QQ+ H   G L DLTA T C LLSD
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTA-TRCSLLSD 240

Query: 241 FGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTV 300
           FGCN+PAPEPHPVNLFLREWFE+E    AR GLRLCSH+GCGR ETRP EFRRCSVCGTV
Sbjct: 241 FGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTV 300

Query: 301 NYCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGVFAMVEE 340
           NYCSRGCQAQDWK+RHK  C  +++WR+E  N+ G +F +VEE
Sbjct: 301 NYCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEE 342

[Close]

BLAST of MC06g0054 vs. ExPASy TrEMBL
Match: A0A1S3CLL0 (F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103502322 PE=4 SV=1)

HSP 1 Score: 564 bits (1453), Expect = 7.79e-201
Identity = 281/343 (81.92%), Postives = 306/343 (89.21%), Query Frame = 0


Query: 1   MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLAL 60
           MI  KRPRT R   ADSDLFDVLPDDLLIHLL  LA+SASSPSDLLNLLLTCKRLNRL L
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAV+ +NWC+S+HRFLKRCV+AGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSD 240
           DGYGVR+N+DEGRRLL+QANAREL++VL+SSS + QQ+ H   G L DLTA T C LLSD
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTA-TRCSLLSD 240

Query: 241 FGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTV 300
           FGCN+PAPEPHPVNLFLREWFE+E    AR GLRLCSH+GCGR ETRP EFRRCSVCGTV
Sbjct: 241 FGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTV 300

Query: 301 NYCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGVFAMVEE 340
           NYCSRGCQAQDWK+RHK  C  +++WR+E  N+ G +F +VEE
Sbjct: 301 NYCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEE 342

[Close]

BLAST of MC06g0054 vs. ExPASy TrEMBL
Match: A0A5A7UPI5 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00550 PE=4 SV=1)

HSP 1 Score: 563 bits (1451), Expect = 1.57e-200
Identity = 281/343 (81.92%), Postives = 306/343 (89.21%), Query Frame = 0


Query: 1   MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLAL 60
           MI  KRPRT R   ADSDLFDVLPDDLLIHLL RLA+SASSPSDLLNLLLTCKRLNRL L
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCRLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKAFAV+ +NWC+S+HRFLKRCV+AGNSEASYTLGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSD 240
           DGYGVR+N+DEGRRLL+QANAREL++VL+SSS + QQ+ H   G L DLTA T C LLSD
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTA-TRCSLLSD 240

Query: 241 FGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTV 300
           FGCN+PAPEPHPVNLFLREWFE+E    AR GLRLCSH+GCGR ETRP EFRRCSVCGTV
Sbjct: 241 FGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTV 300

Query: 301 NYCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGVFAMVEE 340
           NYCSRGCQAQDWK+RHK  C  +++WR+E  N+   +F +VEE
Sbjct: 301 NYCSRGCQAQDWKVRHKEECTTVQRWRDEDANNADEMFDIVEE 342

[Close]

BLAST of MC06g0054 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 438.3 bits (1126), Expect = 5.5e-123
Identity = 212/323 (65.63%), Postives = 250/323 (77.40%), Query Frame = 0


Query: 17  SDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVK 76
           +DL D +PDDL+I +L +L S++  P+D +N+LLTCKRL  LA++P+VLS+  PKA AVK
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 77  TENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSL 136
             NW E +HRFLKRCV+AG+ EA YTLGMIRFYCL+NRG+GASLMAKAAI SHAPALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 137 AVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLL 196
           AVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQDGYGV +N  EGRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 197 IQANARELSSVLIS-----SSRVCQQRHHGGLLDLTASTSCLLLSDFGCNIPAPEPHPVN 256
           +QANAREL++VL S     S+ +   +    ++      +C LLSDFGCN+PAPE HP N
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 257 LFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKL 316
            FL +WF          GLRLCSHAGCGRPETR  EFRRCSVCG VNYCSR CQA DWKL
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 317 RHKVGCRPIEQWRNEAENDPGGV 335
           RHK+ C P+++W  E +   G V
Sbjct: 341 RHKMDCAPVQRWLEEGDGGEGNV 363

[Close]

BLAST of MC06g0054 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 402.5 bits (1033), Expect = 3.3e-112
Identity = 202/304 (66.45%), Postives = 236/304 (77.63%), Query Frame = 0


