MC05g_new0195 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g_new0195
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibonuclease H
LocationMC05: 10501239 .. 10502541 (+)
RNA-Seq ExpressionMC05g_new0195
SyntenyMC05g_new0195
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAATCTTATTATCAATATTCCTATTCCAAGGAGGGACGTGGAAGACGAAGTTATTTGGGTTCCAGATAAAAAAGACTTTTTCTCTGTAAAAAGTGCCTACTATTTAGACACTGCTGACCAAATGAGAGAAGAGGCAACCTCCTCTAACAATGACTTACAGAGGCGCACTTGGAATTGTTTATGGAAATCTAAAGTCACCCCAAAAGCAAAGATTTGTTGCTGGAAACTCTTGACTGATATTTTACCTACAAATGTTAATTTGTTTAAAAAAGGTATTCGCCCTGACTTTTTGTGTCCTCTGTGCAGGAAATATGAAGAGACGGCCAAGCACCTTTGTTGGGAGTGTAAGGTTACGAAACCTTTATGGAATTTTTTTGTGGATTGTGATTTTGGCTCTGTTTTTGGTGACAGGTTGATGCAAACAGGCAGAGATTATTGGGACTGGATTGTGATTCATTCTACACAAGAAGTGATTAACAAAACAATTTTCATGGTGTGGCAAATATGGACTTTTCGAAACAAGGTGGTGTTTGGAGGCGAGGATCCCAACCAGCAAATTTTGGCACTTCACATTGACAAGCAAATCCATATCCAGGAAATTTCTACTCATAATCACAAAAGGGACAACAACTTGTGCTCAAATTCTAATTGCATGATAAGGCATAGCCCGGACCCAGCAACAACGTCAATTCAAGCACAAGTTCGTGAAATCTGGTCCCCCCCTTTAAATATCTGGAAAATGAACTCTGATGCATCCTGGTTTGACGACCAAAATCGGGGTGGGATTGGATGGGTGATTCGAGATTGGGTTGGAGAAGTGTCCTCGTCGGCAATGCCTCTGTTAGGGAACAGAAAAGCATCAAGTTCTTAGAAGCCTTGGCGATTTTGGAGGGATTAAGAAGCATCAGTAATGAAGACCATAAAGAGATTTATCTGGAGACGGATTCGTTGGAGATGGAGAAGTTGTTGAACACGCCGACGCAGATATCACTGAAATTTATTGCATTGTTGATTAAATTAAATCCCTCATGGTGAAAAAATCGGTGGTCTCTATCACTTTCATCAAAAGGGAAGCAAATTCTTTGACTCACATGGTTGCTCGTCGGGCTTCGGCAATGGGGGTTTCTATTTGGCATGGGATTACCCAACTTCCTGGGTGTGCCACTTGAATATTTATTTTTAGCCTGTTTAGTTCCTTTATGTCAAAAAAAAAAAAATCAACATACCTAGAAGATGAAGTTGCTGATGTGGAGACGAATTACCGTTTTGGATCAGAAATTATTCATAGGGAGTTAGCTGGGG

mRNA sequence

ATGAGAGAAGAGGCAACCTCCTCTAACAATGACTTACAGAGGCGCACTTGGAATTGTTTATGGAAATCTAAAGTCACCCCAAAAGCAAAGATTTGTTGCTGGAAACTCTTGACTGATATTTTACCTACAAATGTTAATTTGTTTAAAAAAGGTATTCGCCCTGACTTTTTGTGTCCTCTGTGCAGGAAATATGAAGAGACGGCCAAGCACCTTTGTTGGGAGTGTAAGGTTACGAAACCTTTATGGAATTTTTTTGTGGATTGTGATTTTGGCTCTGTTTTTGGTGACAGGTTGATGCAAACAGGCAGAGATTATTGGGACTGGATTGTGATTCATTCTACACAAGAAGTGATTAACAAAACAATTTTCATGGTGTGGCAAATATGGACTTTTCGAAACAAGGTGGTGTTTGGAGGCGAGGATCCCAACCAGCAAATTTTGGCACTTCACATTGACAAGCAAATCCATATCCAGGAAATTTCTACTCATAATCACAAAAGGGACAACAACTTGTGCTCAAATTCTAATTGCATGATAAGGCATAGCCCGGACCCAGCAACAACGTCAATTCAAGCACAAGTTCGTGAAATCTGGTCCCCCCCTTTAAATATCTGGAAAATGAACTCTGATGCATCCTGGTTTGACGACCAAAATCGGGGTGGGATTGGATGGGTGATTCGAGATTGGGTTGGAGAAGTGTCCTCGTCGGCAATGCCTCTGTTAGGGAACAGAAAAGCATCAAGTTCTTAG

Coding sequence (CDS)

ATGAGAGAAGAGGCAACCTCCTCTAACAATGACTTACAGAGGCGCACTTGGAATTGTTTATGGAAATCTAAAGTCACCCCAAAAGCAAAGATTTGTTGCTGGAAACTCTTGACTGATATTTTACCTACAAATGTTAATTTGTTTAAAAAAGGTATTCGCCCTGACTTTTTGTGTCCTCTGTGCAGGAAATATGAAGAGACGGCCAAGCACCTTTGTTGGGAGTGTAAGGTTACGAAACCTTTATGGAATTTTTTTGTGGATTGTGATTTTGGCTCTGTTTTTGGTGACAGGTTGATGCAAACAGGCAGAGATTATTGGGACTGGATTGTGATTCATTCTACACAAGAAGTGATTAACAAAACAATTTTCATGGTGTGGCAAATATGGACTTTTCGAAACAAGGTGGTGTTTGGAGGCGAGGATCCCAACCAGCAAATTTTGGCACTTCACATTGACAAGCAAATCCATATCCAGGAAATTTCTACTCATAATCACAAAAGGGACAACAACTTGTGCTCAAATTCTAATTGCATGATAAGGCATAGCCCGGACCCAGCAACAACGTCAATTCAAGCACAAGTTCGTGAAATCTGGTCCCCCCCTTTAAATATCTGGAAAATGAACTCTGATGCATCCTGGTTTGACGACCAAAATCGGGGTGGGATTGGATGGGTGATTCGAGATTGGGTTGGAGAAGTGTCCTCGTCGGCAATGCCTCTGTTAGGGAACAGAAAAGCATCAAGTTCTTAG

Protein sequence

MREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWIVIHSTQEVINKTIFMVWQIWTFRNKVVFGGEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPPLNIWKMNSDASWFDDQNRGGIGWVIRDWVGEVSSSAMPLLGNRKASSS
Homology
BLAST of MC05g_new0195 vs. NCBI nr
Match: XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia])

HSP 1 Score: 109 bits (272), Expect = 6.03e-24
Identity = 57/173 (32.95%), Postives = 86/173 (49.71%), Query Frame = 0

Query: 62  RKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWIVIHSTQEVINKT 121
           RK EET +H+ WECKV K +W      +    + DR   T ++YW+W++  + +E   ++
Sbjct: 131 RKKEETTQHILWECKVIKDIWINCTPIEANFFYIDRTNWTTKEYWEWLMDKAGEEERRRS 190

Query: 122 IFMVWQIWTFRNKVVFGGEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRH 181
           + +  QIW  RNK +F G     + + L ID+ I             N+   ++N   + 
Sbjct: 191 MIIACQIWEMRNKSIFKGVHSETRDIQLAIDRYI------------INSAGQDTNLKRKS 250

Query: 182 SPDPATTSIQAQVREIWSPPL-NIWKMNSDASWFDDQNRGGIGWVIRDWVGEV 233
                   I    R  W PP  N WK+N+DA+W  D N  GIGW++RD  GEV
Sbjct: 251 KDFHPIRRIGDNTRARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRDEKGEV 291

BLAST of MC05g_new0195 vs. NCBI nr
Match: XP_018823930.2 (uncharacterized protein LOC108993460 [Juglans regia] >KAF5442887.1 hypothetical protein F2P56_035499 [Juglans regia])

HSP 1 Score: 110 bits (274), Expect = 2.35e-23
Identity = 79/262 (30.15%), Postives = 117/262 (44.66%), Query Frame = 0

Query: 1   MREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPL 60
           M + + +SN++     WN LWK KV  K KI  W+   +ILPT VNL K+ I    +CP+
Sbjct: 376 MGQASDTSNHEA---LWNRLWKLKVPNKIKIFIWRSAREILPTRVNLHKRKIIDSPMCPI 435

Query: 61  CRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWIVIHST------ 120
           C  + ET  H+ W CK  + +W         S+   R+ ++  +   +  + S       
Sbjct: 436 CLIHPETVSHVLWTCKAAQDVW---------SISSRRIQKSKTEVASFNDLLSNLLSTLP 495

Query: 121 QEVINKTIFMVWQIWTFRNKVVFGGE-DPNQQILALHIDKQIHIQEISTHNHKRDNNLCS 180
            E   +  F   +IW  RNK VF  +  P QQIL L       +++I  + H+       
Sbjct: 496 PEDHTRLAFTAKEIWFRRNKFVFESKFTPPQQILKLVSSSMTDLEQIERNQHR------- 555

Query: 181 NSNCMIRHSPDPATTSIQAQVREIW-SPPLNIWKMNSDASWFDDQNRGGIGWVIRDWVGE 240
                         TS Q Q    W  PP+N++K+N D +      R GIG  IRDW+G 
Sbjct: 556 --------------TSTQIQGTARWCKPPINVYKLNWDTAIDKINCRVGIGVSIRDWLGL 604

Query: 241 VSSSAM--------PLLGNRKA 246
           V+++          PLLG   A
Sbjct: 616 VTATLRSPCNSFPDPLLGEALA 604

BLAST of MC05g_new0195 vs. NCBI nr
Match: XP_030479077.1 (uncharacterized protein LOC115696311 [Cannabis sativa])

HSP 1 Score: 108 bits (271), Expect = 7.27e-23
Identity = 68/247 (27.53%), Postives = 117/247 (47.37%), Query Frame = 0

Query: 7    SSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEE 66
            SS +DL    WN LW  K+  K KI  W+++ D LPT VNL  + I     C LC    E
Sbjct: 833  SSTSDLNHGWWNRLWALKLPKKVKIFAWRVINDALPTQVNLMHRKISVVASCSLCNCPRE 892

Query: 67   TAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLM---QTGRDYWDWIVIHSTQEVINKTIF 126
            ++ H  + C   + +W+         VF    +     G + +  I      +V+ K + 
Sbjct: 893  SSGHALFFCTRAQQVWSL------AHVFSPNPLISRMNGFEIFSSIATVKQNDVLAKILC 952

Query: 127  MVWQIWTFRNKVVFGGEDPNQQILALHIDKQI------HIQEISTHNHKRDNNLCSNSNC 186
            ++W IWT RNK + G +     ++   +D  +      H +++S       ++ C+N + 
Sbjct: 953  LMWCIWTERNKEIHGSKPKPTGVICSFVDMYVQQFLLAHAKQVSM------DSSCNNFD- 1012

Query: 187  MIRHSPDPATTSIQAQVREIWS-PPLNIWKMNSDASWFDDQNRGGIGWVIRDWVGEVSSS 242
               ++P  A      Q   +W+ PP   +K+N D ++ D+ +  GIG V+RD+ G+V  +
Sbjct: 1013 ---NAPATAPQGSHPQASSVWALPPTGSYKLNIDVAFNDEGSVIGIGDVVRDYFGDVVGA 1063

BLAST of MC05g_new0195 vs. NCBI nr
Match: XP_030487586.1 (uncharacterized protein LOC115704524 [Cannabis sativa])

HSP 1 Score: 104 bits (260), Expect = 3.14e-22
Identity = 66/231 (28.57%), Postives = 109/231 (47.19%), Query Frame = 0

Query: 5   ATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKY 64
           A++SN    R+ WN LW  K+  K KI  W+++ D LPT VNL  + I P+  C LC  +
Sbjct: 9   ASTSN----RKWWNRLWALKLPKKVKIFAWRVINDALPTAVNLMHRKILPNAACSLCNCH 68

Query: 65  EETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWIVIHSTQEVINKTIFM 124
            E+  H  + C   K +W+        +   +     G D +  +    T   + + + +
Sbjct: 69  RESLGHAIFLCTRAKQVWSI-AKVHMATAIPNIYQLNGFDIFSSLAAVHTNTELERILCI 128

