MC05g_new0051 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g_new0051
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description3-ketoacyl-CoA synthase 1
LocationMC05: 3450966 .. 3454598 (-)
RNA-Seq ExpressionMC05g_new0051
SyntenyMC05g_new0051
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTATTATACTTTTTCTTAATAAACTTGTTAACACAAAAAAGACAATATAATATGAGAATTTGAAATACATTAAAGGTAATTTTTTTTAAAGATTAAAAATTAAATCGAGAGACTATGGGGTGTATATTTTGCCTTTATGTTTTCTCATTTTGTTTTTTTTGGAAAGAGAGAATTAAAATAAAAAGGACCCACAGCCATTCATAATCTCCCACGTGGGTTTAGCATTTATGGATACTGTGTATCACATAGAGGCTACGATCATTCAATGGGAACCTTGACCGGAAAACTGTCAATTGAGTCGAGCCACGGGTTGACTCGGTCGCACTCGGTCGCCGGAATATTCCTCAGCGCCTTCCAAACGGCGCTGTTACACTTGAAACCGGCTCCGAACGCCACCTGCCAGATCCGGTGGCCTTTCGAGACTCGATTCTTTGCTTCTGTATAAGCTAATTCGTACCACAGCGAGCTGCTCGATGTGTTTCCGAATCGGTACAGAGTCATCCTCGACGGTTCCATGTGGCACTCACTGAGTTGCAGGTTCTTCTGCAGCGCGTCCAGTACCGCTCTTCCGCCAGCGTGGATGCAGAAATGCTCGAAAGCGAGCTTAAAGTCAGGTACGTAGGGGTTCACATTCGCTTTCAGCACTTTCTTTTTCACCATAGAAACGAAGAACGCGAATTGCTCTGAAAATGGCAGTACCAATGGACCTAGAGTCGTAATGTTGGTCTTCAATGTCTCACTTGCGACCGCCATTAATTCGCGCGCGAGTGAGACTCCGATTTTTCCATTATCGTCCTCTCTCTGATACACGCAATTATAGCTCTTATCGTCGGCCCCTTTGTGAGTCCGAATCGTGTGAACCAACTCGTACTTCGACCGGACTCGATCGCCGGGCTTGTTCGACAACAGCACGGCGGCTCCTCCCATCCGAAACAGACAATTGCTGACCAACATCGAACGATCGTTGCCAAAGTACCAATTTAGGGTTATAGTTTCGGTGCTCAGAACGACTGCGTACGTGTTAGGGTTTGCATTGAGAAGGTCCTTAGCGAGCGCAATGGAGATCAGACCCGCGCTGCAGCCCATACCACTAAGATTGTAGCTCTTAATGTCGGTTCGAAGCTTGTAGTGGTTCACTATCATGGCGGATAGCGATGGTATGGGATTGAATAAGCTACAGTTGACGATTAAGATTCCTATTTCATTGGGGTTCAAGCCGGTTTTCTCGAACAGAGCATCGAGTGCGCCGAACATTACAGTCTGCGCTTCGAAGCGAGATTCGTCAAGACACAAATTCGGCGGCTGAGAAGCAATTCCTCTGGATAAGTAGGTTTCGTCGCCAAGACCGGCTCGCTTTGCTACTTTCGTCATAAACGGAATGGCCTCCTCTTTAAAGGCACCGCTCTCTGCGCTCATCTCGATGAAGCTGTCCACCGTTACCTTCCTCGCATCCTCCGGTTTGTAACAGGCAAACTCCACCAAATAAATCGGTGTGGATCGCTTGGACCAGTAGAGGCCGAGGAGAAATATCGACAGTAAACCGGAAATGGCCGTAGTTGCATCAATCCCATAGAACTGAAATCTTGTGGCCGGCAGTAAGTCAGACACCCGGAAGAGTTTGAAACCGGAAAGCTTGGAAATGAAAAGAGGCAAGATAACGAGCAACATAAGAGTAGTGGCAGAGTTGGATGAGTACCCATATCCTAATCTGACATATTTGAGCTTAACTGACTGTAAAAAGTCCGGCAAGCCTCGCCGGATTCTGATGAGGATGGAGGAGGAGTCCTTAAGCTCTACTTCTGCCGTTAATCCCTCGGTATCCATCTCAATTCTCTCCATATATTATAATCTTTTGCTAACTTCTCTCTGCAATCTTTGTGCAGCTCCCTCTCAAGTCTCACAGTTCTGGTTGAGTTCTTGAAGAACAATCTGTCCCAGCTTATATAACCGCAAGAAGAAGGCGACCCAGAGAAGAAGAGGGATATAGGCAGAAATTAATGAAGGTAAATGACTTGCACACTTACAATAGAGGGGTAGAGAGTCAGAGAGGGTTTGGCACTTGGCAGCAGGCCAAGCAAGGATAGATATAATGAATAGAGAAGAATTAAAAGCAAGGAGGGGTGTCCTCTAAAATAAATGGGAGTATTTCCAAGAATGGTGAGATAGCTCAACAACCACACATCTCTGCAAGTAAGTTGGACAGAAAGAGCTTTCTAATCAAAAACTTAATTAATGTAGAAATCTTTTTTCAATTGTAGTGGTTTTGAGATTGGTAGTTAGAAATTTATTTGCAATTTTCTTCTTAAATGACCTTTCTCCTCACTCTTCTAGTTAGCTATGATTATTAAGATCTGAATCAGTTCCATCTAGCTTCTTTTTTTCTCTCTCTCTGCAGATGAATTGATCATTTATGTTCGTGCCTAAACTTTTCCTCCAAAAAGGTACTCCTATCACTTTCTTGTTAGCTTCTTTGAAAATGAAAGAAGGTAGGAGAAAAGTTCTTAGTTGTTTTGGAAGGATACCATTAGTTGATGTCACTGTTATCATACGACTGCTGTGTGTCCCAAAGAAGCTGATTAGAGGAACCATTTTCTTGCATATTTTCATCTTTCAATCTACTTTAGCTGGTCGTGCCATTTTCTAAGAGTCCGTTTTGATAACCATTTTGTAAATAAAAGTTAAGAGTAGATTTGTTTACGTTTCTCATTCCCTTTCATATTTTTATTTTGTTCATTTTCTTTCATTGTCATAGATCCAATTTCCTCTATGCTAAGATAGACACTCTTATCTAATTTCATTTTGTTTTCCTAAACTACCCTCAATTGAATTTCCTCTAATTTCTCTTTTAGACCATGTACTATACTTTCTATATGCTTCCATTTTCCCTTGATGACTTGTCCAGCTCATCTCTATGCTCGGATTTCTTTTATTTTTTCCTTAAACTTCTAGGCTCCCTTCTTCCTCCCTCCCTTAATTATGCTAAATTTTTAGTTCTTTCATGTTAAATAATGGTCCAATAAATATTTTACCTAATGTACTAAATAAATCTTAATCAATGACTATGTTTAATATTAGTTATTGTTAGTTAATAACAATCATTCTAATCTATCTATTAAAAGTAATGACTAACCACATTCGCCTAATCTGATTATAATGAGGTAATTATTGTTTGGAAATAAATGTGAATTCTTTCTCTTGTCAGGTGTGCCAAATTAAGTTTGAGAAGCATTTGAAGAGAATAGGCTTAGAGAGTGCACTCTCGAATTGCTGTTGGGAAATATACAAGAATAGGTTGAGTTCTATGATCACTAAGACCTAAAGGTATCATATTAATGGCTTTTAATAGAATTAATTTGTCTAATCAACTCAATTGGCTCAAGGTGAATATGTATGCAACTATTTGATTACCTTAAAACAGAACAGCACAACTTTTCGGAATCGCAGAGGAGAAGTGATGGGTACCATACTCGAGGGATATTTATGTGGACCTGTTTGGTAATATTTTTGTATTTTGTTTATAGTTTTATTGAGAAGTTTAAGCATTTGACAACTATTTATGTTTCTTGTTTTTTATTTTTTTAGAAACATTCTCAAGATTGTATAAAAATTTTGAAAACCAAAAAAATAAGGG

