Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTATAGATGGCAAAGAGGGTTGGTTCACAGGGGTATATGGCCCTTCTTCCACTAGGGGTAGATTCGAGTTTTGGAGGGAGCTGGAAGATTTGGCAGGATTATGTCAGGGGGCGGTGCATTGGGGGAGATTTTAACGTGGCTAGATGGCTCACGGAGAAGGCTAGTAGCGTTGGTAGTAGAATCACTCGAAGCATGAAAGAGTTCAGTGCTCTAATAGTAGACTTGAATTTGAGGGACCCTCCTTTCGACAATGGCATCTTTACGTGGTCTAATATGAGAACTGCCCCCACTCTTTCCAGGTTAGATCGTTTCTTATGTACTAAAGATTGGATGAATGTTTTTGCAGATCAACGAGCCACTAGACTTGTTCGCACAACTTCTGACCACTTCCCAATTCAATTGGCAAATGAGGCTATCAAATGGGGGCCTACTCCTTTCAGATTTGAGAATGCATCGTTGGACTCTCCTCAACTGATCCCTCTGGTAGAAAACTGGTGGAAGGATAATCCATTGAGAGGATGGTTTAGTTATGGCTTCATGGAAAAACTGAAGGGTTTGAAGGGCATCCTTGTCCAATGGAACATAGATGTTCTTGGAAATGTGGGGAAAAAAAGGCAGAGTTTTCGAAAGCTATAGAGGCTCTTGACAAAAAGGAGAAAATGTGTACACTTATGGCTGAAGACGTCATATAAAGAACTAAACTAAAGGAGCAGCTTGTAGAGACGATTATTATTGAACAACGAATGTGGG
mRNA sequence
ATGGCAAAGAGGGTTGGTTCACAGGGGTATATGGCCCTTCTTCCACTAGGGGTAGATTCGAGTTTTGGAGGGAGCTGGAAGATTTGGCAGGATTATGTCAGGGGGCGGTGCATTGGGGGAGATTTTAACGTGGCTAGATGGCTCACGGAGAAGGCTAGTAGCGTTGGTAGTAGAATCACTCGAAGCATGAAAGAGTTCAGTGCTCTAATAGTAGACTTGAATTTGAGGGACCCTCCTTTCGACAATGGCATCTTTACGTGGTCTAATATGAGAACTGCCCCCACTCTTTCCAGGTTAGATCGTTTCTTATGTACTAAAGATTGGATGAATGTTTTTGCAGATCAACGAGCCACTAGACTTGTTCGCACAACTTCTGACCACTTCCCAATTCAATTGGCAAATGAGGCTATCAAATGGGGGCCTACTCCTTTCAGATTTGAGAATGCATCGTTGGACTCTCCTCAACTGATCCCTCTGGTAGAAAACTGGTGGAAGGATAATCCATTGAGAGGATGGTTTAGTTATGGCTTCATGGAAAAACTGAAGGGTTTGAAGGGCATCCTTGTCCAATGGAACATAGATGTTCTTGGAAATGTGGGGAAAAAAAGGCAGAGTTTTCGAAAGCTATAG
Coding sequence (CDS)
ATGGCAAAGAGGGTTGGTTCACAGGGGTATATGGCCCTTCTTCCACTAGGGGTAGATTCGAGTTTTGGAGGGAGCTGGAAGATTTGGCAGGATTATGTCAGGGGGCGGTGCATTGGGGGAGATTTTAACGTGGCTAGATGGCTCACGGAGAAGGCTAGTAGCGTTGGTAGTAGAATCACTCGAAGCATGAAAGAGTTCAGTGCTCTAATAGTAGACTTGAATTTGAGGGACCCTCCTTTCGACAATGGCATCTTTACGTGGTCTAATATGAGAACTGCCCCCACTCTTTCCAGGTTAGATCGTTTCTTATGTACTAAAGATTGGATGAATGTTTTTGCAGATCAACGAGCCACTAGACTTGTTCGCACAACTTCTGACCACTTCCCAATTCAATTGGCAAATGAGGCTATCAAATGGGGGCCTACTCCTTTCAGATTTGAGAATGCATCGTTGGACTCTCCTCAACTGATCCCTCTGGTAGAAAACTGGTGGAAGGATAATCCATTGAGAGGATGGTTTAGTTATGGCTTCATGGAAAAACTGAAGGGTTTGAAGGGCATCCTTGTCCAATGGAACATAGATGTTCTTGGAAATGTGGGGAAAAAAAGGCAGAGTTTTCGAAAGCTATAG
Protein sequence
MAKRVGSQGYMALLPLGVDSSFGGSWKIWQDYVRGRCIGGDFNVARWLTEKASSVGSRITRSMKEFSALIVDLNLRDPPFDNGIFTWSNMRTAPTLSRLDRFLCTKDWMNVFADQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQLIPLVENWWKDNPLRGWFSYGFMEKLKGLKGILVQWNIDVLGNVGKKRQSFRKL
Homology
BLAST of MC05g_new0144 vs. NCBI nr
Match:
XP_022145822.1 (uncharacterized protein LOC111015182 [Momordica charantia])
HSP 1 Score: 206 bits (525), Expect = 2.72e-65
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
Query: 114 DQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQLIPLVENWWKDNPLRGWF 173
DQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQLIPLVENWWKDNPLRGWF
Sbjct: 6 DQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQLIPLVENWWKDNPLRGWF 65
Query: 174 SYGFMEKLKGLKGILVQWNIDVLGNVGKKRQSFRKL 209
SYGFMEKLKGLKGILVQWNIDVLGNVGKKRQSFRKL
Sbjct: 66 SYGFMEKLKGLKGILVQWNIDVLGNVGKKRQSFRKL 101
BLAST of MC05g_new0144 vs. NCBI nr
Match:
XP_021820446.1 (uncharacterized protein LOC110762145 [Prunus avium])
HSP 1 Score: 155 bits (391), Expect = 3.72e-42
Identity = 77/168 (45.83%), Postives = 102/168 (60.71%), Query Frame = 0
Query: 37 CIGGDFNVARWLTEKASSVGSRITRSMKEFSALIVDLNLRDPPFDNGIFTWSNMRTAPTL 96
CIGGDFNV R++++K++ G +T SM+ F+ I D NLRDP N FTWSN R
Sbjct: 136 CIGGDFNVVRFVSDKSN--GGGVTSSMRTFNNFINDTNLRDPRLLNASFTWSNGRENVVC 195
Query: 97 SRLDRFLCTKDWMNVFADQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQL 156
RLDRFL T W + F + R LVR TSDH PI+L +KWGP PFRFEN L+ P
Sbjct: 196 RRLDRFLFTGGWEDCFPNFRQKALVRVTSDHCPIELDTSKLKWGPGPFRFENMWLEHPDF 255
Query: 157 IPLVENWWKDNPLRGWFSYGFMEKLKGLKGILVQWNIDVLGNVGKKRQ 204
++WW + L GW + FM +LK +KG L W+ +V G+V ++
Sbjct: 256 NRNFKDWWAEEHLIGWPGFNFMRRLKAVKGKLRVWSKEVFGDVAATKK 301
BLAST of MC05g_new0144 vs. NCBI nr
Match:
RVX05091.1 (hypothetical protein CK203_020182 [Vitis vinifera])
HSP 1 Score: 154 bits (389), Expect = 2.92e-39
Identity = 75/172 (43.60%), Postives = 99/172 (57.56%), Query Frame = 0
Query: 37 CIGGDFNVARWLTEKASSVGSRITRSMKEFSALIVDLNLRDPPFDNGIFTWSNMRTAPTL 96
C+GGDFNV R +EK GSR+T SM++F + I + L DPP N FTWSNM+ +P
Sbjct: 96 CVGGDFNVIRRSSEKLG--GSRLTSSMRDFDSFIRECELLDPPLRNASFTWSNMQESPVC 155
Query: 97 SRLDRFLCTKDWMNVFADQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQL 156
RLDRFL + +W +F L+R TSDH+PI L WGPTPFRFEN L P
Sbjct: 156 KRLDRFLYSNEWGQLFPQGIQETLIRRTSDHWPIALDTNPFMWGPTPFRFENMWLQHPSF 215
Query: 157 IPLVENWWKDNPLRGWFSYGFMEKLKGLKGILVQWNIDVLGNVGKKRQSFRK 208
NWW+ GW + FM +L+ +K L +WN G + +K++S K
Sbjct: 216 KENFRNWWRGFQGNGWEGHKFMRRLQFVKAKLKEWNKLSFGELNEKKKSILK 265
BLAST of MC05g_new0144 vs. NCBI nr
Match:
XP_019077787.1 (PREDICTED: uncharacterized protein LOC104880237 [Vitis vinifera] >XP_019077788.1 PREDICTED: uncharacterized protein LOC104880237 [Vitis vinifera] >XP_019077789.1 PREDICTED: uncharacterized protein LOC104880237 [Vitis vinifera] >XP_019077790.1 PREDICTED: uncharacterized protein LOC104880237 [Vitis vinifera])
HSP 1 Score: 147 bits (371), Expect = 5.39e-39
Identity = 73/169 (43.20%), Postives = 95/169 (56.21%), Query Frame = 0
Query: 37 CIGGDFNVARWLTEKASSVGSRITRSMKEFSALIVDLNLRDPPFDNGIFTWSNMRTAPTL 96
C+GGDFNV R +EK GSR T SM+EF I + L DPP N FTWSNM+ +P
Sbjct: 136 CVGGDFNVIRRSSEKLG--GSRFTSSMREFDGFIRESELHDPPLRNASFTWSNMQESPVC 195
Query: 97 SRLDRFLCTKDWMNVFADQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQL 156
RLDRFL + +W F L R TSDH+PI L KWGPTPFRFEN L
Sbjct: 196 KRLDRFLYSNEWELSFPQSLQEVLPRWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHHSF 255
Query: 157 IPLVENWWKDNPLRGWFSYGFMEKLKGLKGILVQWNIDVLGNVGKKRQS 205
+WW++ GW + FM KL+ +K L WN + G + +++++
Sbjct: 256 KECFSSWWREFEGNGWEGHKFMRKLQFVKAKLKDWNKNTFGMLKERKKT 302
BLAST of MC05g_new0144 vs. NCBI nr
Match:
RVW36761.1 (hypothetical protein CK203_101569 [Vitis vinifera])
HSP 1 Score: 147 bits (371), Expect = 9.21e-39
Identity = 74/169 (43.79%), Postives = 94/169 (55.62%), Query Frame = 0
Query: 37 CIGGDFNVARWLTEKASSVGSRITRSMKEFSALIVDLNLRDPPFDNGIFTWSNMRTAPTL 96
C+GGDFNV R +EK GSR+T SMK+F I D L D P + +TWSNM+ P
Sbjct: 72 CVGGDFNVIRRSSEKLG--GSRLTPSMKDFDDFIRDCELIDSPLRSASYTWSNMQENPVC 131
Query: 97 SRLDRFLCTKDWMNVFADQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQL 156
RLDRFL + +W VF L R TSDH+PI L KWGPTPF+FEN L P
Sbjct: 132 KRLDRFLYSNEWEQVFRQSLQGVLPRWTSDHWPIVLETNPFKWGPTPFKFENMWLQHPSF 191
Query: 157 IPLVENWWKDNPLRGWFSYGFMEKLKGLKGILVQWNIDVLGNVGKKRQS 205
WW++ GW + FM KL+ +K L +WN G + KK++
Sbjct: 192 KENFGRWWREFQGNGWEGHKFMRKLQFVKAKLKEWNKTSFGELSKKKKD 238
BLAST of MC05g_new0144 vs. ExPASy TrEMBL
Match:
A0A6J1CXT6 (uncharacterized protein LOC111015182 OS=Momordica charantia OX=3673 GN=LOC111015182 PE=4 SV=1)
HSP 1 Score: 206 bits (525), Expect = 1.31e-65
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
Query: 114 DQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQLIPLVENWWKDNPLRGWF 173
DQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQLIPLVENWWKDNPLRGWF
Sbjct: 6 DQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQLIPLVENWWKDNPLRGWF 65
Query: 174 SYGFMEKLKGLKGILVQWNIDVLGNVGKKRQSFRKL 209
SYGFMEKLKGLKGILVQWNIDVLGNVGKKRQSFRKL
Sbjct: 66 SYGFMEKLKGLKGILVQWNIDVLGNVGKKRQSFRKL 101
BLAST of MC05g_new0144 vs. ExPASy TrEMBL
Match:
A0A6P5T1U8 (uncharacterized protein LOC110762145 OS=Prunus avium OX=42229 GN=LOC110762145 PE=4 SV=1)
HSP 1 Score: 155 bits (391), Expect = 1.80e-42
Identity = 77/168 (45.83%), Postives = 102/168 (60.71%), Query Frame = 0
Query: 37 CIGGDFNVARWLTEKASSVGSRITRSMKEFSALIVDLNLRDPPFDNGIFTWSNMRTAPTL 96
CIGGDFNV R++++K++ G +T SM+ F+ I D NLRDP N FTWSN R
Sbjct: 136 CIGGDFNVVRFVSDKSN--GGGVTSSMRTFNNFINDTNLRDPRLLNASFTWSNGRENVVC 195
Query: 97 SRLDRFLCTKDWMNVFADQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQL 156
RLDRFL T W + F + R LVR TSDH PI+L +KWGP PFRFEN L+ P
Sbjct: 196 RRLDRFLFTGGWEDCFPNFRQKALVRVTSDHCPIELDTSKLKWGPGPFRFENMWLEHPDF 255
Query: 157 IPLVENWWKDNPLRGWFSYGFMEKLKGLKGILVQWNIDVLGNVGKKRQ 204
++WW + L GW + FM +LK +KG L W+ +V G+V ++
Sbjct: 256 NRNFKDWWAEEHLIGWPGFNFMRRLKAVKGKLRVWSKEVFGDVAATKK 301
BLAST of MC05g_new0144 vs. ExPASy TrEMBL
Match:
A0A438J819 (zf-RVT domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_020182 PE=4 SV=1)
HSP 1 Score: 154 bits (389), Expect = 1.41e-39
Identity = 75/172 (43.60%), Postives = 99/172 (57.56%), Query Frame = 0
Query: 37 CIGGDFNVARWLTEKASSVGSRITRSMKEFSALIVDLNLRDPPFDNGIFTWSNMRTAPTL 96
C+GGDFNV R +EK GSR+T SM++F + I + L DPP N FTWSNM+ +P
Sbjct: 96 CVGGDFNVIRRSSEKLG--GSRLTSSMRDFDSFIRECELLDPPLRNASFTWSNMQESPVC 155
Query: 97 SRLDRFLCTKDWMNVFADQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQL 156
RLDRFL + +W +F L+R TSDH+PI L WGPTPFRFEN L P
Sbjct: 156 KRLDRFLYSNEWGQLFPQGIQETLIRRTSDHWPIALDTNPFMWGPTPFRFENMWLQHPSF 215
Query: 157 IPLVENWWKDNPLRGWFSYGFMEKLKGLKGILVQWNIDVLGNVGKKRQSFRK 208
NWW+ GW + FM +L+ +K L +WN G + +K++S K
Sbjct: 216 KENFRNWWRGFQGNGWEGHKFMRRLQFVKAKLKEWNKLSFGELNEKKKSILK 265
BLAST of MC05g_new0144 vs. ExPASy TrEMBL
Match:
A0A438DMS8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_101569 PE=4 SV=1)
HSP 1 Score: 147 bits (371), Expect = 4.46e-39
Identity = 74/169 (43.79%), Postives = 94/169 (55.62%), Query Frame = 0
Query: 37 CIGGDFNVARWLTEKASSVGSRITRSMKEFSALIVDLNLRDPPFDNGIFTWSNMRTAPTL 96
C+GGDFNV R +EK GSR+T SMK+F I D L D P + +TWSNM+ P
Sbjct: 72 CVGGDFNVIRRSSEKLG--GSRLTPSMKDFDDFIRDCELIDSPLRSASYTWSNMQENPVC 131
Query: 97 SRLDRFLCTKDWMNVFADQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQL 156
RLDRFL + +W VF L R TSDH+PI L KWGPTPF+FEN L P
Sbjct: 132 KRLDRFLYSNEWEQVFRQSLQGVLPRWTSDHWPIVLETNPFKWGPTPFKFENMWLQHPSF 191
Query: 157 IPLVENWWKDNPLRGWFSYGFMEKLKGLKGILVQWNIDVLGNVGKKRQS 205
WW++ GW + FM KL+ +K L +WN G + KK++
Sbjct: 192 KENFGRWWREFQGNGWEGHKFMRKLQFVKAKLKEWNKTSFGELSKKKKD 238
BLAST of MC05g_new0144 vs. ExPASy TrEMBL
Match:
A5B9I8 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_012933 PE=4 SV=1)
HSP 1 Score: 153 bits (386), Expect = 4.56e-39
Identity = 74/172 (43.02%), Postives = 99/172 (57.56%), Query Frame = 0
Query: 37 CIGGDFNVARWLTEKASSVGSRITRSMKEFSALIVDLNLRDPPFDNGIFTWSNMRTAPTL 96
C+GGDFNV R +EK GSR+T SM++F + I + L DPP N FTWSNM+ +P
Sbjct: 805 CVGGDFNVIRRSSEKLG--GSRLTSSMRDFDSFIXESELLDPPLRNASFTWSNMQESPVC 864
