MC05g_new0407 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g_new0407
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Non-specific lipid-transfer protein
Location	MC05: 19705886 .. 19707295 (+)
RNA-Seq Expression	MC05g_new0407
Synteny	MC05g_new0407

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGATGAAATGATAGGAGAGGTTAATTAAAATGGAGAAAGGTTAAGCCTTAAGGTGAATGAATGCGGTGAAAGTAGAAAATGAGTTTGAGTTTTGGGTGCGGTTGAGATTTTGAATCGGTAAATCCAATGAAGTAGAGTAGAGTAGAGCATATGAGAGTAATGGAAAATGGGGCCGGACTCAACTACCAACAACCCCATGGTGATGGTGTGGGTCCGCGTGTAATTTAATGAAATGTGAGGGCCGGGCCGAGCCGGATCCGGAGGACTGAGGAGTGGAGTGGCTATATAAAGAGCAGAACCCACATTGCATCCACATCCAGTTCCATAACTTAAGAGAAGATTTTGAGAAGAGAGGATTTAGATATAATGGAGATGAGCAGGAAGATGATGATTGTGGCGATGGCGATGGTGTTGTTGGTGGTGGGGTCTCCGGTGGCTGATGCGGTTATTTCGTGCGGCGCCGTGAGCAGCGCAATGGCGCCGTGCATCCCATACTTGAGGAACCAAGGGCCTATTGGGGCGGGTTGCTGCAGCGGGGTTAAGGCCCTCAACAGCCAAGCTTCTACCACGGCCGACCGTCAGGCCGCTTGCAAATGCTTGAAGACTGCCGCTGCCGCCATCCCTGGACTGAACTTGGGCCTCGCCGCTGGCCTCCCCTCTCATTGTGGCGTCAACATTCCATACAAGATCAGCCCCAGCACCGACTGCGCCCAAGTTCGCTGAGTACCGCCACCAGTACTCAATAATATAATATTATATATCTACCATTATTAATAAATAAACACAAAAAAAAAAAAAGCATGGGTGCTTTTGCTATGCTTATATGGTGATCCCATTCCCAGGACAGGATCCCATCCTTTTGCTGGTTGATGTTACTTTACTTTCCCAGTTGGTTCGGTCCATGCAGACCAGTCCGGTGTCCTCCACTTTTTAATTTTCGTACGTGTCTTAATGTATTTGAGATTTCCTCTTTCCTCTTCCTCTTTGCTTTGTTCTCTCTGGTCATTGCATGCCTTTTCTTTTTACTAACCACCATAAAAATGGGAAACAATTGAACTAAGTATATATGTTATTCTTTAAAAAGTATGGAGATAGATTTGTAGGAAGTCTAAGTTAGCACGACTTTATTTTTAGTTTCATTAGAAAAAAAAATCTCATACTAATTGAAATATTGTCCCTTATATAATTTTGTTCGTATTTTTAACAAACTCAACAAATCACATCATTTCAAACTGCAATGACAATGGTGACGAGGATGTGAACCAAGTGCCCGCAATGAGCCTGATAGTATGAATTGTATAGTTGAAAAACTAATTTCGTTTATTGTTCTGTCATGTGGTTCAATACAGACTACAGACTGTACTTTGCTCTGGTCTACTACTGTGTCTACTCAATATCATATCATATTAC

mRNA sequence

ATGGAGATGAGCAGGAAGATGATGATTGTGGCGATGGCGATGGTGTTGTTGGTGGTGGGGTCTCCGGTGGCTGATGCGGTTATTTCGTGCGGCGCCGTGAGCAGCGCAATGGCGCCGTGCATCCCATACTTGAGGAACCAAGGGCCTATTGGGGCGGGTTGCTGCAGCGGGGTTAAGGCCCTCAACAGCCAAGCTTCTACCACGGCCGACCGTCAGGCCGCTTGCAAATGCTTGAAGACTGCCGCTGCCGCCATCCCTGGACTGAACTTGGGCCTCGCCGCTGGCCTCCCCTCTCATTGTGGCGTCAACATTCCATACAAGATCAGCCCCAGCACCGACTGCGCCCAAGTTCGCTGA

Coding sequence (CDS)

ATGGAGATGAGCAGGAAGATGATGATTGTGGCGATGGCGATGGTGTTGTTGGTGGTGGGGTCTCCGGTGGCTGATGCGGTTATTTCGTGCGGCGCCGTGAGCAGCGCAATGGCGCCGTGCATCCCATACTTGAGGAACCAAGGGCCTATTGGGGCGGGTTGCTGCAGCGGGGTTAAGGCCCTCAACAGCCAAGCTTCTACCACGGCCGACCGTCAGGCCGCTTGCAAATGCTTGAAGACTGCCGCTGCCGCCATCCCTGGACTGAACTTGGGCCTCGCCGCTGGCCTCCCCTCTCATTGTGGCGTCAACATTCCATACAAGATCAGCCCCAGCACCGACTGCGCCCAAGTTCGCTGA

Protein sequence

MEMSRKMMIVAMAMVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR

Homology

[Close]

BLAST of MC05g_new0407 vs. ExPASy Swiss-Prot
Match: Q42952 (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum OX=4097 GN=LTP1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.3e-30
Identity = 72/118 (61.02%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 1   MEMSRKMMIVAMAMVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKA 60
           ME++ K  I    ++ +VV +P A+A I+CG V+S +APC+ YLRN GP+G  CC GVKA
Sbjct: 1   MEIAGK--IACFVVLCMVVAAPCAEA-ITCGQVTSNLAPCLAYLRNTGPLGR-CCGGVKA 60

Query: 61  LNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 119
           L + A TT DRQ AC CLK+AA AI G+NLG AAGLPS CGVNIPYKISPSTDC++V+
Sbjct: 61  LVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ 114

[Close]

BLAST of MC05g_new0407 vs. ExPASy Swiss-Prot
Match: O24038 (Non-specific lipid-transfer protein 2 OS=Solanum pennellii OX=28526 GN=LTP2 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.5e-29
Identity = 69/118 (58.47%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 1   MEMSRKMMIVAMAMVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKA 60
           MEM  K  I    ++ +VV +P A+A ++CG V+S +APC+PYL N+GP+G GCC GVK 
Sbjct: 1   MEMVNK--IACFVLLCMVVVAPHAEA-LTCGQVTSTLAPCLPYLMNRGPLG-GCCGGVKG 60

Query: 61  LNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 119
           L  QA TT DRQ AC CLK+AA++  GL+LG AA LPS C VNIPYKISPSTDC++V+
Sbjct: 61  LLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKVQ 114

[Close]

BLAST of MC05g_new0407 vs. ExPASy Swiss-Prot
Match: Q3YMR2 (Non-specific lipid-transfer protein 2 OS=Solanum chilense OX=4083 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.7e-29
Identity = 69/118 (58.47%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 1   MEMSRKMMIVAMAMVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKA 60
           MEM  K  I    ++ +VV +P A+A ++CG V+S +APC+PYL N+GP+G GCC GVK 
Sbjct: 1   MEMVNK--IACFVLLCMVVVAPHAEA-LTCGQVTSTLAPCLPYLMNRGPLG-GCCGGVKG 60

Query: 61  LNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 119
           L  QA TT DRQAAC CLK+AA++   L+LG AA LPS C VNIPYKISPSTDC++V+
Sbjct: 61  LLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKVQ 114

[Close]

BLAST of MC05g_new0407 vs. ExPASy Swiss-Prot
Match: Q43129 (Non-specific lipid-transfer protein OS=Gossypium hirsutum OX=3635 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-28
Identity = 63/120 (52.50%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 1   MEMSRKMMIVAMAMVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQ--GPIGAGCCSGV 60
           M  S  + +  + ++ +VVG+P+A   ++ G V++++APCI YLR    G +  GCC+G+
Sbjct: 1   MASSMSLKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGI 60

Query: 61  KALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 119
           K+LNS A TT  RQAAC+C+K+AAA I G+N GLA+GLP  CGVNIPYKISPSTDC  V+
Sbjct: 61  KSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120

[Close]

BLAST of MC05g_new0407 vs. ExPASy Swiss-Prot
Match: P85894 (Non-specific lipid-transfer protein 1 OS=Morus nigra OX=85232 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.9e-28
Identity = 60/91 (65.93%), Postives = 73/91 (80.22%), Query Frame = 0


Query: 28  ISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPG 87
           I+CG VSS++APCI YLR  G + A CC+GV++LN+ A TTADRQAAC CLK+A  +I G
Sbjct: 1   ITCGQVSSSLAPCINYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKG 60

Query: 88  LNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 119
           LNL LAAGLP  CGV++PYKISPSTDC  V+
Sbjct: 61  LNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91