Query: 125 VWQIWTFRNKVVFGGEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPD 184
           +W IWT RNK + G +  +  I+    D  ++    ST   +       +SN +    P 
Sbjct: 129 MWSIWTERNKEIHGTKPKSTSIICSFADHYVNQYINSTLQPQG-----FDSNGLPHPQPT 188

Query: 185 PATTSIQAQVREI-WS-PPLNIWKMNSDASWFDDQNRGGIGWVIRDWVGEV 233
            A +    Q   I W+ PP    K+N DA++ +D +  G+G V+RD+ G+V
Sbjct: 189 GAKSISTTQTEPIKWTHPPAGCLKLNVDAAFDEDGSVIGVGAVVRDYFGDV 229

BLAST of MC05g_new0195 vs. NCBI nr
Match: XP_030964645.1 (uncharacterized protein LOC115985893 [Quercus lobata])

HSP 1 Score: 105 bits (261), Expect = 1.51e-21
Identity = 66/233 (28.33%), Postives = 96/233 (41.20%), Query Frame = 0

Query: 7   SSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEE 66
           SSN    ++ W+ +W+ +V  K +   W+   +ILPT  NLF++ I PD +C +C  +EE
Sbjct: 790 SSNATCMKKFWSFIWRLRVPNKIRSFTWRACRNILPTKANLFRRKITPDSICEVCGNFEE 849

Query: 67  TAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWI-----VIHSTQEVINKT 126
           T  H+ W C   K +W          +  D++M    ++ D +     V   T+E I   
Sbjct: 850 TTSHVLWHCHRAKEVWKEV------GLDTDKVMDKCPEFIDLVWYARNVKQWTEEDIGLM 909

Query: 127 IFMVWQIWTFRNKVVFGGEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRH 186
           +   W IWT RN+V  G       +LA      +                      M  H
Sbjct: 910 VMTAWGIWTNRNEVRHGKNRKPAAVLAKWTKSYLE------------------DYLMANH 969

Query: 187 SPDPATTSIQAQVREIWSPPLNIW-KMNSDASWFDDQNRGGIGWVIRDWVGEV 233
           S  P   S +      W  P   W K N D + F  Q   G+G VIRD  G V
Sbjct: 970 STRPYKESTEVT----WQLPKPPWFKANMDGAVFSQQKEAGVGVVIRDHFGAV 994

BLAST of MC05g_new0195 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 109 bits (272), Expect = 2.92e-24
Identity = 57/173 (32.95%), Postives = 86/173 (49.71%), Query Frame = 0

Query: 62  RKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWIVIHSTQEVINKT 121
           RK EET +H+ WECKV K +W      +    + DR   T ++YW+W++  + +E   ++
Sbjct: 131 RKKEETTQHILWECKVIKDIWINCTPIEANFFYIDRTNWTTKEYWEWLMDKAGEEERRRS 190

Query: 122 IFMVWQIWTFRNKVVFGGEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRH 181
           + +  QIW  RNK +F G     + + L ID+ I             N+   ++N   + 
Sbjct: 191 MIIACQIWEMRNKSIFKGVHSETRDIQLAIDRYI------------INSAGQDTNLKRKS 250

Query: 182 SPDPATTSIQAQVREIWSPPL-NIWKMNSDASWFDDQNRGGIGWVIRDWVGEV 233
                   I    R  W PP  N WK+N+DA+W  D N  GIGW++RD  GEV
Sbjct: 251 KDFHPIRRIGDNTRARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRDEKGEV 291

BLAST of MC05g_new0195 vs. ExPASy TrEMBL
Match: A0A2I4EWZ9 (uncharacterized protein LOC108993460 OS=Juglans regia OX=51240 GN=LOC108993460 PE=4 SV=2)

HSP 1 Score: 110 bits (274), Expect = 1.14e-23
Identity = 79/262 (30.15%), Postives = 117/262 (44.66%), Query Frame = 0