Query: 97 SRLDRFLCTKDWMNVFADQRATRLVRTTSDHFPIQLANEAIKWGPTPFRFENASLDSPQL 156
RLDRFL + +W +F L+R TSDH+PI L WGPTPFRFEN L P
Sbjct: 865 KRLDRFLYSNEWGQLFPQGIQETLIRRTSDHWPIALDTNPFMWGPTPFRFENMWLQHPSF 924
Query: 157 IPLVENWWKDNPLRGWFSYGFMEKLKGLKGILVQWNIDVLGNVGKKRQSFRK 208
NWW+ GW + FM +L+ +K + +WN G + +K++S K
Sbjct: 925 KENFRNWWRGFQGNGWEGHKFMRRLQFVKAKVKEWNKLSFGXLNEKKKSILK 974
BLAST of MC05g_new0144 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 55.5 bits (132), Expect = 6.1e-08
Identity = 48/195 (24.62%), Postives = 77/195 (39.49%), Query Frame = 0
Query: 20 SSFGGSWKIWQDYV---------RGRCIGGDFNVARWLTEKASSVGSRI-TRSMKEFSAL 79
S G W +W V + + GDF+ ++ S + + I R ++EF
Sbjct: 196 SELGRIWIVWDPSVSVLVFKKTDQLMILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNC 255
Query: 80 IVDLNLRDPPFDNGIFTWSNMR-TAPTLSRLDRFLCTKDWMNVFADQRATRLVRTTSDHF 139
+ D +L D P +TWSN + P + +LDR + DW + F A + SDH
Sbjct: 256 LRDSDLVDIPSRGVHYTWSNHQDDNPIIRKLDRAIANGDWFSSFPSAIAVFELSGVSDHS 315
Query: 140 PIQLANEAI-KWGPTPFRFENASLDSPQLIPLVENWWKDNPLRGWFSYGFMEKLKGLKGI 199
P + E + K FR+ + P + + W++ G + E LK K
Sbjct: 316 PCIIILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKC 375
Query: 200 LVQWNIDVLGNVGKK 203
N GN+ K
Sbjct: 376 CKLLNRQGFGNIQHK 390
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_022145822.1 | 2.72e-65 | 100.00 | uncharacterized protein LOC111015182 [Momordica charantia] | [more] |
XP_021820446.1 | 3.72e-42 | 45.83 | uncharacterized protein LOC110762145 [Prunus avium] | [more] |
RVX05091.1 | 2.92e-39 | 43.60 | hypothetical protein CK203_020182 [Vitis vinifera] | [more] |
XP_019077787.1 | 5.39e-39 | 43.20 | PREDICTED: uncharacterized protein LOC104880237 [Vitis vinifera] >XP_019077788.1... | [more] |
RVW36761.1 | 9.21e-39 | 43.79 | hypothetical protein CK203_101569 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CXT6 | 1.31e-65 | 100.00 | uncharacterized protein LOC111015182 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
A0A6P5T1U8 | 1.80e-42 | 45.83 | uncharacterized protein LOC110762145 OS=Prunus avium OX=42229 GN=LOC110762145 PE... | [more] |
A0A438J819 | 1.41e-39 | 43.60 | zf-RVT domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_020182 PE=4... | [more] |
A0A438DMS8 | 4.46e-39 | 43.79 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_101569 PE=4 SV=1 | [more] |
A5B9I8 | 4.56e-39 | 43.02 | Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI... | [more] |
Match Name | E-value | Identity | Description | |
AT1G43760.1 | 6.1e-08 | 24.62 | DNAse I-like superfamily protein | [more] |