MC05g1367 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g1367
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPolypeptide N-acetylgalactosaminyltransferase 35A
LocationMC05: 17897935 .. 17898249 (-)
RNA-Seq ExpressionMC05g1367
SyntenyMC05g1367
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTGCTTGGCGTGTCTATTGCCTCTGTTTCTCATTCCAGTCGTCAACGCCCTGCCGGTTCTGTTCTACTTAATTATGGTATGCCAACGTGATTTATCTCTCTATCTCTTAAAGATTTCGAGTTTTCTGTGCTATTGAATGGAATTTCGTTAATAATCGTCCCAATTCGCTGTTTTCGCCCCCCTTTTCTTTTGTGTTTCTTGAATTTTCTTTCAGGGAAAAATTTATGGACTTTTTGGCTGGGAGTATAGAAAACCGGAAAGGGTACCACCGGCTTGTCCCTATCGCCCTGCTGCAAAACAAAATGGAAATGTG

mRNA sequence

GTTTGCTTGGCGTGTCTATTGCCTCTGTTTCTCATTCCAGTCGTCAACGCCCTGCCGGTTCTGTTCTACTTAATTATGGGAAAAATTTATGGACTTTTTGGCTGGGAGTATAGAAAACCGGAAAGGGTACCACCGGCTTGTCCCTATCGCCCTGCTGCAAAACAAAATGGAAATGTG

Coding sequence (CDS)

GTTTGCTTGGCGTGTCTATTGCCTCTGTTTCTCATTCCAGTCGTCAACGCCCTGCCGGTTCTGTTCTACTTAATTATGGGAAAAATTTATGGACTTTTTGGCTGGGAGTATAGAAAACCGGAAAGGGTACCACCGGCTTGTCCCTATCGCCCTGCTGCAAAACAAAATGGAAATGTG

Protein sequence

VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV
Homology
BLAST of MC05g1367 vs. NCBI nr
Match: XP_022144783.1 (uncharacterized protein LOC111014385 [Momordica charantia])

HSP 1 Score: 124 bits (310), Expect = 2.57e-35
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV 59
          VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV
Sbjct: 2  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV 60

BLAST of MC05g1367 vs. NCBI nr
Match: XP_038903023.1 (uncharacterized protein LOC120089725 [Benincasa hispida])

HSP 1 Score: 119 bits (299), Expect = 1.23e-33
Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = 0

Query: 1  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV 59
          VCLACLLPLFLIPVVNALPVLFYLIMGKIYG+FGWEYRKP+RVPPACPYRPAAKQN NV
Sbjct: 2  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNV 60

BLAST of MC05g1367 vs. NCBI nr
Match: XP_008442719.1 (PREDICTED: uncharacterized protein LOC103486509 [Cucumis melo] >XP_011651967.1 uncharacterized protein LOC105434961 [Cucumis sativus] >KGN58993.1 hypothetical protein Csa_002586 [Cucumis sativus])

HSP 1 Score: 117 bits (293), Expect = 1.01e-32
Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 0

Query: 1  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV 59
          VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKP+ VPPACPYRPAAKQN NV
Sbjct: 2  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60

BLAST of MC05g1367 vs. NCBI nr
Match: XP_022983172.1 (uncharacterized protein LOC111481805 [Cucurbita maxima])

HSP 1 Score: 115 bits (289), Expect = 3.78e-32
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0

Query: 1  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV 59
          VCLACLLPLFLIPVVNALPVLF LIMGKIYG+FGWEYRKP+RVPPACPYRPAAKQN NV
Sbjct: 2  VCLACLLPLFLIPVVNALPVLFDLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNV 60

BLAST of MC05g1367 vs. NCBI nr
Match: XP_022935585.1 (uncharacterized protein LOC111442415 isoform X2 [Cucurbita moschata] >XP_022935586.1 uncharacterized protein LOC111442415 isoform X2 [Cucurbita moschata])

HSP 1 Score: 115 bits (289), Expect = 3.89e-32
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0

Query: 1  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV 59
          VCLACLLPLFLIPVVNALPVLF LIMGKIYG+FGWEYRKP+RVPPACPYRPAAKQN NV
Sbjct: 2  VCLACLLPLFLIPVVNALPVLFDLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNV 60