mRNA sequence

ATGGCGGATAGCGATGGTATGGGATTGAATAAGCTACAGTTGACGATTAAGATTCCTATTTCATTGGGGTTCAAGCCGGTTTTCTCGAACAGAGCATCGAGTGCGCCGAACATTACAGTCTGCGCTTCGAAGCGAGATTCGTCAAGACACAAATTCGGCGGCTGA

Coding sequence (CDS)

ATGGCGGATAGCGATGGTATGGGATTGAATAAGCTACAGTTGACGATTAAGATTCCTATTTCATTGGGGTTCAAGCCGGTTTTCTCGAACAGAGCATCGAGTGCGCCGAACATTACAGTCTGCGCTTCGAAGCGAGATTCGTCAAGACACAAATTCGGCGGCTGA

Protein sequence

MADSDGMGLNKLQLTIKIPISLGFKPVFSNRASSAPNITVCASKRDSSRHKFGG
Homology
[Close]
BLAST of MC05g_new0051 vs. NCBI nr
Match: KAF4366513.1 (hypothetical protein F8388_003751 [Cannabis sativa])

HSP 1 Score: 70.1 bits (170), Expect = 2.32e-13
Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 1  MADSDGMGLNKLQLTIKIPISLGFKPVFSNRASSAPNITVCASKRDSSRHKFGG 54
          MAD +G+GLNKLQLTI+IP+SLG  PV +   S APN+TV AS R SS  +FGG
Sbjct: 1  MADKEGVGLNKLQLTIRIPMSLGLTPVLAKSESKAPNMTVSASNRASSMFRFGG 54

[Close]
BLAST of MC05g_new0051 vs. NCBI nr
Match: KAB2097830.1 (hypothetical protein ES319_A01G197200v1 [Gossypium barbadense] >KAG4215570.1 hypothetical protein ERO13_A01G185401v2 [Gossypium hirsutum] >TYI44204.1 hypothetical protein ES332_A01G220300v1 [Gossypium tomentosum] >TYJ50361.1 hypothetical protein E1A91_A01G200700v1 [Gossypium mustelinum])

HSP 1 Score: 58.5 bits (140), Expect = 2.83e-09
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0 

Query: 1   MADSDGMGLNKLQLTIKIPISLGFKPVFSNRASSAPNITVCASKRDSSRHKFGG 54
           +AD DG+G NKLQLTI+I  SLGF PVF N+ S A NIT+ AS   +S    GG
Sbjct: 52  IADKDGVGENKLQLTIRISTSLGFNPVFLNKESIAENITISASPLAASMVGVGG 105

[Close]
BLAST of MC05g_new0051 vs. NCBI nr
Match: KAG4163513.1 (hypothetical protein ERO13_D01G175901v2 [Gossypium hirsutum] >TYH89012.1 hypothetical protein ES332_D01G229100v1 [Gossypium tomentosum] >TYI98495.1 hypothetical protein E1A91_D01G218200v1 [Gossypium mustelinum])

HSP 1 Score: 55.8 bits (133), Expect = 3.23e-08
Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 0 

Query: 1   MADSDGMGLNKLQLTIKIPISLGFKPVFSNRASSAPNITVCASKRDSSRHKFGG 54
           +AD DG+G N+LQLTI+I +SLGF PVF N+ S A  IT+ AS   +S    GG
Sbjct: 52  IADKDGVGENRLQLTIRISMSLGFNPVFLNKESIAEKITISASPLAASMVGVGG 105

[Close]
BLAST of MC05g_new0051 vs. NCBI nr
Match: OAY63314.1 (hypothetical protein ACMD2_17107 [Ananas comosus])

HSP 1 Score: 56.6 bits (135), Expect = 5.60e-08
Identity = 29/45 (64.44%), Postives = 31/45 (68.89%), Query Frame = 0 

Query: 1  MADSDGMGLNKLQLTIKIPISLGFKPVFSNRASSAPNITVCASKR 45
          MADSDG+GL +LQ T   P SLG  PV  NR SSAPNIT  AS R
Sbjct: 1  MADSDGVGLKRLQFTTSTPTSLGLIPVARNRLSSAPNITCSASAR 45

[Close]
BLAST of MC05g_new0051 vs. NCBI nr
Match: TYJ43575.1 (hypothetical protein E1A91_A03G161800v1 [Gossypium mustelinum])

HSP 1 Score: 55.1 bits (131), Expect = 6.48e-08
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 0 

Query: 1   MADSDGMGLNKLQLTIKIPISLGFKPVFSNRASSAPNITVCASKRDSSRHKFGG 54
           +AD DG+G  +LQLTI+I +SLGF PVF N+ S A  IT  AS   +S   FGG
Sbjct: 52  IADKDGVGEKRLQLTIRISMSLGFSPVFLNKESIAEKITTSASPLAASMVGFGG 105

[Close]
BLAST of MC05g_new0051 vs. ExPASy TrEMBL
Match: A0A7J6F722 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_003751 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.13e-13
Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 1  MADSDGMGLNKLQLTIKIPISLGFKPVFSNRASSAPNITVCASKRDSSRHKFGG 54
          MAD +G+GLNKLQLTI+IP+SLG  PV +   S APN+TV AS R SS  +FGG
Sbjct: 1  MADKEGVGLNKLQLTIRIPMSLGLTPVLAKSESKAPNMTVSASNRASSMFRFGG 54

[Close]
BLAST of MC05g_new0051 vs. ExPASy TrEMBL
Match: A0A2P2QQP1 (3-ketoacyl-CoA synthase 1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.22e-12
Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 0 

Query: 1  MADSDGMGLNKLQLTIKIPISLGFKPVFSNRASSAPNITVCASKRDSSRHKFGG 54
          M +SDG+GLNKLQ TI++P+SLG  PV +  ASSAPN+T  AS R S   KFGG
Sbjct: 1  MEESDGVGLNKLQFTIRMPMSLGLTPVLAKSASSAPNMTDSASARASFMLKFGG 54

[Close]
BLAST of MC05g_new0051 vs. ExPASy TrEMBL
Match: A0A0A9IE13 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.64e-11
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 0 

Query: 1  MADSDGMGLNKLQLTIKIPISLGFKPVFSNRASSAPNITVCASKRDSSRHKFGG 54
          MADSDG+GL +LQLT + P+SLGF PV ++ +S+APN+T  AS R +S    GG
Sbjct: 1  MADSDGVGLKRLQLTTRTPMSLGFTPVLASSSSTAPNMTSRASSRAASMDGLGG 54

[Close]
BLAST of MC05g_new0051 vs. ExPASy TrEMBL
Match: A0A7C9CZH1 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.99e-10
Identity = 30/43 (69.77%), Postives = 34/43 (79.07%), Query Frame = 0 

Query: 1  MADSDGMGLNKLQLTIKIPISLGFKPVFSNRASSAPNITVCAS 43
          MA+SDG+GLNKLQ T KIPISLG  PV + R+S APNIT  AS
Sbjct: 12 MAESDGVGLNKLQFTTKIPISLGLTPVVAKRSSRAPNITSSAS 54

[Close]
BLAST of MC05g_new0051 vs. ExPASy TrEMBL
Match: A0A5D2RXM3 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A01G220300v1 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.37e-09
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0 

Query: 1   MADSDGMGLNKLQLTIKIPISLGFKPVFSNRASSAPNITVCASKRDSSRHKFGG 54
           +AD DG+G NKLQLTI+I  SLGF PVF N+ S A NIT+ AS   +S    GG
Sbjct: 52  IADKDGVGENKLQLTIRISTSLGFNPVFLNKESIAENITISASPLAASMVGVGG 105

The following BLAST results are available for this feature:
BLAST of MC05g_new0051 vs.
Match NameE-valueIdentityDescription
BLAST of MC05g_new0051 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF4366513.12.32e-1362.96hypothetical protein F8388_003751 [Cannabis sativa][more]
KAB2097830.12.83e-0957.41hypothetical protein ES319_A01G197200v1 [Gossypium barbadense] >KAG4215570.1 hyp... [more]
KAG4163513.13.23e-0853.70hypothetical protein ERO13_D01G175901v2 [Gossypium hirsutum] >TYH89012.1 hypothe... [more]
OAY63314.15.60e-0864.44hypothetical protein ACMD2_17107 [Ananas comosus][more]
TYJ43575.16.48e-0853.70hypothetical protein E1A91_A03G161800v1 [Gossypium mustelinum][more]
BLAST of MC05g_new0051 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7J6F7221.13e-1362.96Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_003751 PE=4 SV=1[more]
A0A2P2QQP11.22e-1261.113-ketoacyl-CoA synthase 1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
A0A0A9IE138.64e-1155.56Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A7C9CZH11.99e-1069.77Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1[more]
A0A5D2RXM31.37e-0957.41Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A01G220300v1 P... [more]
BLAST of MC05g_new0051 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g_new0051.1MC05g_new0051.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane