MC05g_new0158 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g_new0158
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC05: 8525276 .. 8525590 (+)
RNA-Seq ExpressionMC05g_new0158
SyntenyMC05g_new0158
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTACCTTAAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATCATGGAGACGGTCCTTGGGAGAAGATCAAATTATATAATAGGAATGAGATATGGACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTCTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAGAATTGGCAACTCAACGAAAAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTTGAGGCTCAAAGCCAGGAGTTTTCAAAGCCAGGAGTTTAA

mRNA sequence

ATGATTACCTTAAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATCATGGAGACGGTCCTTGGGAGAAGATCAAATTATATAATAGGAATGAGATATGGACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTCTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAGAATTGGCAACTCAACGAAAAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTTGAGGCTCAAAGCCAGGAGTTTTCAAAGCCAGGAGTTTAA

Coding sequence (CDS)

ATGATTACCTTAAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATCATGGAGACGGTCCTTGGGAGAAGATCAAATTATATAATAGGAATGAGATATGGACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTCTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAGAATTGGCAACTCAACGAAAAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTTGAGGCTCAAAGCCAGGAGTTTTCAAAGCCAGGAGTTTAA

Protein sequence

MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMRYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKAFEAQSQEFSKPGV
Homology
BLAST of MC05g_new0158 vs. NCBI nr
Match: XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia])

HSP 1 Score: 155 bits (391), Expect = 4.33e-45
Identity = 82/101 (81.19%), Postives = 87/101 (86.14%), Query Frame = 0

Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMRYGPKPTRNKGSSSKYSDEYVESLE 60
           MITLKAYHASQGDEKTEEEIMETVLG+RSNY+IGM YGPKPTRNKGSSSKYSDEYVESLE
Sbjct: 107 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLE 166

Query: 61  ARLQKHEEELATQRKANEDQQIATQEQIQKAFEAQSQEFSK 101
           ARLQKHEEE+A            TQEQIQKA EAQSQEF++
Sbjct: 167 ARLQKHEEEMAR----------TTQEQIQKALEAQSQEFNR 197

BLAST of MC05g_new0158 vs. NCBI nr
Match: XP_022148911.1 (uncharacterized protein LOC111017461 [Momordica charantia])

HSP 1 Score: 155 bits (391), Expect = 1.30e-44
Identity = 82/101 (81.19%), Postives = 87/101 (86.14%), Query Frame = 0

Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMRYGPKPTRNKGSSSKYSDEYVESLE 60
           MITLKAYHASQGDEKTEEEIMETVLG+RSNY+IGM YGPKPTRNKGSSSKYSDEYVESLE
Sbjct: 112 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLE 171

Query: 61  ARLQKHEEELATQRKANEDQQIATQEQIQKAFEAQSQEFSK 101
           ARLQKHEEE+A            TQEQIQKA EAQSQEF++
Sbjct: 172 ARLQKHEEEMAR----------TTQEQIQKALEAQSQEFNR 202

BLAST of MC05g_new0158 vs. NCBI nr
Match: XP_022153681.1 (uncharacterized protein LOC111021138 [Momordica charantia])

HSP 1 Score: 81.6 bits (200), Expect = 5.44e-17
Identity = 39/41 (95.12%), Postives = 39/41 (95.12%), Query Frame = 0

Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMRYGPKP 41
           MITLKA HASQGDEKTEEEIMETVLGRRSNYIIGM YGPKP
Sbjct: 107 MITLKANHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKP 147

BLAST of MC05g_new0158 vs. NCBI nr
Match: KAG5572499.1 (hypothetical protein H5410_062265 [Solanum commersonii])

HSP 1 Score: 52.0 bits (123), Expect = 8.08e-06
Identity = 28/72 (38.89%), Postives = 44/72 (61.11%), Query Frame = 0

Query: 1  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMRYGPKPTRNKGSSSKYSDEYVESLE 60
          MI LKA + S     T +EI++ +LG++S YI G+ YGPKP  N+ +  + ++     LE
Sbjct: 1  MIDLKALYTSGESSMTIDEIVDAILGKKSGYIKGLGYGPKPNTNRATQRRTAE-----LE 60

Query: 61 ARLQKHEEELAT 72
            L+K +EE A+
Sbjct: 61 DSLRKTKEEAAS 67

BLAST of MC05g_new0158 vs. NCBI nr
Match: KAG5576495.1 (hypothetical protein H5410_056629 [Solanum commersonii])

HSP 1 Score: 52.4 bits (124), Expect = 2.56e-05
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 0

Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMRYGPKPTRNKGSSSKYSDEYVESLE 60
           MI LKA + S     T +EI++ +LG++S YI G+ YGPKP  N+ +  + + E  +SLE
Sbjct: 152 MIDLKALYTSGESSMTIDEIVDAILGKKSGYIKGLGYGPKPNTNRATQRR-TTELEDSLE 211

Query: 61  ARLQK 65
            R +K
Sbjct: 212 RRRRK 215

BLAST of MC05g_new0158 vs. ExPASy TrEMBL
Match: A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1)

HSP 1 Score: 155 bits (391), Expect = 2.10e-45
Identity = 82/101 (81.19%), Postives = 87/101 (86.14%), Query Frame = 0

Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMRYGPKPTRNKGSSSKYSDEYVESLE 60
           MITLKAYHASQGDEKTEEEIMETVLG+RSNY+IGM YGPKPTRNKGSSSKYSDEYVESLE
Sbjct: 107 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLE 166

Query: 61  ARLQKHEEELATQRKANEDQQIATQEQIQKAFEAQSQEFSK 101
           ARLQKHEEE+A            TQEQIQKA EAQSQEF++
Sbjct: 167 ARLQKHEEEMAR----------TTQEQIQKALEAQSQEFNR 197

BLAST of MC05g_new0158 vs. ExPASy TrEMBL
Match: A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1)

HSP 1 Score: 155 bits (391), Expect = 6.28e-45
Identity = 82/101 (81.19%), Postives = 87/101 (86.14%), Query Frame = 0

Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMRYGPKPTRNKGSSSKYSDEYVESLE 60
           MITLKAYHASQGDEKTEEEIMETVLG+RSNY+IGM YGPKPTRNKGSSSKYSDEYVESLE
Sbjct: 112 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLE 171

Query: 61  ARLQKHEEELATQRKANEDQQIATQEQIQKAFEAQSQEFSK 101
           ARLQKHEEE+A            TQEQIQKA EAQSQEF++
Sbjct: 172 ARLQKHEEEMAR----------TTQEQIQKALEAQSQEFNR 202

BLAST of MC05g_new0158 vs. ExPASy TrEMBL
Match: A0A6J1DLF1 (uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021138 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.63e-17
Identity = 39/41 (95.12%), Postives = 39/41 (95.12%), Query Frame = 0

Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMRYGPKP 41
           MITLKA HASQGDEKTEEEIMETVLGRRSNYIIGM YGPKP
Sbjct: 107 MITLKANHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKP 147

BLAST of MC05g_new0158 vs. ExPASy TrEMBL
Match: M1DNT9 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.81e-06
Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 0

Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMRYGPKPTRNKGSSSKYSDEYVESLE 60
           MI LKA + S     T +EI++ +LG++S YI G+ YGPKP  N+ +  + ++     LE
Sbjct: 122 MIDLKALYTSGESSMTIDEIVDAILGKKSGYIKGLGYGPKPNTNRATQRRIAE-----LE 181

Query: 61  ARLQKHEEELAT 72
             LQK +EE A+
Sbjct: 182 DSLQKMKEEAAS 188

BLAST of MC05g_new0158 vs. ExPASy TrEMBL
Match: M0ZKV8 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.69e-05
Identity = 28/72 (38.89%), Postives = 44/72 (61.11%), Query Frame = 0

Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIGMRYGPKPTRNKGSSSKYSDEYVESLE 60
           MI LKA + S     T ++I++ +LG++  YI G+RYGPKP  N+ +  + ++     LE
Sbjct: 192 MIDLKALYTSGESSMTIDKIVDAILGKKLGYIKGLRYGPKPNTNRATQRRTTE-----LE 251

Query: 61  ARLQKHEEELAT 72
             LQK +EE A+
Sbjct: 252 DSLQKTKEEAAS 258

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022143616.14.33e-4581.19uncharacterized protein LOC111013476 [Momordica charantia][more]
XP_022148911.11.30e-4481.19uncharacterized protein LOC111017461 [Momordica charantia][more]
XP_022153681.15.44e-1795.12uncharacterized protein LOC111021138 [Momordica charantia][more]
KAG5572499.18.08e-0638.89hypothetical protein H5410_062265 [Solanum commersonii][more]
KAG5576495.12.56e-0541.54hypothetical protein H5410_056629 [Solanum commersonii][more]
Match NameE-valueIdentityDescription
A0A6J1CQT52.10e-4581.19uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1D6S96.28e-4581.19uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1DLF12.63e-1795.12uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
M1DNT93.81e-0640.28Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1[more]
M0ZKV81.69e-0538.89Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g_new0158.1MC05g_new0158.1mRNA