MC05g_new0154 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g_new0154
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC05: 8449839 .. 8450823 (+)
RNA-Seq ExpressionMC05g_new0154
SyntenyMC05g_new0154
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCATTGGAGTAGAACTTTCTCACCGTCACACGGCTGAACGAAAAAATAAGATCAAGCTGGCGGAAGTCACCAAGAAGGCTAAAGCCTGCTCCGCCCGGTTGGCCGACTACAACACCTTATTAGAAGAACTCAAGAAAGAACAGGAAACTCTAGCCAAGGAGAAGGAAGAGTTCAGAGAGCCTCAACATTCTTGCTGCATCAGATAAATGCATTATTGAGAACAACAAGTACAAGGATGAACATACCAGGTTGGAAGAAGAAATTCTTTGGCTGCAAGCCGCGAACTTCGAGCTGAAGGCTGAAGCCAACCAGGTCGGGCCTCTCATTATTCAATTGAAGAATGAGCTTGCTGAGTTGAAGACCTCTAGAGGAAATATTCTAAAAGCGGGGGTCGAAAAGAGAAGGTCGCTCGAAACCAAATTGGCTTATTTAAAGACTTCAACTGAGGAGACGTTGAGTGTTGCGATTAAAAAGAGAGATCTTGTCGTGGCCGAGCTAGTTGACACAAAATTGAAACTCGGCCAAATTGAATTACACTTGGCCGACATTGAATACAAATTTCGCGAGTCCGAGAAAGTAGTCGCCGAGTCCGTATCAAAGCTTGCAGATACCGAATTCAGACTTACCAATACTGAGGCTAGACTTGGCAATTTCGACCTTCTTTACGAGGTCATGTCTCAATTCCCTGACTTCAAGGAGCTAGAAAGGGATTTGGAGTACAGTGGTCTGGAATATGCAGTCGAATGGCTAAGAAGCTTTACTCAGGAAGTTGACTCTGACCAGCTCATTTCTGTGTTTAATCGGGATTGGGAGTTAGCCATGAAGAAAACATCTGATCCATCAGCTAAATCAGTCTCAGAGAATGAAATGGGCGCTCCACTTTCAACTGGGGCTATCGATTTAGAGCCCAAGGTCGGAACTAATGTCGAGGTCGGGGCATTTGACAACGCTGCTCCTGATCCATCGACAGTTGCATAA

mRNA sequence

ATGGCTTCCATTGGAGTAGAACTTTCTCACCGTCACACGGCTGAACGAAAAAATAAGATCAAGCTGGCGGAAGTCACCAAGAAGGCTAAAGCCTGCTCCGCCCGGTTGGCCGACTACAACACCTTATTAGAAGAACTCAAGAAAGAACAGGAAACTCTAGCCAAGGAGAAGGAAGAGTTGGAAGAAGAAATTCTTTGGCTGCAAGCCGCGAACTTCGAGCTGAAGGCTGAAGCCAACCAGGTCGGGCCTCTCATTATTCAATTGAAGAATGAGCTTGCTGAGTTGAAGACCTCTAGAGGAAATATTCTAAAAGCGGGGGTCGAAAAGAGAAGGTCGCTCGAAACCAAATTGGCTTATTTAAAGACTTCAACTGAGGAGACGTTGAGTGTTGCGATTAAAAAGAGAGATCTTGTCGTGGCCGAGCTAGTTGACACAAAATTGAAACTCGGCCAAATTGAATTACACTTGGCCGACATTGAATACAAATTTCGCGAGTCCGAGAAAGTAGTCGCCGAGTCCGTATCAAAGCTTGCAGATACCGAATTCAGACTTACCAATACTGAGGCTAGACTTGGCAATTTCGACCTTCTTTACGAGGTCATGTCTCAATTCCCTGACTTCAAGGAGCTAGAAAGGGATTTGGAGTACAGTGGTCTGGAATATGCAGTCGAATGGCTAAGAAGCTTTACTCAGGAAGTTGACTCTGACCAGCTCATTTCTGTGTTTAATCGGGATTGGGAGTTAGCCATGAAGAAAACATCTGATCCATCAGCTAAATCAGTCTCAGAGAATGAAATGGGCGCTCCACTTTCAACTGGGGCTATCGATTTAGAGCCCAAGGTCGGAACTAATGTCGAGGTCGGGGCATTTGACAACGCTGCTCCTGATCCATCGACAGTTGCATAA

Coding sequence (CDS)