BLAST of MC05g1367 vs. ExPASy TrEMBL
Match: A0A6J1CU80 (uncharacterized protein LOC111014385 OS=Momordica charantia OX=3673 GN=LOC111014385 PE=4 SV=1)

HSP 1 Score: 124 bits (310), Expect = 1.25e-35
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV 59
          VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV
Sbjct: 2  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV 60

BLAST of MC05g1367 vs. ExPASy TrEMBL
Match: A0A0A0LB44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G741830 PE=4 SV=1)

HSP 1 Score: 117 bits (293), Expect = 4.89e-33
Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 0

Query: 1  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV 59
          VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKP+ VPPACPYRPAAKQN NV
Sbjct: 2  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60

BLAST of MC05g1367 vs. ExPASy TrEMBL
Match: A0A1S3B744 (uncharacterized protein LOC103486509 OS=Cucumis melo OX=3656 GN=LOC103486509 PE=4 SV=1)

HSP 1 Score: 117 bits (293), Expect = 4.89e-33
Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 0

Query: 1  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV 59
          VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKP+ VPPACPYRPAAKQN NV
Sbjct: 2  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPQVVPPACPYRPAAKQNSNV 60

BLAST of MC05g1367 vs. ExPASy TrEMBL
Match: A0A6J1IYJ1 (uncharacterized protein LOC111481805 OS=Cucurbita maxima OX=3661 GN=LOC111481805 PE=4 SV=1)

HSP 1 Score: 115 bits (289), Expect = 1.83e-32
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0

Query: 1  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV 59
          VCLACLLPLFLIPVVNALPVLF LIMGKIYG+FGWEYRKP+RVPPACPYRPAAKQN NV
Sbjct: 2  VCLACLLPLFLIPVVNALPVLFDLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNV 60

BLAST of MC05g1367 vs. ExPASy TrEMBL
Match: A0A6J1F536 (uncharacterized protein LOC111442415 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442415 PE=4 SV=1)

HSP 1 Score: 115 bits (289), Expect = 1.88e-32
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0

Query: 1  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQNGNV 59
          VCLACLLPLFLIPVVNALPVLF LIMGKIYG+FGWEYRKP+RVPPACPYRPAAKQN NV
Sbjct: 2  VCLACLLPLFLIPVVNALPVLFDLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNV 60

BLAST of MC05g1367 vs. TAIR 10
Match: AT5G03460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 2.1e-14
Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 0

Query: 1  VCLACLLPLFLIPVVNALPVLFYLIMGKIYGLFGWEYRKPERVPPACPYRPAAKQN 57
          VC+ CL+PLFL+P++N +P +    M K+Y   GWEYRKP RVPPACP++P AK +
Sbjct: 2  VCVMCLVPLFLVPLINLMPRIIDYFMAKLYAWLGWEYRKPARVPPACPFKPVAKND 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022144783.12.57e-35100.00uncharacterized protein LOC111014385 [Momordica charantia][more]
XP_038903023.11.23e-3394.92uncharacterized protein LOC120089725 [Benincasa hispida][more]
XP_008442719.11.01e-3294.92PREDICTED: uncharacterized protein LOC103486509 [Cucumis melo] >XP_011651967.1 u... [more]
XP_022983172.13.78e-3293.22uncharacterized protein LOC111481805 [Cucurbita maxima][more]
XP_022935585.13.89e-3293.22uncharacterized protein LOC111442415 isoform X2 [Cucurbita moschata] >XP_0229355... [more]
Match NameE-valueIdentityDescription
A0A6J1CU801.25e-35100.00uncharacterized protein LOC111014385 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A0A0LB444.89e-3394.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G741830 PE=4 SV=1[more]
A0A1S3B7444.89e-3394.92uncharacterized protein LOC103486509 OS=Cucumis melo OX=3656 GN=LOC103486509 PE=... [more]
A0A6J1IYJ11.83e-3293.22uncharacterized protein LOC111481805 OS=Cucurbita maxima OX=3661 GN=LOC111481805... [more]
A0A6J1F5361.88e-3293.22uncharacterized protein LOC111442415 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
AT5G03460.12.1e-1455.36unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37756TRANSMEMBRANE PROTEINcoord: 1..57

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g1367.1MC05g1367.1mRNA