MC05g_new0217 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g_new0217
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC05: 11703721 .. 11704574 (+)
RNA-Seq ExpressionMC05g_new0217
SyntenyMC05g_new0217
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGGAGTGGGGAAATGGTGAGTGGGGAAGTGGTGACTTCTCCCTCACTCTTCCTCCCTTATAAAAGGAAGGTTCTCCCCTTCTCGGTTTCCCGGTCGTCGGCTGATTGAGTTTTTGAAACTCCAACGAGAAAATCTCTCTCTCGGTCTCTTGGTCTCCCTCTCAATTATAAGATGGTTCCTATAAATCGAGTTCTTAACATCCAGAGGATAGCGAGGAAGGTCGGAGTTGATGTCTACATTGAAGAAGTGTCATCAAAGGTATGTTTCACTAACTTCCTTTTAATCATGCTTATGTATTTTCTTTGTTGTAATTCTAAATCAAGATCGAAGCACACACATTCACGCGCTTTCGCTGTGGGATTCGATCCCTTCACTATAAGTGTGGTAAATTTCACAGTTTATCGTTATTAGGTTCATGGGGATGCGTATCTTATGCTCCATTAATGGTGTTACGCTAGATATAGATACGCTAGTTTATCCTAGCCACATATGATTTTAAAGACTCTGAATTTTCCTATGACGTTGAATTTTGCAAGAACAAAATTCAAAAGATCGTAAAGGCATGGAACACGGTTGTCAGAATTCAAAGTGCCCGATACCACAATAATGCATTTGAAGTGTACGAGCAGTGGCATTCGAATAGGGGAAAAACTGCGGTTCTCCAACCAATCGACAAGAACGAAGAGAAGCTGCAGATTCTCACTGGAAGAGTTCTTACTGAGATGAGCCCAAATCAACCCACTCAGCGGAAGACTCGCATGATAGAATATGAGATACGAGAAAGGAACTCCAAATCGGCTAGACTGCAATTAGGATCAATCAAAGTCTACCTCAAAGCATTGAACTAG

mRNA sequence

ATGGCGGGGAGTGGGGAAATGGTGAGTGGGGAAGTGGTGACTTCTCCCTCACTCTTCCTCCCTTATAAAAGGAAGAACAAAATTCAAAAGATCGTAAAGGCATGGAACACGGTTGTCAGAATTCAAAGTGCCCGATACCACAATAATGCATTTGAAGTGTACGAGCAGTGGCATTCGAATAGGGGAAAAACTGCGGTTCTCCAACCAATCGACAAGAACGAAGAGAAGCTGCAGATTCTCACTGGAAGAGTTCTTACTGAGATGAGCCCAAATCAACCCACTCAGCGGAAGACTCGCATGATAGAATATGAGATACGAGAAAGGAACTCCAAATCGGCTAGACTGCAATTAGGATCAATCAAAGTCTACCTCAAAGCATTGAACTAG

Coding sequence (CDS)

ATGGCGGGGAGTGGGGAAATGGTGAGTGGGGAAGTGGTGACTTCTCCCTCACTCTTCCTCCCTTATAAAAGGAAGAACAAAATTCAAAAGATCGTAAAGGCATGGAACACGGTTGTCAGAATTCAAAGTGCCCGATACCACAATAATGCATTTGAAGTGTACGAGCAGTGGCATTCGAATAGGGGAAAAACTGCGGTTCTCCAACCAATCGACAAGAACGAAGAGAAGCTGCAGATTCTCACTGGAAGAGTTCTTACTGAGATGAGCCCAAATCAACCCACTCAGCGGAAGACTCGCATGATAGAATATGAGATACGAGAAAGGAACTCCAAATCGGCTAGACTGCAATTAGGATCAATCAAAGTCTACCTCAAAGCATTGAACTAG

Protein sequence

MAGSGEMVSGEVVTSPSLFLPYKRKNKIQKIVKAWNTVVRIQSARYHNNAFEVYEQWHSNRGKTAVLQPIDKNEEKLQILTGRVLTEMSPNQPTQRKTRMIEYEIRERNSKSARLQLGSIKVYLKALN
Homology
[Close]
BLAST of MC05g_new0217 vs. NCBI nr
Match: XP_022147190.1 (uncharacterized protein LOC111016201 [Momordica charantia])

HSP 1 Score: 107 bits (267), Expect = 3.54e-24
Identity = 49/73 (67.12%), Postives = 60/73 (82.19%), Query Frame = 0 