[Close]

BLAST of MC05g_new0407 vs. NCBI nr
Match: XP_022157263.1 (non-specific lipid-transfer protein 1-like [Momordica charantia])

HSP 1 Score: 225 bits (573), Expect = 6.55e-74
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MEMSRKMMIVAMAMVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKA 60
           MEMSRKMMIVAMAMVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKA
Sbjct: 1   MEMSRKMMIVAMAMVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKA 60

Query: 61  LNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 118
           LNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR
Sbjct: 61  LNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 118

[Close]

BLAST of MC05g_new0407 vs. NCBI nr
Match: XP_022157264.1 (non-specific lipid-transfer protein 1-like [Momordica charantia])

HSP 1 Score: 144 bits (364), Expect = 4.27e-42
Identity = 80/119 (67.23%), Postives = 94/119 (78.99%), Query Frame = 0


Query: 1   MEMSRKMMIVA-MAMVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVK 60
           MEMSRKMMIVA M M+ +VVG     A ISCG+V+ A+APCI YLR  G +   CCSGVK
Sbjct: 1   MEMSRKMMIVAGMVMMWMVVGG----AAISCGSVNGAVAPCISYLRPGGVLSPACCSGVK 60

Query: 61  ALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 118
            LNSQASTTADRQA C+CLK+AA AI G++LG AAGLP  CGV++PYKISPSTDC++V 
Sbjct: 61  NLNSQASTTADRQAVCQCLKSAAGAIQGIDLGRAAGLPGKCGVSVPYKISPSTDCSKVH 115

[Close]

BLAST of MC05g_new0407 vs. NCBI nr
Match: AFR43276.1 (lipid transfer protein precursor [Gossypium herbaceum subsp. africanum] >AFR43278.1 lipid transfer protein precursor [Gossypium barbadense] >TYG99239.1 hypothetical protein ES288_A10G180600v1 [Gossypium darwinii] >TYI06731.1 hypothetical protein ES332_A10G179800v1 [Gossypium tomentosum] >KAB2062575.1 hypothetical protein ES319_A10G161900v1 [Gossypium barbadense])

HSP 1 Score: 140 bits (354), Expect = 1.66e-40
Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 17  LVVGSPVADAVISCGAVSSAMAPCIPYLRNQGP--IGAGCCSGVKALNSQASTTADRQAA 76
           +VVG+P+A   ++CG V+S++APCI YLR  G   I  GCCSG+K+LNS A TT DRQAA
Sbjct: 17  MVVGAPLAQGAVTCGQVTSSLAPCINYLRGTGAGAIPPGCCSGIKSLNSAAQTTPDRQAA 76

Query: 77  CKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 118
           CKC+K+AAA IPG+N GLA+GLP  CGVNIPYKISPSTDC+ V+
Sbjct: 77  CKCIKSAAAGIPGINFGLASGLPGKCGVNIPYKISPSTDCSSVK 120

[Close]

BLAST of MC05g_new0407 vs. NCBI nr
Match: XP_016677580.2 (non-specific lipid-transfer protein-like isoform X2 [Gossypium hirsutum] >AAF35186.1 lipid transfer protein precursor [Gossypium hirsutum] >ACI26698.1 lipid transfer protein [Gossypium hirsutum] >AFR43277.1 lipid transfer protein precursor [Gossypium hirsutum] >KAG4180172.1 hypothetical protein ERO13_A10G150100v2 [Gossypium hirsutum])

HSP 1 Score: 140 bits (354), Expect = 1.66e-40
Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 17  LVVGSPVADAVISCGAVSSAMAPCIPYLRNQGP--IGAGCCSGVKALNSQASTTADRQAA 76
           +VVG+P+A   ++CG V+S++APCI YLR  G   I  GCCSG+K+LNS A TT DRQAA
Sbjct: 17  MVVGAPLAQGAVTCGQVTSSLAPCINYLRGTGAGAIPPGCCSGIKSLNSAAQTTPDRQAA 76

Query: 77  CKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 118
           CKC+K+AAA IPG+N GLA+GLP  CGVNIPYKISPSTDC+ V+
Sbjct: 77  CKCIKSAAAGIPGINFGLASGLPGKCGVNIPYKISPSTDCSSVK 120

[Close]

BLAST of MC05g_new0407 vs. NCBI nr
Match: TYJ15160.1 (hypothetical protein E1A91_A10G166300v1 [Gossypium mustelinum])

HSP 1 Score: 139 bits (351), Expect = 4.74e-40
Identity = 67/104 (64.42%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 17  LVVGSPVADAVISCGAVSSAMAPCIPYLRNQGP--IGAGCCSGVKALNSQASTTADRQAA 76
           +VVG+P+A   ++CG V+S++APCI YLR  G   I  GCC+G+K+LNS A TT DRQAA
Sbjct: 17  MVVGAPLAQGAVTCGQVTSSLAPCINYLRGTGAGAIPPGCCNGIKSLNSAAQTTPDRQAA 76

Query: 77  CKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 118
           CKC+K+AAA IPG+N GLA+GLP  CGVNIPYKISPSTDC+ V+
Sbjct: 77  CKCIKSAAAGIPGINFGLASGLPGKCGVNIPYKISPSTDCSSVK 120

[Close]

BLAST of MC05g_new0407 vs. ExPASy TrEMBL
Match: A0A6J1DSX2 (Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC111024013 PE=3 SV=1)

HSP 1 Score: 225 bits (573), Expect = 3.17e-74
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MEMSRKMMIVAMAMVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKA 60
           MEMSRKMMIVAMAMVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKA
Sbjct: 1   MEMSRKMMIVAMAMVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKA 60

Query: 61  LNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 118
           LNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR
Sbjct: 61  LNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 118

[Close]

BLAST of MC05g_new0407 vs. ExPASy TrEMBL
Match: A0A6J1DW01 (Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC111024014 PE=3 SV=1)

HSP 1 Score: 144 bits (364), Expect = 2.07e-42
Identity = 80/119 (67.23%), Postives = 94/119 (78.99%), Query Frame = 0


Query: 1   MEMSRKMMIVA-MAMVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVK 60
           MEMSRKMMIVA M M+ +VVG     A ISCG+V+ A+APCI YLR  G +   CCSGVK
Sbjct: 1   MEMSRKMMIVAGMVMMWMVVGG----AAISCGSVNGAVAPCISYLRPGGVLSPACCSGVK 60

Query: 61  ALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 118
            LNSQASTTADRQA C+CLK+AA AI G++LG AAGLP  CGV++PYKISPSTDC++V 
Sbjct: 61  NLNSQASTTADRQAVCQCLKSAAGAIQGIDLGRAAGLPGKCGVSVPYKISPSTDCSKVH 115

[Close]

BLAST of MC05g_new0407 vs. ExPASy TrEMBL
Match: Q9M6B6 (Non-specific lipid-transfer protein OS=Gossypium hirsutum OX=3635 GN=FSltp3 PE=2 SV=1)

HSP 1 Score: 140 bits (354), Expect = 8.02e-41
Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 17  LVVGSPVADAVISCGAVSSAMAPCIPYLRNQGP--IGAGCCSGVKALNSQASTTADRQAA 76
           +VVG+P+A   ++CG V+S++APCI YLR  G   I  GCCSG+K+LNS A TT DRQAA
Sbjct: 17  MVVGAPLAQGAVTCGQVTSSLAPCINYLRGTGAGAIPPGCCSGIKSLNSAAQTTPDRQAA 76

Query: 77  CKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 118
           CKC+K+AAA IPG+N GLA+GLP  CGVNIPYKISPSTDC+ V+
Sbjct: 77  CKCIKSAAAGIPGINFGLASGLPGKCGVNIPYKISPSTDCSSVK 120

[Close]

BLAST of MC05g_new0407 vs. ExPASy TrEMBL
Match: U5HU82 (Non-specific lipid-transfer protein OS=Gossypium barbadense OX=3634 GN=LTP3 PE=3 SV=1)

HSP 1 Score: 140 bits (354), Expect = 8.02e-41
Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 17  LVVGSPVADAVISCGAVSSAMAPCIPYLRNQGP--IGAGCCSGVKALNSQASTTADRQAA 76
           +VVG+P+A   ++CG V+S++APCI YLR  G   I  GCCSG+K+LNS A TT DRQAA
Sbjct: 17  MVVGAPLAQGAVTCGQVTSSLAPCINYLRGTGAGAIPPGCCSGIKSLNSAAQTTPDRQAA 76

Query: 77  CKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 118
           CKC+K+AAA IPG+N GLA+GLP  CGVNIPYKISPSTDC+ V+
Sbjct: 77  CKCIKSAAAGIPGINFGLASGLPGKCGVNIPYKISPSTDCSSVK 120

[Close]

BLAST of MC05g_new0407 vs. ExPASy TrEMBL
Match: A0A5D2NRE5 (Non-specific lipid-transfer protein OS=Gossypium tomentosum OX=34277 GN=ES332_A10G179800v1 PE=3 SV=1)

HSP 1 Score: 140 bits (354), Expect = 8.02e-41
Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 17  LVVGSPVADAVISCGAVSSAMAPCIPYLRNQGP--IGAGCCSGVKALNSQASTTADRQAA 76
           +VVG+P+A   ++CG V+S++APCI YLR  G   I  GCCSG+K+LNS A TT DRQAA
Sbjct: 17  MVVGAPLAQGAVTCGQVTSSLAPCINYLRGTGAGAIPPGCCSGIKSLNSAAQTTPDRQAA 76

Query: 77  CKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 118
           CKC+K+AAA IPG+N GLA+GLP  CGVNIPYKISPSTDC+ V+
Sbjct: 77  CKCIKSAAAGIPGINFGLASGLPGKCGVNIPYKISPSTDCSSVK 120

[Close]

BLAST of MC05g_new0407 vs. TAIR 10
Match: AT2G38530.1 (lipid transfer protein 2 )

HSP 1 Score: 110.9 bits (276), Expect = 6.9e-25
Identity = 61/118 (51.69%), Postives = 80/118 (67.80%), Query Frame = 0


Query: 3   MSRKMMIVAMAMVLLVVGSPV-ADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKAL 62
           M+  M +  M +  ++V  P+ A+A++SCG V+  +A CI YL    P+  GCC+GV  L
Sbjct: 1   MAGVMKLACMVLACMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQGCCNGVTNL 60

Query: 63  NSQASTTADRQAACKCLKTAAAAI-PGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 119
            + ASTT DRQ AC+CL++AA A+ PGLN   AAGLPS C VNIPYKIS ST+C  VR
Sbjct: 61  KNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118

[Close]

BLAST of MC05g_new0407 vs. TAIR 10
Match: AT2G38540.1 (lipid transfer protein 1 )

HSP 1 Score: 107.5 bits (267), Expect = 7.7e-24
Identity = 60/118 (50.85%), Postives = 79/118 (66.95%), Query Frame = 0


Query: 3   MSRKMMIVAMAMVLLVVGSPV-ADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKAL 62
           M+  M +  + +  ++V  P+ ++A +SCG+V+S +A CI Y+   G I   CCSGVK L
Sbjct: 1   MAGVMKLACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNL 60

Query: 63  NSQASTTADRQAACKCLKTAAAAI-PGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 119
           NS A TT DRQ AC C++ AA A+  GLN G AAG+P  CGVNIPYKIS ST+C  VR
Sbjct: 61  NSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118

[Close]

BLAST of MC05g_new0407 vs. TAIR 10
Match: AT5G59320.1 (lipid transfer protein 3 )

HSP 1 Score: 107.5 bits (267), Expect = 7.7e-24
Identity = 54/105 (51.43%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 14  MVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQA 73
           +VL V      DA ISCG V+ ++APC  YL   G +   CC+GVK LNS A TT DRQ 
Sbjct: 11  LVLTVCIVASVDAAISCGTVAGSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTTPDRQQ 70

Query: 74  ACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 119
           AC+C+++ A +I GLN  LA+GLP  CGV+IPY IS ST+C  ++
Sbjct: 71  ACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115

[Close]

BLAST of MC05g_new0407 vs. TAIR 10
Match: AT5G59310.1 (lipid transfer protein 4 )

HSP 1 Score: 101.7 bits (252), Expect = 4.2e-22
Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 15  VLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAA 74
           VL V      DA I+CG V+S+++PC+ YL   G +   CC+GVK LN  A TT DRQ A
Sbjct: 12  VLTVFIVASVDAAITCGTVASSLSPCLGYLSKGGVVPPPCCAGVKKLNGMAQTTPDRQQA 71

Query: 75  CKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR 119
           C+CL++AA    G+N  LA+GLP  CGV+IPY IS ST+CA ++
Sbjct: 72  CRCLQSAA---KGVNPSLASGLPGKCGVSIPYPISTSTNCATIK 112

[Close]

BLAST of MC05g_new0407 vs. TAIR 10
Match: AT3G51590.1 (lipid transfer protein 12 )

HSP 1 Score: 97.1 bits (240), Expect = 1.0e-20
Identity = 50/109 (45.87%), Postives = 68/109 (62.39%), Query Frame = 0


Query: 9   IVAMAMVLLVVGSPVADAVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTT 68
           I+   +VL +  +   ++ I CG V+S +A C+ YL N GP+ + CC GVK+L   A TT
Sbjct: 7   IITCLIVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLAQTT 66

Query: 69  ADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQV 118
            DR+  C+CLK A   I GLN  L A LP+ CGV+IPY IS ST+C  +
Sbjct: 67  PDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115

The following BLAST results are available for this feature:

BLAST of MC05g_new0407 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42952	5.3e-30	61.02	Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum OX=4097 GN=LTP1 PE=1 ...	[more]
O24038	3.5e-29	58.47	Non-specific lipid-transfer protein 2 OS=Solanum pennellii OX=28526 GN=LTP2 PE=3...	[more]
Q3YMR2	7.7e-29	58.47	Non-specific lipid-transfer protein 2 OS=Solanum chilense OX=4083 PE=3 SV=1	[more]
Q43129	1.3e-28	52.50	Non-specific lipid-transfer protein OS=Gossypium hirsutum OX=3635 PE=2 SV=1	[more]
P85894	2.9e-28	65.93	Non-specific lipid-transfer protein 1 OS=Morus nigra OX=85232 PE=1 SV=1	[more]

BLAST of MC05g_new0407 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157263.1	6.55e-74	100.00	non-specific lipid-transfer protein 1-like [Momordica charantia]	[more]
XP_022157264.1	4.27e-42	67.23	non-specific lipid-transfer protein 1-like [Momordica charantia]	[more]
AFR43276.1	1.66e-40	65.38	lipid transfer protein precursor [Gossypium herbaceum subsp. africanum] >AFR4327...	[more]
XP_016677580.2	1.66e-40	65.38	non-specific lipid-transfer protein-like isoform X2 [Gossypium hirsutum] >AAF351...	[more]
TYJ15160.1	4.74e-40	64.42	hypothetical protein E1A91_A10G166300v1 [Gossypium mustelinum]	[more]

BLAST of MC05g_new0407 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSX2	3.17e-74	100.00	Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC1110240...	[more]
A0A6J1DW01	2.07e-42	67.23	Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC1110240...	[more]
Q9M6B6	8.02e-41	65.38	Non-specific lipid-transfer protein OS=Gossypium hirsutum OX=3635 GN=FSltp3 PE=2...	[more]
U5HU82	8.02e-41	65.38	Non-specific lipid-transfer protein OS=Gossypium barbadense OX=3634 GN=LTP3 PE=3...	[more]
A0A5D2NRE5	8.02e-41	65.38	Non-specific lipid-transfer protein OS=Gossypium tomentosum OX=34277 GN=ES332_A1...	[more]

BLAST of MC05g_new0407 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38530.1	6.9e-25	51.69	lipid transfer protein 2	[more]
AT2G38540.1	7.7e-24	50.85	lipid transfer protein 1	[more]
AT5G59320.1	7.7e-24	51.43	lipid transfer protein 3	[more]
AT5G59310.1	4.2e-22	50.96	lipid transfer protein 4	[more]
AT3G51590.1	1.0e-20	45.87	lipid transfer protein 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 70..85 score: 59.42 coord: 29..45 score: 54.84 coord: 105..116 score: 57.82 coord: 87..104 score: 56.75 coord: 49..63 score: 47.18
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 7..116
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PROSITE	PS00597	PLANT_LTP	coord: 96..117
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 30..114 e-value: 4.0E-15 score: 66.2
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 30..114 e-value: 2.6E-8 score: 34.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 27..118 e-value: 5.6E-31 score: 108.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 28..117
None	No IPR available	PANTHER	PTHR33076:SF95	NON-SPECIFIC LIPID-TRANSFER PROTEIN	coord: 7..116
None	No IPR available	CDD	cd01960	nsLTP1	coord: 28..114 e-value: 6.33734E-40 score: 126.31

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g_new0407.1	MC05g_new0407.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044403	biological process involved in symbiotic interaction
biological_process	GO:0010143	cutin biosynthetic process
biological_process	GO:0006869	lipid transport
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0090379	secondary cell wall biogenesis involved in seed trichome differentiation
biological_process	GO:0090378	seed trichome elongation
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0008134	transcription factor binding