MC05g_new0277 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g_new0277
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTy3/gypsy retrotransposon protein
LocationMC05: 13983401 .. 13989635 (-)
RNA-Seq ExpressionMC05g_new0277
SyntenyMC05g_new0277
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGTATCAATATCTCGATCAAGGAGGTCATTTATGGTACACCCAGCACCCCTCAAAAGCAAAGCCCCACATCCAAATAGAGTCAGCATTTTAAAATCAGGTAAATGGCCTGGAGATGCCGCCAAGGTAATTGACCTAAAGAATACAATTTTACTCTAGTTATGAATTTCGGAAAATATGCACTCCCTAAAATATATGATCCAGTCAAGAGTGCAAATGAGAGGGTAATAAAAATAAACCAGTGATAGACACTTGTCTATTTTAAGTTGTAACAGGAAACACATCCCGACTAGAACACATGATTTCATAAAAATCCCTAGTTACTTCACAAACAATCAAGTTTGAAATAATACACATGATATGAAGAACATGGAGATTATTTTAATAAATGACTATGGAGATTTTAACTAAATTATGCACGCCTCAACTAACCTCTCATTAATACCAGACTTAGGATCAAATATGAAACGTATCACTCCTTATCTTGATGATTATCACGACTTTAACCACTTTACATTGTTTTGTATCACGTCCTTTTTACAACTAGACAAGTAATAGTGATTGGTATGATACAAATATTACTAATTCCACAACCCAGCCGAATATTGAATATAAGAATTAATACCGCTGGTCAATTAACAATTATATAAAACATCCAAAAGTTTCTTATATACCATGACATTCACAAATACTCCAACAGAGACCAAAAATCAAAAGTAGCTCTTACCACATACAAGGCAAAGCAAGTAACCACATCCCAATGGGTTTATCTAGCCGCGCTAGGTGAGCATAGGGCTGAGCCTTTTTGGGCAAATACAAAGAAATCCAGGACATCTCAACTTTCCCTTGAGTTTTTCCGTCATTTGTAACACTACCATGCGGGTTGGAACTGTCCTTTAAATTCAAAGACGTAGATAAACCACGTATGAATCCGAATCTAAAATCACGAATTAAATTTTCGCGAGCAAAATCCAATTGAGTACACCATAAATTGGAAACTAAACTAGCTCTGGAGTAAGAAATTGGCGCGTCGAGATTGGAGAAGAGGTTGAGGAATTCACGATGAAGAAAGAGAGAGGACAGAGACCTGAGCGAAGTACGGGATAGCAAAGACGCCATTCCCTATCCATAAACAAGCAAATAGAACATATTTATTTTTTTCTTTTTTTTGTAGAGAAACAATTTCATCATGCTATAAGAGTAAAAGAGAGGAGAAGCTTTAAATCAAGATATAGCAAGAAATATGATATTGTCAAAGAGTCCAGTGAAAATGAATTCTTTTTCTGTGAAGAGTCTATGGTTTCTTTCATTCCAAAATGTCCAAAAAAAGCTTGAAGGATGTGTTTCCAGATGATTTTTTTTTTTTTTTTTGATAATAAACAAAGAGATTTCATTCAAAAAGAAGGAGTCCAAAGAAAAGGCAAGAAATACAGCCTAGAGGAAGAGGATCGAGAGGACCCTCTCCAAAGAGACTAAGCAATCAAGGAATTCCAACTCTAAAGAGTCAAAAGAAAGTGTTTCCAGATGATCGCATTCTCTTTCTTGAAAGGATGGCCCACAATAACATATGTGAGTAAAAAATGACCCACAAGAACATATGTGAGTAGCTCCTTGATATTGTAGGTAGACCCACTTTCCAATCGAAAGCTAGAAGAATCTCGTTCCAAAACAGCATTGCAAGGGGGCATGTGAGGAAGAGGTGAGGCTGTGACTCTCTATCTCTTTTACAAAGTATGCACCAATGGGGGAGAAATGGCAATAAAGGGGAGCTTTAATCTATCGTGGGAGTTGATGGCCTTGTGAGTAAGTTCCCATATGAAGAATTTAATCTTTTTTTGGGTAGATTTCACCCCATATAGCTTTAGCAAGAAGGGAAGGGATGAGGTATTCCTTTGAGACCATGTCAGTGAGGAAAGACTTGGTGGAGTAGAACCCCTTGCTGTCTAGAGGCCAAAACCATGCAGCCAAACTTGAGATGTCTAAACCCAAGTCCCAAAAGCCAAGTTCATTGTTCCATAATTCCTTCACAGATGCTGTTTTTTTAACGGAACAGAGTAAAGTTGAGGGAAGATTGTTGCCAAGGGGGAACCATGCAGCCAAGCATCAGACCAAAAAGATGTAGAAGCCCCATTTCTAACTTGTGATTTGTGAAGTTGTACGATCATGGATGAGATGCCGGTGCTTATAAATATTCTTCCATGGGCCACGTGCATATTTTATGGATTTGGAACCAGGTTTGGTATTAAAGGATTTAGAAGTATATTTGGCCTTAATAACTCATCTCCAAAGAGCTGATTTTTTCCCACAATATCACCAAATCCATTTTACAAGTAAAGATCTATTGTTCTCGCATCCCATGAAGACCGAGACCACCTGTTAGACCCCCAATTGTGAAAACTTATAGTAGGAAGGGTAAAGAAGTAATTGAAGAGCGGTTGGGCCATAACGGCCAAGAGAGAGAAGGTACTAGCTATGAGTAGGGAGAGCGAGAAGGCCTATAAGGGGAGGGCATGTTGTTAGGAGAGGATCATTCTGGTTTTCTGTGCTTTTGCTAGCTTAGTAGCTGTTTTAGGAGAGATTCCCCACCCTTTCGAATTGGTGGGTTGGCTTTTGTATTGCCTTCGGGCCTTATCTTTTGAATAAAGAAATCTTGTGGGGAGAAACCTCACAACTTGGTATTAGAGCGATTTCAACTTGGGGAAACACCGAAACATGACGCAGAAGGAGTTGGAGAAGCGGTGTGAGGCTACCGAGAAGGATGTTGCTGGATTGAAAGATACGATTTCAGAGCTCAATTAGAAATCTGATGAGTAGCAGAAGAAGACGGATAAGTTGCAGCAGACCTTGGAGGTGTTCATAATGGAAGTCACCGGGGGAAATCGAATGTTGTTGTCGTCCTCATCGATCGTCGGTGAGTTATCAATACAGAAGGGAAAGGCTCCGATGGGAGAAACACCTGAAAACTATCCTGGCAACCAAGGGAACGATTGGAATCGTTTCAAGAAGGTGGAGACGCCGATCTTCACGGGAACTGATTTGAAGTCGTGGATCTTCCGCGCTGAACGGTATTATGAGATTCAGAAACTGACAGAGGAAGAGAAGATAGTAGCCATGATCAGTTTCGACGGAATCGCCTTGGCGTGGTACCAGTATAAGGACAACCGGGAGAAGTACAAGGACTGGAACGACCTCCAAAGTCGACTGCGGGACCGATTTCACAGGCAATGTGCCCGATTACTTTCGATCAAACAGGAGGGAACCTTCGCCGAATATCGGCAGACGTTTGAGGCGCTGGCGGCGGCCCTACCGCAACTTTCCGATGAAGTTCTAGAGAGCGAATTTCTGAATGGGCTCAATTTTGTAGTCTGCGCCGAAGTCCTTGCAATGGAGCCCAAGGGACTATACCGGATCATTAGGAAGGCCCAGCTTCATAGATGATATCAATACCGCAATACAAAAAGCGGAGGGACAGATGGGGGTAGAGAAGCCCAACTCAGGTCCATCTTCAAGCAAAACCGCTTCAAAAACCCAAGAGGTAATACCTACTCGTACTGTTACCCTTTCGAAAAAAGCCCCCATGTCTGTGCAGGGATCTGAAACGTCACAGGCTACTAAGAAGGAGACGCCCTTTAAGAAGTTAACGAAGGCAGAATACTAGAAGAGGAAGGCGCGGGGACTGTGTTTTCGCTGTGAAGAAAAGTATACCGTCAACCATAAGTGCAGAAATCGTGAGCTCCAAGTGTTTCTAGTCCACGACGACGAGCTATTAGAAGTGGAGGAAGAAAACATGCATGATGCGGAGATCGAGGCTAGGGCTGACAACGATGGGAAAATGGTTGAGTGTCAACTGAACACAATCGTCGGAATCTCAACACCGGGAACCATCAAGGTGAAAGGGTCGATACAGGGAAGAGATGTTGGGTTCTGATCGACTGTGGAGCAACCCACAACTTCATCTCGCTGACCCTAGCGGATGAGTTAAAGTTGCCGAAAACAGAGACAGTGAACTACGGAGTGATCATGGGTTCTGGAACCACTGTCAAAGGGAATGGGATTTGTTGAGGAGTCGTTCTCTCCTTACCGGAACTCACAATGAAGGATGACTTCCTTCTGCTGGACCTAGGGACACTAGATGTCATATTGGGGATGCAATGGCTCCAAACGATGGGCAAGATGGAGGCTGACTGGCCAGTTTTGATGCTGAAATTTGATAAAGGGGGAAAGCAAATCATGATAAGAGGCAACCCCATCCTGGCTCGTTTGGAAGTATCAATGAAGCATCCAGCCAAACAGTGGGAGGCCCAGGCCCAAGGTTATTTGGTCGAGTTGCAGACTCTAAATACACAGATGGAGGAAGCCGAAGTCATTCCTGATAGCCCTTTGCCCTTAGTGGAAAATATGATTCATGAATACTTGGACCTGTTTCAGAAACCTGAAGAACTGCCCCCGAACAGAGCTGTCGATCACCGGATCCCATTGAAGGAAGGCCAACCGCCAGTGAACGTACGGCCATACTGATATGCACATGCCTAGAAAGGGGAAATTGAGAGTTTAATAAACGAGATGTTGGAGGCTAGGATCATCAAGCCAAGTGTAAGTCCCTTTTCAAGTCCAGTGATCTTAGTTAAAAAAGAGGATGGTAGCTGACGATTTTGTGTTGACTATAGGGCTCTCAATAACATCACGGTCCCAGATAAGTTTCCCATACCAGTGGTGGAGGAACTACTTGATGAATTGCACGGATCTAGGGTGTATTCGAAGATTGACTTGAGATCGAGCTACCATCAAATCCGTATGGCAGTAGAGGATACCCACAAAACAACCTTCAGGACTCGTGAACACTATGAGTTCTTGGTGATGCCCTTCGGTTTGACCAATGCCCCGTCAACCTTTCAGGTGCTAAAGAATAATGTATTTCGTCCATTCCTACAAAGGTGCGTGCTCATCTTCTTTGATGATATTCTGATATATAGCCTTAATCTTCAATCTCACTTGACTCATTTGGCCATGGTGTTCAATATGCTGAGGGACAATAAGATGTTTGTGAACCTAAAGAAGTGCCACTTCGTCGTAGAATGCATAGAATACTTGGGCTATTGGGTGTCGGCTAAGGGTTTGGAAGCAGACTCATCCAAGATAGCAGCCATGATTCAATGGCCAGTGTAAAAGAGCTTCAAGGCTTTCTGGGGTTGACGGGCTATTATCGGAAGTTTGTAGCCAATTATGGCACTATAGCTGCTCCTCTAACACAGTTTCTCAAGAAGGATGGCTTCCAATGGACTGAGCAGACCACAGAGGCCTTTGAAAAGCTAAAAATGGCAATGGAGACATTACCCATTTTGGCGCTACCAGATTTCACCATCCCTTTCATGATTGAAATGGATGCATCAGACACTGGCTTAGGGGCCGTCCTCACCCAGAACCAGCAGCCCATCGCCCATCGCCTACTCCACGGATTCCCTTGATCCATCATCTCCAACAGAGATAAAGTCTTTATCAGCCATTTTTGAATTGAGTTATTCAAGTTGCAGGGCACTACTCCGAAACAAAGTACCACGTACCATCCACAAACGGATGGGCAATCAAAGATCGTCAATCGATGCTTGGAAACATACCTCAGGTGTTTTAACAGTGAGAAGCCCAAACAATGGGGTCACTGGCTACCGTGGGCAGAATACTGGTATAACACCACCTACCACAACTCTCTTGGCTCAACCCCTTTCCAGGCAGTGTACGGACGGGCCCCTCCACCATTGATCCTTTATGGGAGCCAAAGGACCATGAATGCCACCTTCGACCAACAGCCGACAGAGAGGTACTTGGCCTTAGAATGACTGAAGGAACATTAGAAGCTACTAGCTATGAGTAGGGTGAGCGAGTAGGCCTATAAGGGGAGGAAATGTTGTAAGGAGAGGATCATTCTGGTTTTCTGTGCTTTTGCTAGCTTAGTAGCTGTTTTGGGAGAGATTCCCCACCTCTCGAATTGGTGGGTTGGCTTTTGTATTGCCTTCGGGCCTTATCTTTTGAGTAAAGAAATCTTGTGGGGAGATACCTCACACTACCTTGCTCCATGGGCAGGAGAAGTTTATCCCATTTGACGAGGTGCAATGATGAAGACTCAGAGCTGCCCCTCCAAAGGTGATTCCTGAAAAGCTTCTCGATTGCTAAAGCCATTACAAGAATGCTGAGTATTTTCAAAGGTTACAACCTTTGAAAAAACATGAAATAGATCCCG

mRNA sequence

ATGGAAGTCACCGGGGGAAATCGAATGTTGTTGTCGTCCTCATCGATCGTCGGTGAGTTATCAATACAGAAGGGAAAGGCTCCGATGGGAGAAACACCTGAAAACTATCCTGGCAACCAAGGGAACGATTGGAATCGTTTCAAGAAGGTGGAGACGCCGATCTTCACGGGAACTGATTTGAAGTCGTGGATCTTCCGCGCTGAACGGTATTATGAGATTCAGAAACTGACAGAGGAAGAGAAGATAGTAGCCATGATCAGTTTCGACGGAATCGCCTTGGCGTGGTACCAGTATAAGGACAACCGGGAGAAGTACAAGGACTGGAACGACCTCCAAAGTCGACTGCGGGACCGATTTCACAGGCAATGTGCCCGATTACTTTCGATCAAACAGGAGGGAACCTTCGCCGAATATCGGCAGACGTTTGAGGCGCTGGCGGCGGCCCTACCGCAACTTTCCGATGAAGTTCTAGAGAGCGAATTTCTGAATGGGCTCAATTTTGTAGTCTGCGCCGAAGTCCTTGCAATGGAGCCCAAGGGACTATACCGGATCATTAGGAAGGCCCAGCTTCATAGATGA

Coding sequence (CDS)

ATGGAAGTCACCGGGGGAAATCGAATGTTGTTGTCGTCCTCATCGATCGTCGGTGAGTTATCAATACAGAAGGGAAAGGCTCCGATGGGAGAAACACCTGAAAACTATCCTGGCAACCAAGGGAACGATTGGAATCGTTTCAAGAAGGTGGAGACGCCGATCTTCACGGGAACTGATTTGAAGTCGTGGATCTTCCGCGCTGAACGGTATTATGAGATTCAGAAACTGACAGAGGAAGAGAAGATAGTAGCCATGATCAGTTTCGACGGAATCGCCTTGGCGTGGTACCAGTATAAGGACAACCGGGAGAAGTACAAGGACTGGAACGACCTCCAAAGTCGACTGCGGGACCGATTTCACAGGCAATGTGCCCGATTACTTTCGATCAAACAGGAGGGAACCTTCGCCGAATATCGGCAGACGTTTGAGGCGCTGGCGGCGGCCCTACCGCAACTTTCCGATGAAGTTCTAGAGAGCGAATTTCTGAATGGGCTCAATTTTGTAGTCTGCGCCGAAGTCCTTGCAATGGAGCCCAAGGGACTATACCGGATCATTAGGAAGGCCCAGCTTCATAGATGA

Protein sequence

MEVTGGNRMLLSSSSIVGELSIQKGKAPMGETPENYPGNQGNDWNRFKKVETPIFTGTDLKSWIFRAERYYEIQKLTEEEKIVAMISFDGIALAWYQYKDNREKYKDWNDLQSRLRDRFHRQCARLLSIKQEGTFAEYRQTFEALAAALPQLSDEVLESEFLNGLNFVVCAEVLAMEPKGLYRIIRKAQLHR
Homology
[Close]
BLAST of MC05g_new0277 vs. NCBI nr
Match: XP_022137369.1 (uncharacterized protein LOC111008840 [Momordica charantia])

HSP 1 Score: 145 bits (366), Expect = 2.48e-40
Identity = 74/118 (62.71%), Postives = 89/118 (75.42%), Query Frame = 0 

Query: 1   MEVTGGNRMLLSSSSIVGELSIQKGKAPMGETPENYPGNQGNDWNRFKKVETPIFTGTDL 60
           M  T G     S+S + GE  I+KGK    + P N    QGND NRFKKVE PIF G +L
Sbjct: 49  MAQTIGGSPSQSNSLLTGETLIRKGKEVAEDVPANNNEAQGNDRNRFKKVEMPIFGGEEL 108

Query: 61  KSWIFRAERYYEIQKLTEEEK-IVAMISFDGIALAWYQYKDNREKYKDWNDLQSRLRD 117
           ++WIFRAERY+EIQKLT+EEK IVA+ISFDGIALAWY+Y DNREK++DWNDL+ RLR+
Sbjct: 109 EAWIFRAERYFEIQKLTDEEKMIVAIISFDGIALAWYRYTDNREKHQDWNDLKGRLRE 166

[Close]
BLAST of MC05g_new0277 vs. NCBI nr
Match: XP_022148929.1 (uncharacterized protein LOC111017476 [Momordica charantia])

HSP 1 Score: 141 bits (355), Expect = 8.58e-38
Identity = 85/194 (43.81%), Postives = 115/194 (59.28%), Query Frame = 0 

Query: 2   EVTGGNRMLLSSSSIVGELSIQKGKAPMGETPENYPGNQGNDWNRFKKVETPIFTGTDLK 61
           E+ GG    +S    +GE  +QK K     T      +Q  D N+FKKVE PIF      
Sbjct: 49  EIIGGKTPSISQ---LGESLVQKNKLTEEATRVVQINDQAYDRNKFKKVEMPIFI----- 108

Query: 62  SWIFRAERYYEIQKLTEEEKIVAMISFDGIALAWYQYKDNREKYKDWNDLQSRLRDRFH- 121
                                  +ISFD +ALAWY++ + R+++ DW++L++R   RF  
Sbjct: 109 -----------------------VISFDVVALAWYRWHEPRDQFTDWDNLRTRSLKRFRK 168

Query: 122 ----RQCARLLSIKQEGTFAEYRQTFEALAAALPQLSDEVLESEFLNGLNFVVCAEVLAM 181
               RQCARLL+IKQEG+ AEY++ FEAL+A LPQLSDEVLE  FLNGL+ VV ++VLA 
Sbjct: 169 SKEGRQCARLLAIKQEGSVAEYQEAFEALSAPLPQLSDEVLECTFLNGLDLVVRSKVLAT 211

Query: 182 EPKGLYRIIRKAQL 190
           EP+GL +I+ +AQL
Sbjct: 229 EPQGLEQIMHRAQL 211

[Close]
BLAST of MC05g_new0277 vs. NCBI nr
Match: KAA0065392.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 147 bits (370), Expect = 7.25e-37
Identity = 85/185 (45.95%), Postives = 110/185 (59.46%), Query Frame = 0 

Query: 12  SSSSIVGELSIQKGKAPMGETPENYPGNQGNDWNRFKKVETPIFTGTDLKSWIFRAERYY 71
           SSS  +GE S +K   P   T         ND ++FKKVE P+FTG D +SW+FRAERY+
Sbjct: 92  SSSHDIGETSAEKKTDPDENT---------NDRSKFKKVEMPVFTGEDPESWLFRAERYF 151

Query: 72  EIQKLTEEEK-IVAMISFDGIALAWYQYKDNREKYKDWNDLQSRLRDRFHRQ-----CAR 131
           +I KLTE EK +V+ I FDG AL WY+ ++ REK+  W +L+ RL  RF        C R
Sbjct: 152 QIHKLTESEKMLVSTICFDGPALNWYRSQEEREKFASWTNLKERLLVRFQSTREGTVCGR 211

Query: 132 LLSIKQEGTFAEYRQTFEALAAALPQLSDEVLESEFLNGLNFVVCAEVLAMEPKGLYRII 190
            L I+QE T  EYR  F+ L A L  L D V+E  F+ GL   + AEV+  +PKGL   +
Sbjct: 212 FLRIQQETTVEEYRNRFDKLVAPLSDLEDRVVEETFMTGLFPWIRAEVILCKPKGLAEKM 267

[Close]
BLAST of MC05g_new0277 vs. NCBI nr
Match: KAA0058900.1 (gypsy/ty3 element polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 140 bits (353), Expect = 8.08e-37
Identity = 69/167 (41.32%), Postives = 108/167 (64.67%), Query Frame = 0 

Query: 30  GETPENYPGNQGNDWNRFKKVETPIFTGTDLKSWIFRAERYYEIQKLTEEEKI-VAMISF 89
           GET  +     G D  +FKK+E P+F G D   WI+RAE Y+++  L E+EK+ +A++S 
Sbjct: 79  GETSLSLEPGAGQDRIKFKKLEMPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSM 138

Query: 90  DGIALAWYQYKDNREKYKDWNDLQSRLRDRFHRQ-----CARLLSIKQEGTFAEYRQTFE 149
           +G  L W+++ +NR++++ W +L+ RL +RF  +     CAR L+IKQEG+  EY Q FE
Sbjct: 139 EGKGLCWFRWAENRKRFRSWKELKERLYNRFRNREYGTGCARFLAIKQEGSVGEYLQRFE 198

Query: 150 ALAAALPQLSDEVLESEFLNGLNFVVCAEVLAMEPKGLYRIIRKAQL 190
            L+A LP+++++VL   F NGL+ V+  EV AM   GL  ++  A+L
Sbjct: 199 ELSAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARL 245

[Close]
BLAST of MC05g_new0277 vs. NCBI nr
Match: TYK21115.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 146 bits (368), Expect = 8.31e-37
Identity = 78/165 (47.27%), Postives = 104/165 (63.03%), Query Frame = 0 

Query: 32  TPENYPGNQGNDWNRFKKVETPIFTGTDLKSWIFRAERYYEIQKLTEEEK-IVAMISFDG 91
           T +N P    ND ++FKKVE P+FTG D +SW+FRAERY++I KLTE EK +V+ I FDG
Sbjct: 102 TKKNEPDENSNDRSKFKKVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDG 161

Query: 92  IALAWYQYKDNREKYKDWNDLQSRLRDRFHRQ-----CARLLSIKQEGTFAEYRQTFEAL 151
            AL WY+ ++ REK+  W +L+ RL  RF          R L I+QE T  EYR  F+ L
Sbjct: 162 PALNWYRAQEEREKFVSWTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKL 221

Query: 152 AAALPQLSDEVLESEFLNGLNFVVCAEVLAMEPKGLYRIIRKAQL 190
            A L  + D V+E  F++GL   + AEV+   PKGL  ++R AQL
Sbjct: 222 VAPLSDVEDRVVEETFMSGLFPWIRAEVILCRPKGLAEMMRTAQL 266

[Close]
BLAST of MC05g_new0277 vs. ExPASy TrEMBL
Match: A0A6J1C719 (uncharacterized protein LOC111008840 OS=Momordica charantia OX=3673 GN=LOC111008840 PE=4 SV=1)

HSP 1 Score: 145 bits (366), Expect = 1.20e-40
Identity = 74/118 (62.71%), Postives = 89/118 (75.42%), Query Frame = 0 

Query: 1   MEVTGGNRMLLSSSSIVGELSIQKGKAPMGETPENYPGNQGNDWNRFKKVETPIFTGTDL 60
           M  T G     S+S + GE  I+KGK    + P N    QGND NRFKKVE PIF G +L
Sbjct: 49  MAQTIGGSPSQSNSLLTGETLIRKGKEVAEDVPANNNEAQGNDRNRFKKVEMPIFGGEEL 108

Query: 61  KSWIFRAERYYEIQKLTEEEK-IVAMISFDGIALAWYQYKDNREKYKDWNDLQSRLRD 117
           ++WIFRAERY+EIQKLT+EEK IVA+ISFDGIALAWY+Y DNREK++DWNDL+ RLR+
Sbjct: 109 EAWIFRAERYFEIQKLTDEEKMIVAIISFDGIALAWYRYTDNREKHQDWNDLKGRLRE 166

[Close]
BLAST of MC05g_new0277 vs. ExPASy TrEMBL
Match: A0A6J1D5H9 (uncharacterized protein LOC111017476 OS=Momordica charantia OX=3673 GN=LOC111017476 PE=4 SV=1)

HSP 1 Score: 141 bits (355), Expect = 4.15e-38
Identity = 85/194 (43.81%), Postives = 115/194 (59.28%), Query Frame = 0 