Query: 25  KNKIQKIVKAWNTVVRIQSARYHNNAFEVYEQWHSNRGKTAVLQPIDKNEEKLQILTGRV 84
           KNKIQ++VKAW T+VRIQS  YH+N FE YE+WHS+RGKT VL P DK + KL++ T R+
Sbjct: 385 KNKIQEVVKAWKTIVRIQSGNYHDNIFEGYEKWHSSRGKTVVLLPTDKGKGKLEVPTRRI 444

Query: 85  LTEMSPNQPTQRK 97
           L+EMSPNQ TQRK
Sbjct: 445 LSEMSPNQSTQRK 457

[Close]
BLAST of MC05g_new0217 vs. NCBI nr
Match: XP_022150759.1 (uncharacterized protein LOC111018820 [Momordica charantia])

HSP 1 Score: 103 bits (258), Expect = 1.42e-23
Identity = 48/73 (65.75%), Postives = 58/73 (79.45%), Query Frame = 0 

Query: 25  KNKIQKIVKAWNTVVRIQSARYHNNAFEVYEQWHSNRGKTAVLQPIDKNEEKLQILTGRV 84
           KNKIQ++VKAW  +VRIQS  YH+N FE YEQWHS+RGKT VL   DK + KL++ TG +
Sbjct: 277 KNKIQEVVKAWKAIVRIQSGNYHDNIFEGYEQWHSSRGKTVVLLQTDKGKGKLEVPTGII 336

Query: 85  LTEMSPNQPTQRK 97
           L+EMSPNQ TQRK
Sbjct: 337 LSEMSPNQSTQRK 349

[Close]
BLAST of MC05g_new0217 vs. ExPASy TrEMBL
Match: A0A6J1CZG4 (uncharacterized protein LOC111016201 OS=Momordica charantia OX=3673 GN=LOC111016201 PE=4 SV=1)

HSP 1 Score: 107 bits (267), Expect = 1.71e-24
Identity = 49/73 (67.12%), Postives = 60/73 (82.19%), Query Frame = 0 

Query: 25  KNKIQKIVKAWNTVVRIQSARYHNNAFEVYEQWHSNRGKTAVLQPIDKNEEKLQILTGRV 84
           KNKIQ++VKAW T+VRIQS  YH+N FE YE+WHS+RGKT VL P DK + KL++ T R+
Sbjct: 385 KNKIQEVVKAWKTIVRIQSGNYHDNIFEGYEKWHSSRGKTVVLLPTDKGKGKLEVPTRRI 444

Query: 85  LTEMSPNQPTQRK 97
           L+EMSPNQ TQRK
Sbjct: 445 LSEMSPNQSTQRK 457

[Close]
BLAST of MC05g_new0217 vs. ExPASy TrEMBL
Match: A0A6J1DB13 (uncharacterized protein LOC111018820 OS=Momordica charantia OX=3673 GN=LOC111018820 PE=4 SV=1)

HSP 1 Score: 103 bits (258), Expect = 6.88e-24
Identity = 48/73 (65.75%), Postives = 58/73 (79.45%), Query Frame = 0 

Query: 25  KNKIQKIVKAWNTVVRIQSARYHNNAFEVYEQWHSNRGKTAVLQPIDKNEEKLQILTGRV 84
           KNKIQ++VKAW  +VRIQS  YH+N FE YEQWHS+RGKT VL   DK + KL++ TG +
Sbjct: 277 KNKIQEVVKAWKAIVRIQSGNYHDNIFEGYEQWHSSRGKTVVLLQTDKGKGKLEVPTGII 336

Query: 85  LTEMSPNQPTQRK 97
           L+EMSPNQ TQRK
Sbjct: 337 LSEMSPNQSTQRK 349

The following BLAST results are available for this feature:
BLAST of MC05g_new0217 vs.
Match NameE-valueIdentityDescription
BLAST of MC05g_new0217 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022147190.13.54e-2467.12uncharacterized protein LOC111016201 [Momordica charantia][more]
XP_022150759.11.42e-2365.75uncharacterized protein LOC111018820 [Momordica charantia][more]
BLAST of MC05g_new0217 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CZG41.71e-2467.12uncharacterized protein LOC111016201 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1DB136.88e-2465.75uncharacterized protein LOC111018820 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
BLAST of MC05g_new0217 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g_new0217.1MC05g_new0217.1mRNA