ATGGCTTCCATTGGAGTAGAACTTTCTCACCGTCACACGGCTGAACGAAAAAATAAGATCAAGCTGGCGGAAGTCACCAAGAAGGCTAAAGCCTGCTCCGCCCGGTTGGCCGACTACAACACCTTATTAGAAGAACTCAAGAAAGAACAGGAAACTCTAGCCAAGGAGAAGGAAGAGTTGGAAGAAGAAATTCTTTGGCTGCAAGCCGCGAACTTCGAGCTGAAGGCTGAAGCCAACCAGGTCGGGCCTCTCATTATTCAATTGAAGAATGAGCTTGCTGAGTTGAAGACCTCTAGAGGAAATATTCTAAAAGCGGGGGTCGAAAAGAGAAGGTCGCTCGAAACCAAATTGGCTTATTTAAAGACTTCAACTGAGGAGACGTTGAGTGTTGCGATTAAAAAGAGAGATCTTGTCGTGGCCGAGCTAGTTGACACAAAATTGAAACTCGGCCAAATTGAATTACACTTGGCCGACATTGAATACAAATTTCGCGAGTCCGAGAAAGTAGTCGCCGAGTCCGTATCAAAGCTTGCAGATACCGAATTCAGACTTACCAATACTGAGGCTAGACTTGGCAATTTCGACCTTCTTTACGAGGTCATGTCTCAATTCCCTGACTTCAAGGAGCTAGAAAGGGATTTGGAGTACAGTGGTCTGGAATATGCAGTCGAATGGCTAAGAAGCTTTACTCAGGAAGTTGACTCTGACCAGCTCATTTCTGTGTTTAATCGGGATTGGGAGTTAGCCATGAAGAAAACATCTGATCCATCAGCTAAATCAGTCTCAGAGAATGAAATGGGCGCTCCACTTTCAACTGGGGCTATCGATTTAGAGCCCAAGGTCGGAACTAATGTCGAGGTCGGGGCATTTGACAACGCTGCTCCTGATCCATCGACAGTTGCATAA

Protein sequence

MASIGVELSHRHTAERKNKIKLAEVTKKAKACSARLADYNTLLEELKKEQETLAKEKEELEEEILWLQAANFELKAEANQVGPLIIQLKNELAELKTSRGNILKAGVEKRRSLETKLAYLKTSTEETLSVAIKKRDLVVAELVDTKLKLGQIELHLADIEYKFRESEKVVAESVSKLADTEFRLTNTEARLGNFDLLYEVMSQFPDFKELERDLEYSGLEYAVEWLRSFTQEVDSDQLISVFNRDWELAMKKTSDPSAKSVSENEMGAPLSTGAIDLEPKVGTNVEVGAFDNAAPDPSTVA
Homology
[Close]
BLAST of MC05g_new0154 vs. NCBI nr
Match: GET87512.1 (kinesin, putative [Leishmania tarentolae])

HSP 1 Score: 54.7 bits (130), Expect = 3.92e-04
Identity = 56/177 (31.64%), Postives = 83/177 (46.89%), Query Frame = 0 

Query: 21   KLAEVTKKAKACSARLADYNTLLEE----LKKEQETLAKEKEELEEEILWLQAANFELKA 80
            KLAE  +K +  SA+LAD    L+E    L   +ETL +   +L E    LQ  N +++ 
Sbjct: 876  KLAETEEKLQETSAKLADTEEALQETNAKLGDTEETLQETSAKLAETEETLQETNAKVED 935

Query: 81   EANQVGPLIIQLKNELAELKTSRGNILKAGVEKRRSLETKLAYLKTSTEETLSVAIKKRD 140
               ++     +L  E  E        L    EK +    KLA     TEETL     K +
Sbjct: 936  TVEKLQETSAKLA-ETEETVQETSAKLAETEEKLQETSAKLA----ETEETLQETNAKVE 995

Query: 141  LVVAELVDTKLKLGQIELHLADIEYKFRESEKVVAESVSKLADTEFRLTNTEARLGN 193
              V +L +T  KL + E  + +   K  E+E+ + E+ +KLADTE  L  T A+L +
Sbjct: 996  DTVEKLQETSAKLAETEETVQETSAKLAETEETLQETSAKLADTEETLQETSAKLAD 1047

[Close]
BLAST of MC05g_new0154 vs. ExPASy TrEMBL
Match: A0A640KDL1 (Kinesin, putative OS=Leishmania tarentolae OX=5689 GN=LtaPh_1615121 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.90e-04
Identity = 56/177 (31.64%), Postives = 83/177 (46.89%), Query Frame = 0 

Query: 21   KLAEVTKKAKACSARLADYNTLLEE----LKKEQETLAKEKEELEEEILWLQAANFELKA 80
            KLAE  +K +  SA+LAD    L+E    L   +ETL +   +L E    LQ  N +++ 
Sbjct: 876  KLAETEEKLQETSAKLADTEEALQETNAKLGDTEETLQETSAKLAETEETLQETNAKVED 935

Query: 81   EANQVGPLIIQLKNELAELKTSRGNILKAGVEKRRSLETKLAYLKTSTEETLSVAIKKRD 140
               ++     +L  E  E        L    EK +    KLA     TEETL     K +
Sbjct: 936  TVEKLQETSAKLA-ETEETVQETSAKLAETEEKLQETSAKLA----ETEETLQETNAKVE 995

Query: 141  LVVAELVDTKLKLGQIELHLADIEYKFRESEKVVAESVSKLADTEFRLTNTEARLGN 193
              V +L +T  KL + E  + +   K  E+E+ + E+ +KLADTE  L  T A+L +
Sbjct: 996  DTVEKLQETSAKLAETEETVQETSAKLAETEETLQETSAKLADTEETLQETSAKLAD 1047

The following BLAST results are available for this feature:
BLAST of MC05g_new0154 vs.
Match NameE-valueIdentityDescription
BLAST of MC05g_new0154 vs. NCBI nr
Match NameE-valueIdentityDescription
GET87512.13.92e-0431.64kinesin, putative [Leishmania tarentolae][more]
BLAST of MC05g_new0154 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A640KDL11.90e-0431.64Kinesin, putative OS=Leishmania tarentolae OX=5689 GN=LtaPh_1615121 PE=4 SV=1[more]
BLAST of MC05g_new0154 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..275

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g_new0154.1MC05g_new0154.1mRNA