Query: 1   MREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPL 60
           M + + +SN++     WN LWK KV  K KI  W+   +ILPT VNL K+ I    +CP+
Sbjct: 376 MGQASDTSNHEA---LWNRLWKLKVPNKIKIFIWRSAREILPTRVNLHKRKIIDSPMCPI 435

Query: 61  CRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWIVIHST------ 120
           C  + ET  H+ W CK  + +W         S+   R+ ++  +   +  + S       
Sbjct: 436 CLIHPETVSHVLWTCKAAQDVW---------SISSRRIQKSKTEVASFNDLLSNLLSTLP 495

Query: 121 QEVINKTIFMVWQIWTFRNKVVFGGE-DPNQQILALHIDKQIHIQEISTHNHKRDNNLCS 180
            E   +  F   +IW  RNK VF  +  P QQIL L       +++I  + H+       
Sbjct: 496 PEDHTRLAFTAKEIWFRRNKFVFESKFTPPQQILKLVSSSMTDLEQIERNQHR------- 555

Query: 181 NSNCMIRHSPDPATTSIQAQVREIW-SPPLNIWKMNSDASWFDDQNRGGIGWVIRDWVGE 240
                         TS Q Q    W  PP+N++K+N D +      R GIG  IRDW+G 
Sbjct: 556 --------------TSTQIQGTARWCKPPINVYKLNWDTAIDKINCRVGIGVSIRDWLGL 604

Query: 241 VSSSAM--------PLLGNRKA 246
           V+++          PLLG   A
Sbjct: 616 VTATLRSPCNSFPDPLLGEALA 604

BLAST of MC05g_new0195 vs. ExPASy TrEMBL
Match: A0A5B7A5C8 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_021401 PE=4 SV=1)

HSP 1 Score: 108 bits (271), Expect = 2.63e-23
Identity = 67/241 (27.80%), Postives = 107/241 (44.40%), Query Frame = 0

Query: 3   EEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCR 62
           EE+  SN ++  + W  LW   +  K KI  W+ + DILPT   L ++ I  DF C LC 
Sbjct: 258 EESECSNREIMDKLWKTLWSLSIPNKIKIFLWRAIVDILPTGTKLAQRHIPVDFRCKLCG 317

Query: 63  KYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWIVIHSTQEVINKTI 122
              ET  HL  +C   + +W  FV      +  D+        ++++        +    
Sbjct: 318 DQAETPVHLFTQCAWVRIVWENFVF----HLPKDKCFLDFCQLFEFLCSSLDMAEVEVCC 377

Query: 123 FMVWQIWTFRNKVVFGGEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHS 182
            M+W +W  RN +V  G    +  + +  D   +++E     HK           ++   
Sbjct: 378 IMLWLVWGHRNAIVHSGR--GRFPVGVFSDALQYLKEFQDAQHKMG---------VVPLR 437

Query: 183 PDPATTSIQAQVREIWSPPLN-IWKMNSDASWFDDQNRGGIGWVIRDWVGEVSSS-AMPL 241
           P    ++        W PP++ ++K+N D SW   +N GG+G VIRDW GEV    A PL
Sbjct: 438 PVGVGSAS-------WMPPVDGVYKLNIDGSWLPGENTGGVGGVIRDWKGEVIGGFAKPL 476

BLAST of MC05g_new0195 vs. ExPASy TrEMBL
Match: A0A803QG02 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 108 bits (271), Expect = 3.47e-23
Identity = 68/247 (27.53%), Postives = 117/247 (47.37%), Query Frame = 0

Query: 7   SSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEE 66
           SS +DL    WN LW  K+  K KI  W+++ D LPT VNL  + I     C LC    E
Sbjct: 752 SSTSDLNHGWWNRLWALKLPKKVKIFAWRVINDALPTQVNLMHRKISVVASCSLCNCPRE 811

Query: 67  TAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLM---QTGRDYWDWIVIHSTQEVINKTIF 126
           ++ H  + C   + +W+         VF    +     G + +  I      +V+ K + 
Sbjct: 812 SSGHALFFCTRAQQVWSL------AHVFSPNPLISRMNGFEIFSSIATVKQNDVLAKILC 871

