MC05g_new0133 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g_new0133
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC05: 7575068 .. 7575570 (+)
RNA-Seq ExpressionMC05g_new0133
SyntenyMC05g_new0133
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGGGGATGATCTTTCTTCTCCACTGGTTTCTGTGATGGTGGATGGTGGTCGGGTATTGGGGATCTCCCCGTTAGATGTTGACCATGTTGTTGTGGTTGGCAAAATCAAAACCAACGTTGTTATGTATGGTCTGTGGCTTAGTCATTTCGACATTTTGAAGAGTTATCAGGCACAGAATTGGAGATGACACCCACCTGCAATCTCTTGGGATGACTCTTTATCTCTGTTTCATCTTGGATCAGAGAACTTCCATGGTCCAATGGTAAGGAAGACGGAGCAATAGGTGGGCAACGACGAAGGTGCAGTGGCAATAGGTCAAACACCATTTTGGAATATGGGGATGCTATTGGTCTTAATTATATTAAGATTTGTGACCAGCATGATTTAGGAAATTTGCCTAATCTTTCCTTATCTGTCATGGTGGAGAATATAAAAGCAACTTTGGAGGCAATTATTTCTGTTCCAATTGTGAATAAGGATGTCATGCACCATTTCTGA

mRNA sequence

ATGTTCGGGGATGATCTTTCTTCTCCACTGGTTTCTGTGATGGTGGATGGTGGTCGGGTATTGGGGATCTCCCCGTTAGATGTTGACCATGTTGTTGTGGTTGGCAAAATCAAAACCAACGTTGTTATAGAACTTCCATGGTCCAATGGTAAGGAAGACGGAGCAATAGGTGGGCAACGACGAAGGTGCAGTGGCAATAGGTCAAACACCATTTTGGAATATGGGGATGCTATTGGTCTTAATTATATTAAGATTTGTGACCAGCATGATTTAGGAAATTTGCCTAATCTTTCCTTATCTGTCATGGTGGAGAATATAAAAGCAACTTTGGAGGCAATTATTTCTGTTCCAATTGTGAATAAGGATGTCATGCACCATTTCTGA

Coding sequence (CDS)

ATGTTCGGGGATGATCTTTCTTCTCCACTGGTTTCTGTGATGGTGGATGGTGGTCGGGTATTGGGGATCTCCCCGTTAGATGTTGACCATGTTGTTGTGGTTGGCAAAATCAAAACCAACGTTGTTATAGAACTTCCATGGTCCAATGGTAAGGAAGACGGAGCAATAGGTGGGCAACGACGAAGGTGCAGTGGCAATAGGTCAAACACCATTTTGGAATATGGGGATGCTATTGGTCTTAATTATATTAAGATTTGTGACCAGCATGATTTAGGAAATTTGCCTAATCTTTCCTTATCTGTCATGGTGGAGAATATAAAAGCAACTTTGGAGGCAATTATTTCTGTTCCAATTGTGAATAAGGATGTCATGCACCATTTCTGA

Protein sequence

MFGDDLSSPLVSVMVDGGRVLGISPLDVDHVVVVGKIKTNVVIELPWSNGKEDGAIGGQRRRCSGNRSNTILEYGDAIGLNYIKICDQHDLGNLPNLSLSVMVENIKATLEAIISVPIVNKDVMHHF
Homology
[Close]
BLAST of MC05g_new0133 vs. NCBI nr
Match: XP_022159860.1 (uncharacterized protein LOC111026150 [Momordica charantia])

HSP 1 Score: 56.6 bits (135), Expect = 2.65e-07
Identity = 43/116 (37.07%), Postives = 58/116 (50.00%), Query Frame = 0 

Query: 14  MVDGGRVLGISPLDVDHVVVVGKIKTNVVIELPWSNGKE--------------DGAIGGQ 73
           M D   +  ISPLD +  VVV KIK N+V+  PW    +              +  +G  
Sbjct: 1   MADSDWMSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWTRMMEQKVGDD 60

Query: 74  RRRCSGNRSNTILEYGDAIGLNYIKICDQHDLGNLPNLSLSVMVENIKATLEAIIS 115
               +  +SNT+L   + I LN ++I  QHD GNL N SL V VE+ K T + IIS
Sbjct: 61  GGAAT-IKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVED-KTTFDTIIS 114

[Close]
BLAST of MC05g_new0133 vs. ExPASy TrEMBL
Match: A0A6J1DZZ2 (uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026150 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.28e-07
Identity = 43/116 (37.07%), Postives = 58/116 (50.00%), Query Frame = 0 

Query: 14  MVDGGRVLGISPLDVDHVVVVGKIKTNVVIELPWSNGKE--------------DGAIGGQ 73
           M D   +  ISPLD +  VVV KIK N+V+  PW    +              +  +G  
Sbjct: 1   MADSDWMSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWTRMMEQKVGDD 60

Query: 74  RRRCSGNRSNTILEYGDAIGLNYIKICDQHDLGNLPNLSLSVMVENIKATLEAIIS 115
               +  +SNT+L   + I LN ++I  QHD GNL N SL V VE+ K T + IIS
Sbjct: 61  GGAAT-IKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVED-KTTFDTIIS 114

The following BLAST results are available for this feature:
BLAST of MC05g_new0133 vs.
Match NameE-valueIdentityDescription
BLAST of MC05g_new0133 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159860.12.65e-0737.07uncharacterized protein LOC111026150 [Momordica charantia][more]
BLAST of MC05g_new0133 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DZZ21.28e-0737.07uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
BLAST of MC05g_new0133 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g_new0133.1MC05g_new0133.1mRNA