MC05g_new0152 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g_new0152
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC05: 8448488 .. 8449221 (+)
RNA-Seq Expression	MC05g_new0152
Synteny	MC05g_new0152

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGTAATGGAGAAAGACTTTTTTTTATTGTAAACGGTCCCACCTCCACAAAGAACTGGAAACAGAGGTGGTTCTATGTTTTAAGGAACTGGTTAATGACGACCAGCGAAGGGGTTACTTATTGTGAGGTGCCAGTGGAATTCGATAGATTGAGTAAGTCTTTGTCTGAGGAGCTCTTCATTTTTCATCACAACCGGGCACTTATTTTAACCAATTTCTTGTCTTCGCAGTTTTGGTCGACCCTCCACCTGAGTTGACAAAAGAGACCACGTCAGTTCTGACCAGCTATGCAACTCTTTCAGCTAGGGAACGTTATAGCCATGACCTCTTGTCCAATCATAATTTGAGGAACTGTGGGCTCGCAGCTGAACTCACGGAAGGTTATTAATCTTCCTGTCTTTCTCTTTTATTTTTTACTTGTCGAAGTTTTCATAAACTGAATTCCAATTCTTGTGTAGAAGAAATGAACCCTCGTCCATCCAAGTTTAACAGCAGTTGTCGCCACAAAGTCCCGCTGGGAATGGGTTCAACTAGCTCTGCAGCGGGAGAAGAGGTGGCTTCAAACTCTTCTCCTGTAAAGGGAAAGCAAAAAGGTGTCCGTGCTACACAGCCTCAATTTGTGCCCGCAGTCAGGTTTGCGGGGTCTGAGCAACTTCGTCCTCCTTTACCAAAGCCACCTCTTCGGGGAAGACTTCAAAACGAAGACCTGCTTCCCCTCTCGTCGAGGTAA

mRNA sequence

ATGGGTTGTAATGGAGAAAGACTTTTTTTTATTGTAAACGGTCCCACCTCCACAAAGAACTGGAAACAGAGGTGGTTCTATGTTTTAAGGAACTGGTTAATGACGACCAGCGAAGGGGTTACTTATTGTGAGGTGCCAGTGGAATTCGATAGATTGATTTTGGTCGACCCTCCACCTGAGTTGACAAAAGAGACCACGTCAGTTCTGACCAGCTATGCAACTCTTTCAGCTAGGGAACGTTATAGCCATGACCTCTTGTCCAATCATAATTTGAGGAACTGTGGGCTCGCAGCTGAACTCACGGAAGAAGAAATGAACCCTCGTCCATCCAAGTTTAACAGCAGTTGTCGCCACAAAGTCCCGCTGGGAATGGGTTCAACTAGCTCTGCAGCGGGAGAAGAGGTGGCTTCAAACTCTTCTCCTGTAAAGGGAAAGCAAAAAGGTGTCCGTGCTACACAGCCTCAATTTGTGCCCGCAGTCAGGTTTGCGGGGTCTGAGCAACTTCGTCCTCCTTTACCAAAGCCACCTCTTCGGGGAAGACTTCAAAACGAAGACCTGCTTCCCCTCTCGTCGAGGTAA

Coding sequence (CDS)

ATGGGTTGTAATGGAGAAAGACTTTTTTTTATTGTAAACGGTCCCACCTCCACAAAGAACTGGAAACAGAGGTGGTTCTATGTTTTAAGGAACTGGTTAATGACGACCAGCGAAGGGGTTACTTATTGTGAGGTGCCAGTGGAATTCGATAGATTGATTTTGGTCGACCCTCCACCTGAGTTGACAAAAGAGACCACGTCAGTTCTGACCAGCTATGCAACTCTTTCAGCTAGGGAACGTTATAGCCATGACCTCTTGTCCAATCATAATTTGAGGAACTGTGGGCTCGCAGCTGAACTCACGGAAGAAGAAATGAACCCTCGTCCATCCAAGTTTAACAGCAGTTGTCGCCACAAAGTCCCGCTGGGAATGGGTTCAACTAGCTCTGCAGCGGGAGAAGAGGTGGCTTCAAACTCTTCTCCTGTAAAGGGAAAGCAAAAAGGTGTCCGTGCTACACAGCCTCAATTTGTGCCCGCAGTCAGGTTTGCGGGGTCTGAGCAACTTCGTCCTCCTTTACCAAAGCCACCTCTTCGGGGAAGACTTCAAAACGAAGACCTGCTTCCCCTCTCGTCGAGGTAA

Protein sequence

MGCNGERLFFIVNGPTSTKNWKQRWFYVLRNWLMTTSEGVTYCEVPVEFDRLILVDPPPELTKETTSVLTSYATLSARERYSHDLLSNHNLRNCGLAAELTEEEMNPRPSKFNSSCRHKVPLGMGSTSSAAGEEVASNSSPVKGKQKGVRATQPQFVPAVRFAGSEQLRPPLPKPPLRGRLQNEDLLPLSSR

Homology

[Close]

BLAST of MC05g_new0152 vs. NCBI nr
Match: XP_022156270.1 (uncharacterized protein LOC111023202 [Momordica charantia])

HSP 1 Score: 63.2 bits (152), Expect = 4.76e-09
Identity = 39/114 (34.21%), Postives = 52/114 (45.61%), Query Frame = 0


Query: 11  IVNGPTSTKNWKQRWFYVLRNWLMTTSEGVTYCEVPVEFDRLILVDPPPELTKETTSVLT 70
           IV GPTS K W ++WFY    WL     G ++ +VP  F  L+ + P PELT+ +   L 
Sbjct: 10  IVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTXFGNLVSIRPVPELTQASFDTLK 69

Query: 71  SYATLSARERYSHDLLSNHNLRNCGLAAELTEEEMNPRPSKFNSSCRHKVPLGM 124
            Y     R R    L+++  L   GL       + NP      SS R    LGM
Sbjct: 70  YYKERFPRGRKVGTLVTDELLLESGLL------DYNPAVXPIESS-RPNSELGM 116

[Close]

BLAST of MC05g_new0152 vs. NCBI nr
Match: XP_022154929.1 (uncharacterized protein LOC111022075 [Momordica charantia])

HSP 1 Score: 63.2 bits (152), Expect = 2.35e-08
Identity = 45/138 (32.61%), Postives = 59/138 (42.75%), Query Frame = 0


Query: 11  IVNGPTSTKNWKQRWFYVLRNWLMTTSEGVTYCEVPVEFDRLILVDPPPELTKETTSVLT 70
           IV GPTS K W ++WFY    WL     G ++ +VP  F  L+ + P PELT+ +   L 
Sbjct: 10  IVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNLVSIRPVPELTQASFDTLK 69

Query: 71  SYATLSARERYSHDLLSNHNLRNCGLAAELTEEEMNPRPSKFNSSCRHKVPLGMGSTSSA 130
            Y     R R    L+++  L   GL       + NP      SS R    L M      
Sbjct: 70  YYKERFPRGRKVGTLVTDELLLESGLL------DYNPAVRXIESS-RPNSELAM------ 129

Query: 131 AGEEVASNSSPVKGKQKG 148
               V   +S VK K KG
Sbjct: 130 ----VCGFASSVKRKSKG 130

[Close]

BLAST of MC05g_new0152 vs. NCBI nr
Match: XP_022158650.1 (uncharacterized protein LOC111025108 [Momordica charantia])

HSP 1 Score: 62.8 bits (151), Expect = 3.00e-08
Identity = 39/114 (34.21%), Postives = 52/114 (45.61%), Query Frame = 0


Query: 11  IVNGPTSTKNWKQRWFYVLRNWLMTTSEGVTYCEVPVEFDRLILVDPPPELTKETTSVLT 70
           IV GPTS K W ++WFY    WL     G ++ +VP  F  L+ + P PELT+ +   L 
Sbjct: 88  IVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNLVSIRPVPELTQASFDTLK 147

Query: 71  SYATLSARERYSHDLLSNHNLRNCGLAAELTEEEMNPRPSKFNSSCRHKVPLGM 124
            Y     R R    L+++  L   GL       + NP      SS R    LGM
Sbjct: 148 YYKEHFPRGRKVGTLVTDKLLLESGLL------DYNPAVRPIESS-RPNSELGM 194

[Close]

BLAST of MC05g_new0152 vs. NCBI nr
Match: XP_022158122.1 (uncharacterized protein LOC111024680 [Momordica charantia])

HSP 1 Score: 62.4 bits (150), Expect = 3.60e-08
Identity = 31/86 (36.05%), Postives = 43/86 (50.00%), Query Frame = 0


Query: 11  IVNGPTSTKNWKQRWFYVLRNWLMTTSEGVTYCEVPVEFDRLILVDPPPELTKETTSVLT 70
           IV GPTS K W ++WFY    WL     G ++ +VP  F  L+ + P PELT+ +   L 
Sbjct: 88  IVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNLVSIRPVPELTQASFDTLK 147

Query: 71  SYATLSARERYSHDLLSNHNLRNCGL 96
            Y     R R    L+++  L   GL
Sbjct: 148 YYKERFPRGRKVGTLVTDELLLESGL 173

[Close]

BLAST of MC05g_new0152 vs. NCBI nr
Match: XP_022144034.1 (uncharacterized protein LOC111013826 [Momordica charantia])

HSP 1 Score: 62.4 bits (150), Expect = 8.86e-08
Identity = 31/86 (36.05%), Postives = 43/86 (50.00%), Query Frame = 0


Query: 11  IVNGPTSTKNWKQRWFYVLRNWLMTTSEGVTYCEVPVEFDRLILVDPPPELTKETTSVLT 70
           IV GPTS K W ++WFY    WL     G ++ +VP  F  L+ + P PELT+ +   L 
Sbjct: 88  IVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNLVSIRPVPELTQASFDTLK 147

Query: 71  SYATLSARERYSHDLLSNHNLRNCGL 96
            Y     R R    L+++  L   GL
Sbjct: 148 YYKERFPRGRKVGTLVTDELLLESGL 173

[Close]

BLAST of MC05g_new0152 vs. ExPASy TrEMBL
Match: A0A6J1DPT7 (uncharacterized protein LOC111023202 OS=Momordica charantia OX=3673 GN=LOC111023202 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.31e-09
Identity = 39/114 (34.21%), Postives = 52/114 (45.61%), Query Frame = 0


Query: 11  IVNGPTSTKNWKQRWFYVLRNWLMTTSEGVTYCEVPVEFDRLILVDPPPELTKETTSVLT 70
           IV GPTS K W ++WFY    WL     G ++ +VP  F  L+ + P PELT+ +   L 
Sbjct: 10  IVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTXFGNLVSIRPVPELTQASFDTLK 69

Query: 71  SYATLSARERYSHDLLSNHNLRNCGLAAELTEEEMNPRPSKFNSSCRHKVPLGM 124
            Y     R R    L+++  L   GL       + NP      SS R    LGM
Sbjct: 70  YYKERFPRGRKVGTLVTDELLLESGLL------DYNPAVXPIESS-RPNSELGM 116

[Close]

BLAST of MC05g_new0152 vs. ExPASy TrEMBL
Match: A0A6J1DNQ5 (uncharacterized protein LOC111022075 OS=Momordica charantia OX=3673 GN=LOC111022075 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.14e-08
Identity = 45/138 (32.61%), Postives = 59/138 (42.75%), Query Frame = 0


Query: 11  IVNGPTSTKNWKQRWFYVLRNWLMTTSEGVTYCEVPVEFDRLILVDPPPELTKETTSVLT 70
           IV GPTS K W ++WFY    WL     G ++ +VP  F  L+ + P PELT+ +   L 
Sbjct: 10  IVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNLVSIRPVPELTQASFDTLK 69

Query: 71  SYATLSARERYSHDLLSNHNLRNCGLAAELTEEEMNPRPSKFNSSCRHKVPLGMGSTSSA 130
            Y     R R    L+++  L   GL       + NP      SS R    L M      
Sbjct: 70  YYKERFPRGRKVGTLVTDELLLESGLL------DYNPAVRXIESS-RPNSELAM------ 129

Query: 131 AGEEVASNSSPVKGKQKG 148
               V   +S VK K KG
Sbjct: 130 ----VCGFASSVKRKSKG 130

[Close]