Query: 127 MVWQIWTFRNKVVFGGEDPNQQILALHIDKQI------HIQEISTHNHKRDNNLCSNSNC 186
           ++W IWT RNK + G +     ++   +D  +      H +++S       ++ C+N + 
Sbjct: 872 LMWCIWTERNKEIHGSKPKPTGVICSFVDMYVQQFLLAHAKQVSM------DSSCNNFD- 931

Query: 187 MIRHSPDPATTSIQAQVREIWS-PPLNIWKMNSDASWFDDQNRGGIGWVIRDWVGEVSSS 242
              ++P  A      Q   +W+ PP   +K+N D ++ D+ +  GIG V+RD+ G+V  +
Sbjct: 932 ---NAPATAPQGSHPQASSVWALPPTGSYKLNIDVAFNDEGSVIGIGDVVRDYFGDVVGA 982

BLAST of MC05g_new0195 vs. ExPASy TrEMBL
Match: A0A803NY29 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 104 bits (260), Expect = 1.52e-22
Identity = 66/231 (28.57%), Postives = 109/231 (47.19%), Query Frame = 0

Query: 5   ATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKY 64
           A++SN    R+ WN LW  K+  K KI  W+++ D LPT VNL  + I P+  C LC  +
Sbjct: 9   ASTSN----RKWWNRLWALKLPKKVKIFAWRVINDALPTAVNLMHRKILPNAACSLCNCH 68

Query: 65  EETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWIVIHSTQEVINKTIFM 124
            E+  H  + C   K +W+        +   +     G D +  +    T   + + + +
Sbjct: 69  RESLGHAIFLCTRAKQVWSI-AKVHMATAIPNIYQLNGFDIFSSLAAVHTNTELERILCI 128

Query: 125 VWQIWTFRNKVVFGGEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPD 184
           +W IWT RNK + G +  +  I+    D  ++    ST   +       +SN +    P 
Sbjct: 129 MWSIWTERNKEIHGTKPKSTSIICSFADHYVNQYINSTLQPQG-----FDSNGLPHPQPT 188

Query: 185 PATTSIQAQVREI-WS-PPLNIWKMNSDASWFDDQNRGGIGWVIRDWVGEV 233
            A +    Q   I W+ PP    K+N DA++ +D +  G+G V+RD+ G+V
Sbjct: 189 GAKSISTTQTEPIKWTHPPAGCLKLNVDAAFDEDGSVIGVGAVVRDYFGDV 229

BLAST of MC05g_new0195 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.9e-16
Identity = 60/230 (26.09%), Postives = 101/230 (43.91%), Query Frame = 0

Query: 20  LWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTK 79
           +WKS+ +PK +   WK L++ LP    L  + +  +  C  C   +ET  HL ++C   +
Sbjct: 257 IWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFAR 316

Query: 80  PLWNF-FVDCDFGSVFGDRLMQTGRDYWDWIVIHST---QEVINKTIFMVWQIWTFRNKV 139
             W    +    G  + D +      YW + + +     ++      +++W++W  RN++
Sbjct: 317 LTWAISSIPIPLGGEWADSIYV--NLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNEL 376

Query: 140 VFGGEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVR 199
           VF G + N Q +    +  +    I T     +   C     + R S             
Sbjct: 377 VFRGREFNAQEVLRRAEDDLEEWRIRT-----EAESCGTKPQVNRSSCGR---------- 436

Query: 200 EIWSPPLNIW-KMNSDASWFDDQNRGGIGWVIRDWVGEV---SSSAMPLL 242
             W PP + W K N+DA+W  D  R GIGWV+R+  GEV    + A+P L
Sbjct: 437 --WRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKL 467

BLAST of MC05g_new0195 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-13
Identity = 62/231 (26.84%), Postives = 97/231 (41.99%), Query Frame = 0

Query: 11  DLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKH 70
           DL+ R WN      + PK K   W+ L+  L T   L  +G+R D  CP C +  E+  H
Sbjct: 157 DLKTRIWNL----PIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINH 216

Query: 71  LCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWI------VIHSTQEVINK--TI 130
             + C      W         S+  ++LM    D+ + I      V  +T    +K   +
Sbjct: 217 ALFTCPFATMAWRL----SDSSLIRNQLM--SNDFEENISNILNFVQDTTMSDFHKLLPV 276

Query: 131 FMVWQIWTFRNKVVFG--GEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIR 190
           +++W+IW  RN VVF    E P++ +L+     + H    +T +HK+             
Sbjct: 277 WLIWRIWKARNNVVFNKFRESPSKTVLS--AKAETHDWLNATQSHKK------------- 336

Query: 191 HSPDPATTSIQAQVREIWSPPLNIWKMNSDASWFDDQNRGGIGWVIRDWVG 232
            +P P T  I     E  +PP    K N DA +   +     GW+IR+  G
Sbjct: 337 -TPSP-TRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYG 360

BLAST of MC05g_new0195 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-05
Identity = 19/56 (33.93%), Postives = 29/56 (51.79%), Query Frame = 0

Query: 20 LWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWEC 76
          +W  K++PK K+  WK L + LP    L  + I  +  C  CR + ET  H+ + C
Sbjct: 9  IWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRCRDF-ETITHILFNC 63

BLAST of MC05g_new0195 vs. TAIR 10
Match: AT5G18880.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-05
Identity = 35/145 (24.14%), Postives = 58/145 (40.00%), Query Frame = 0

Query: 20  LWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTK 79
           +W  +  P+  +  W    + LPT   L   G+       LC   +ET  HL +EC  + 
Sbjct: 131 VWFKEYIPRFSLITWMSFLERLPTRDRLRGWGMNIPSSWVLCSNGDETHAHLFFECSFSL 190

Query: 80  PLWNFFVDCDFGS-VFGDRLMQTGRDYWDWIVIHSTQEVINKTIFM--VWQIWTFRNKVV 139
            +W FF      S  FG   +     +   + + S    I K +    V+ +W  RN  +
Sbjct: 191 AIWEFFASKFRPSPPFG---LPAASSWILQLPLRSHSTTILKLLLQSAVYHVWKERNARI 250

Query: 140 FGGEDPNQQILALHIDKQIHIQEIS 162
           F     +   L L ID+ +  + +S
Sbjct: 251 FTSISSSASSLRLAIDRTMRNRLLS 272

BLAST of MC05g_new0195 vs. TAIR 10
Match: AT1G43730.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 46.2 bits (108), Expect = 4.4e-05
Identity = 20/69 (28.99%), Postives = 31/69 (44.93%), Query Frame = 0

Query: 17  WNCLWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECK 76
           +  +W     PK    CW +  + L T   L   G+    +C LC  ++E+  HL +EC 
Sbjct: 152 YKAVWFKNHVPKHAFICWVVAWNRLHTRDRLRSWGLSIPAVCLLCNSHDESRAHLFFECP 211

Query: 77  VTKPLWNFF 86
               +W FF
Sbjct: 212 FCGAVWRFF 220

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022154990.16.03e-2432.95uncharacterized protein LOC111022134 isoform X1 [Momordica charantia][more]
XP_018823930.22.35e-2330.15uncharacterized protein LOC108993460 [Juglans regia] >KAF5442887.1 hypothetical ... [more]
XP_030479077.17.27e-2327.53uncharacterized protein LOC115696311 [Cannabis sativa][more]
XP_030487586.13.14e-2228.57uncharacterized protein LOC115704524 [Cannabis sativa][more]
XP_030964645.11.51e-2128.33uncharacterized protein LOC115985893 [Quercus lobata][more]
Match NameE-valueIdentityDescription
A0A6J1DL642.92e-2432.95uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A2I4EWZ91.14e-2330.15uncharacterized protein LOC108993460 OS=Juglans regia OX=51240 GN=LOC108993460 P... [more]
A0A5B7A5C82.63e-2327.80Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_021401 PE=4 SV=1[more]
A0A803QG023.47e-2327.53Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803NY291.52e-2228.57Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G29090.11.9e-1626.09Ribonuclease H-like superfamily protein [more]
AT3G09510.12.0e-1326.84Ribonuclease H-like superfamily protein [more]
AT3G26855.13.4e-0533.93RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT5G18880.13.4e-0524.14RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT1G43730.14.4e-0528.99RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 12..82
e-value: 3.8E-16
score: 59.6
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 10..233
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 10..233

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g_new0195.1MC05g_new0195.1mRNA