Query: 2   EVTGGNRMLLSSSSIVGELSIQKGKAPMGETPENYPGNQGNDWNRFKKVETPIFTGTDLK 61
           E+ GG    +S    +GE  +QK K     T      +Q  D N+FKKVE PIF      
Sbjct: 49  EIIGGKTPSISQ---LGESLVQKNKLTEEATRVVQINDQAYDRNKFKKVEMPIFI----- 108

Query: 62  SWIFRAERYYEIQKLTEEEKIVAMISFDGIALAWYQYKDNREKYKDWNDLQSRLRDRFH- 121
                                  +ISFD +ALAWY++ + R+++ DW++L++R   RF  
Sbjct: 109 -----------------------VISFDVVALAWYRWHEPRDQFTDWDNLRTRSLKRFRK 168

Query: 122 ----RQCARLLSIKQEGTFAEYRQTFEALAAALPQLSDEVLESEFLNGLNFVVCAEVLAM 181
               RQCARLL+IKQEG+ AEY++ FEAL+A LPQLSDEVLE  FLNGL+ VV ++VLA 
Sbjct: 169 SKEGRQCARLLAIKQEGSVAEYQEAFEALSAPLPQLSDEVLECTFLNGLDLVVRSKVLAT 211

Query: 182 EPKGLYRIIRKAQL 190
           EP+GL +I+ +AQL
Sbjct: 229 EPQGLEQIMHRAQL 211

[Close]
BLAST of MC05g_new0277 vs. ExPASy TrEMBL
Match: A0A5A7VAR4 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00620 PE=4 SV=1)

HSP 1 Score: 147 bits (370), Expect = 3.51e-37
Identity = 85/185 (45.95%), Postives = 110/185 (59.46%), Query Frame = 0 

Query: 12  SSSSIVGELSIQKGKAPMGETPENYPGNQGNDWNRFKKVETPIFTGTDLKSWIFRAERYY 71
           SSS  +GE S +K   P   T         ND ++FKKVE P+FTG D +SW+FRAERY+
Sbjct: 92  SSSHDIGETSAEKKTDPDENT---------NDRSKFKKVEMPVFTGEDPESWLFRAERYF 151

Query: 72  EIQKLTEEEK-IVAMISFDGIALAWYQYKDNREKYKDWNDLQSRLRDRFHRQ-----CAR 131
           +I KLTE EK +V+ I FDG AL WY+ ++ REK+  W +L+ RL  RF        C R
Sbjct: 152 QIHKLTESEKMLVSTICFDGPALNWYRSQEEREKFASWTNLKERLLVRFQSTREGTVCGR 211

Query: 132 LLSIKQEGTFAEYRQTFEALAAALPQLSDEVLESEFLNGLNFVVCAEVLAMEPKGLYRII 190
            L I+QE T  EYR  F+ L A L  L D V+E  F+ GL   + AEV+  +PKGL   +
Sbjct: 212 FLRIQQETTVEEYRNRFDKLVAPLSDLEDRVVEETFMTGLFPWIRAEVILCKPKGLAEKM 267

[Close]
BLAST of MC05g_new0277 vs. ExPASy TrEMBL
Match: A0A5A7UV13 (Gypsy/ty3 element polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G00670 PE=4 SV=1)

HSP 1 Score: 140 bits (353), Expect = 3.91e-37
Identity = 69/167 (41.32%), Postives = 108/167 (64.67%), Query Frame = 0 

Query: 30  GETPENYPGNQGNDWNRFKKVETPIFTGTDLKSWIFRAERYYEIQKLTEEEKI-VAMISF 89
           GET  +     G D  +FKK+E P+F G D   WI+RAE Y+++  L E+EK+ +A++S 
Sbjct: 79  GETSLSLEPGAGQDRIKFKKLEMPVFNGEDPDGWIYRAEHYFQMHLLNEQEKLKIAIVSM 138

Query: 90  DGIALAWYQYKDNREKYKDWNDLQSRLRDRFHRQ-----CARLLSIKQEGTFAEYRQTFE 149
           +G  L W+++ +NR++++ W +L+ RL +RF  +     CAR L+IKQEG+  EY Q FE
Sbjct: 139 EGKGLCWFRWAENRKRFRSWKELKERLYNRFRNREYGTGCARFLAIKQEGSVGEYLQRFE 198

Query: 150 ALAAALPQLSDEVLESEFLNGLNFVVCAEVLAMEPKGLYRIIRKAQL 190
            L+A LP+++++VL   F NGL+ V+  EV AM   GL  ++  A+L
Sbjct: 199 ELSAPLPEMAEDVLVGAFTNGLDPVIRTEVFAMRAVGLEDMMDAARL 245

[Close]
BLAST of MC05g_new0277 vs. ExPASy TrEMBL
Match: A0A5D3DC20 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00900 PE=4 SV=1)

HSP 1 Score: 146 bits (368), Expect = 4.02e-37
Identity = 78/165 (47.27%), Postives = 104/165 (63.03%), Query Frame = 0 

Query: 32  TPENYPGNQGNDWNRFKKVETPIFTGTDLKSWIFRAERYYEIQKLTEEEK-IVAMISFDG 91
           T +N P    ND ++FKKVE P+FTG D +SW+FRAERY++I KLTE EK +V+ I FDG
Sbjct: 102 TKKNEPDENSNDRSKFKKVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDG 161

Query: 92  IALAWYQYKDNREKYKDWNDLQSRLRDRFHRQ-----CARLLSIKQEGTFAEYRQTFEAL 151
            AL WY+ ++ REK+  W +L+ RL  RF          R L I+QE T  EYR  F+ L
Sbjct: 162 PALNWYRAQEEREKFVSWTNLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKL 221

Query: 152 AAALPQLSDEVLESEFLNGLNFVVCAEVLAMEPKGLYRIIRKAQL 190
            A L  + D V+E  F++GL   + AEV+   PKGL  ++R AQL
Sbjct: 222 VAPLSDVEDRVVEETFMSGLFPWIRAEVILCRPKGLAEMMRTAQL 266

[Close]
BLAST of MC05g_new0277 vs. TAIR 10
Match: AT3G42723.1 (aminoacyl-tRNA ligases;ATP binding;nucleotide binding )

HSP 1 Score: 45.1 bits (105), Expect = 7.6e-05
Identity = 35/152 (23.03%), Postives = 70/152 (46.05%), Query Frame = 0 

Query: 45  NRFKKVETPIFTGTDLKSWIFRAERYYEIQKLTEEEKI-VAMISFDGIALAWYQYKDNRE 104
           +R  +V  P+    +L+  +   E Y+    + E+E++ +   + +G    W ++   + 
Sbjct: 258 HREARVSRPL--DENLRRCLSNFENYFGENNIPEQERLQIVYSNLEGDIGQWIKHLWKKN 317

Query: 105 KYKDWNDL------QSRLRDRFHRQCARLLSIKQEGTFAEYRQTFEALAAALPQLSDEVL 164
               W +       +++   + + Q      I+QEG+  EYR+ FEAL      L  + L
Sbjct: 318 SPTSWKEFKCMMARETKTTMKVNHQ-PHYSGIQQEGSVREYRERFEALCLGSVILPGQGL 377

Query: 165 ESEFLNGLNFVVCAEVLAMEPKGLYRIIRKAQ 190
           E+ FL GL   +   V  ++P G+ +++  AQ
Sbjct: 378 EALFLQGLQPSLQTAVRELKPNGIVQMMDTAQ 406

The following BLAST results are available for this feature:
BLAST of MC05g_new0277 vs.
Match NameE-valueIdentityDescription
BLAST of MC05g_new0277 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022137369.12.48e-4062.71uncharacterized protein LOC111008840 [Momordica charantia][more]
XP_022148929.18.58e-3843.81uncharacterized protein LOC111017476 [Momordica charantia][more]
KAA0065392.17.25e-3745.95Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0058900.18.08e-3741.32gypsy/ty3 element polyprotein [Cucumis melo var. makuwa][more]
TYK21115.18.31e-3747.27transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa][more]
BLAST of MC05g_new0277 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C7191.20e-4062.71uncharacterized protein LOC111008840 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1D5H94.15e-3843.81uncharacterized protein LOC111017476 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A5A7VAR43.51e-3745.95Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7UV133.91e-3741.32Gypsy/ty3 element polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5D3DC204.02e-3747.27Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
BLAST of MC05g_new0277 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G42723.17.6e-0523.03aminoacyl-tRNA ligases;ATP binding;nucleotide binding [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 84..166
e-value: 1.0E-11
score: 44.9

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g_new0277.1MC05g_new0277.1mRNA