BLAST of MC05g_new0152 vs. ExPASy TrEMBL
Match: A0A6J1DWF1 (uncharacterized protein LOC111025108 OS=Momordica charantia OX=3673 GN=LOC111025108 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.45e-08
Identity = 39/114 (34.21%), Postives = 52/114 (45.61%), Query Frame = 0


Query: 11  IVNGPTSTKNWKQRWFYVLRNWLMTTSEGVTYCEVPVEFDRLILVDPPPELTKETTSVLT 70
           IV GPTS K W ++WFY    WL     G ++ +VP  F  L+ + P PELT+ +   L 
Sbjct: 88  IVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNLVSIRPVPELTQASFDTLK 147

Query: 71  SYATLSARERYSHDLLSNHNLRNCGLAAELTEEEMNPRPSKFNSSCRHKVPLGM 124
            Y     R R    L+++  L   GL       + NP      SS R    LGM
Sbjct: 148 YYKEHFPRGRKVGTLVTDKLLLESGLL------DYNPAVRPIESS-RPNSELGM 194

[Close]

BLAST of MC05g_new0152 vs. ExPASy TrEMBL
Match: A0A6J1DWD2 (uncharacterized protein LOC111024680 OS=Momordica charantia OX=3673 GN=LOC111024680 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.74e-08
Identity = 31/86 (36.05%), Postives = 43/86 (50.00%), Query Frame = 0


Query: 11  IVNGPTSTKNWKQRWFYVLRNWLMTTSEGVTYCEVPVEFDRLILVDPPPELTKETTSVLT 70
           IV GPTS K W ++WFY    WL     G ++ +VP  F  L+ + P PELT+ +   L 
Sbjct: 88  IVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNLVSIRPVPELTQASFDTLK 147

Query: 71  SYATLSARERYSHDLLSNHNLRNCGL 96
            Y     R R    L+++  L   GL
Sbjct: 148 YYKERFPRGRKVGTLVTDELLLESGL 173

[Close]

BLAST of MC05g_new0152 vs. ExPASy TrEMBL
Match: A0A6J1CR42 (uncharacterized protein LOC111013826 OS=Momordica charantia OX=3673 GN=LOC111013826 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.29e-08
Identity = 31/86 (36.05%), Postives = 43/86 (50.00%), Query Frame = 0


Query: 11  IVNGPTSTKNWKQRWFYVLRNWLMTTSEGVTYCEVPVEFDRLILVDPPPELTKETTSVLT 70
           IV GPTS K W ++WFY    WL     G ++ +VP  F  L+ + P PELT+ +   L 
Sbjct: 88  IVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNLVSIRPVPELTQASFDTLK 147

Query: 71  SYATLSARERYSHDLLSNHNLRNCGL 96
            Y     R R    L+++  L   GL
Sbjct: 148 YYKERFPRGRKVGTLVTDELLLESGL 173

The following BLAST results are available for this feature:

BLAST of MC05g_new0152 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g_new0152 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156270.1	4.76e-09	34.21	uncharacterized protein LOC111023202 [Momordica charantia]	[more]
XP_022154929.1	2.35e-08	32.61	uncharacterized protein LOC111022075 [Momordica charantia]	[more]
XP_022158650.1	3.00e-08	34.21	uncharacterized protein LOC111025108 [Momordica charantia]	[more]
XP_022158122.1	3.60e-08	36.05	uncharacterized protein LOC111024680 [Momordica charantia]	[more]
XP_022144034.1	8.86e-08	36.05	uncharacterized protein LOC111013826 [Momordica charantia]	[more]

BLAST of MC05g_new0152 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPT7	2.31e-09	34.21	uncharacterized protein LOC111023202 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DNQ5	1.14e-08	32.61	uncharacterized protein LOC111022075 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DWF1	1.45e-08	34.21	uncharacterized protein LOC111025108 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DWD2	1.74e-08	36.05	uncharacterized protein LOC111024680 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1CR42	4.29e-08	36.05	uncharacterized protein LOC111013826 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of MC05g_new0152 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g_new0152.1	MC05g_new0152.1	mRNA