Query: 20  FDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTEN 79
           F+ L DDL+I +LR+LA+SASSPSD L +L TCKRLNRL LHPLVLSKAG +  AV  E 
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 80  WCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVI 139
           W +S+H+FLK CV AGN +ASY+LGMIRFYCL+N  SGASLMAKAAIKSHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 140 QFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQA 199
           QFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV R+  EGRRLLIQA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 200 NARELSSVLISSSRVCQQRHHGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFE 259
           NAREL+  L S   +     +  L DL+              +P  E HPVN FL+EWF 
Sbjct: 202 NARELACSLRSYLSLKSGDENETLTDLSV-------------VPVQEIHPVNRFLKEWFS 261

Query: 260 TERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCRP 319
           + R  +A +GLR+CSH GCGRPETR  EFRRCSVCG VNYCSRGCQA DW+ +HKV C P
Sbjct: 262 SGRVDLA-EGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVECTP 311

Query: 320 IEQW 324
           ++ W
Sbjct: 322 LDLW 311

[Close]

BLAST of MC06g0054 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 45.1 bits (105), Expect = 1.3e-04
Identity = 18/41 (43.90%), Postives = 24/41 (58.54%), Query Frame = 0


Query: 278 CGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCR 319
           CG+  T     ++CS C +V YCS  CQ  DWK  HK+ C+
Sbjct: 67  CGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKCK 102

[Close]

BLAST of MC06g0054 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 42.7 bits (99), Expect = 6.7e-04
Identity = 17/39 (43.59%), Postives = 23/39 (58.97%), Query Frame = 0


Query: 290 RCSVCGTVNYCSRGCQAQDWKLRHKVGCRPIEQWRNEAE 329
           RCS C +V YCS  CQ   W++ HK  C P+E   + +E
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVESCSSSSE 178

[Close]

BLAST of MC06g0054 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 42.7 bits (99), Expect = 6.7e-04
Identity = 17/39 (43.59%), Postives = 23/39 (58.97%), Query Frame = 0


Query: 290 RCSVCGTVNYCSRGCQAQDWKLRHKVGCRPIEQWRNEAE 329
           RCS C +V YCS  CQ   W++ HK  C P+E   + +E
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVESCSSSSE 178

The following BLAST results are available for this feature:

BLAST of MC06g0054 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	7.7e-122	65.63	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	4.7e-111	66.45	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q03162	2.0e-05	34.85	MYND-type zinc finger protein MUB1 OS=Saccharomyces cerevisiae (strain ATCC 2045...	[more]
Q09415	5.9e-05	45.28	SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=...	[more]

BLAST of MC06g0054 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516460.1	7.25e-206	84.55	F-box protein At1g67340-like [Cucurbita pepo subsp. pepo]	[more]
XP_022921747.1	4.19e-205	84.55	F-box protein At1g67340-like [Cucurbita moschata]	[more]
KAG7023063.1	4.19e-205	84.26	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589385.1	5.76e-204	84.26	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022987090.1	7.69e-201	82.80	F-box protein At1g67340-like [Cucurbita maxima]	[more]

BLAST of MC06g0054 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1B7	2.03e-205	84.55	F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111429904 PE=4 ...	[more]
A0A6J1JFU9	3.72e-201	82.80	F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111484746 PE=4 SV...	[more]
A0A5D3BGS7	7.79e-201	81.92	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00550 ...	[more]
A0A1S3CLL0	7.79e-201	81.92	F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103502322 PE=4 SV=1	[more]
A0A5A7UPI5	1.57e-200	81.92	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00550 ...	[more]

BLAST of MC06g0054 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	5.5e-123	65.63	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	3.3e-112	66.45	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT2G24640.1	1.3e-04	43.90	ubiquitin-specific protease 19	[more]
AT1G17110.1	6.7e-04	43.59	ubiquitin-specific protease 15	[more]
AT1G17110.2	6.7e-04	43.59	ubiquitin-specific protease 15	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 277..317 e-value: 1.3E-7 score: 31.6
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 275..317 score: 10.764384
None	No IPR available	GENE3D	6.10.140.2220		coord: 255..322 e-value: 4.0E-11 score: 44.4
None	No IPR available	PANTHER	PTHR46758:SF9	HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN	coord: 1..330
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 271..323
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 78..200
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 22..62 e-value: 1.8E-5 score: 24.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 23..212 e-value: 3.0E-18 score: 68.3
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 1..330
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 9..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0054.1	MC06g0054.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding