MC05g1241 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g1241
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC05: 16646641 .. 16646781 (-)
RNA-Seq ExpressionMC05g1241
SyntenyMC05g1241
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGCACGGCGAATTCAGTTGAAGGAAACAGCTCAGAAGCTCCCGAAGCCCTTCCTGAGTGTAAATTTCGTTCTCCAGAATCATCTGCAGCATCGACTGCCGGAAATCAACGTACGGATCGCTCGAATCCTTCTCCAC

mRNA sequence

ATGGTTGCACGGCGAATTCAGTTGAAGGAAACAGCTCAGAAGCTCCCGAAGCCCTTCCTGAGTGTAAATTTCGTTCTCCAGAATCATCTGCAGCATCGACTGCCGGAAATCAACGTACGGATCGCTCGAATCCTTCTCCAC

Coding sequence (CDS)

ATGGTTGCACGGCGAATTCAGTTGAAGGAAACAGCTCAGAAGCTCCCGAAGCCCTTCCTGAGTGTAAATTTCGTTCTCCAGAATCATCTGCAGCATCGACTGCCGGAAATCAACGTACGGATCGCTCGAATCCTTCTCCAC

Protein sequence

MVARRIQLKETAQKLPKPFLSVNFVLQNHLQHRLPEINVRIARILLH
Homology
BLAST of MC05g1241 vs. NCBI nr
Match: TYK07438.1 (hypothetical protein E5676_scaffold202G001680 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 3.34e-09
Identity = 31/47 (65.96%), Postives = 35/47 (74.47%), Query Frame = 0

Query: 1  MVARRIQLKETAQKLPKPFLSVNFVLQNHLQHRLPEINVRIARILLH 47
          MV RRIQL+ET +K  + FL VN VLQNHL HR+ EI VRI  ILLH
Sbjct: 1  MVRRRIQLQETPKKPSQIFLGVNLVLQNHLNHRMSEIQVRIVGILLH 47

BLAST of MC05g1241 vs. NCBI nr
Match: PON70071.1 (hypothetical protein PanWU01x14_082460 [Parasponia andersonii])

HSP 1 Score: 57.8 bits (138), Expect = 6.81e-09
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0

Query: 1  MVARRIQLKETAQKLPKPFLSVNFVLQNHLQHRLPEINVRIARILLH 47
          MV  R+QL+E  ++L +  L VN VLQ HLQHRLPE+ VRI R+LLH
Sbjct: 37 MVGGRVQLEEAVEELAEVVLGVNLVLQYHLQHRLPEVQVRIVRLLLH 83

BLAST of MC05g1241 vs. NCBI nr
Match: TYJ39702.1 (hypothetical protein E1A91_A04G087500v1 [Gossypium mustelinum])

HSP 1 Score: 49.7 bits (117), Expect = 3.49e-06
Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 0

Query: 1  MVARRIQLKETAQKLPKPFLSVNFVLQNHLQHRLPEINVRIARILLH 47
          MV RRIQL+ET +KL +    +   LQ HLQH +PE+ +R+  +LLH
Sbjct: 32 MVIRRIQLQETVEKLSQIIFRIYLFLQYHLQHGVPEVQIRVVGVLLH 78

BLAST of MC05g1241 vs. NCBI nr
Match: KAB2034827.1 (hypothetical protein ES319_D04G110800v1 [Gossypium barbadense])

HSP 1 Score: 48.1 bits (113), Expect = 1.41e-05
Identity = 22/47 (46.81%), Postives = 31/47 (65.96%), Query Frame = 0

Query: 1  MVARRIQLKETAQKLPKPFLSVNFVLQNHLQHRLPEINVRIARILLH 47
          MV RRIQL+ET +KL +    +   LQ HLQH +PE+ +R+  + LH
Sbjct: 32 MVIRRIQLQETVEKLSQIIFRIYLFLQYHLQHGVPEVQIRVVGVFLH 78

BLAST of MC05g1241 vs. NCBI nr
Match: XP_034887384.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC118027978 [Populus alba])

HSP 1 Score: 45.8 bits (107), Expect = 1.48e-04
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0

Query: 1  MVARRIQLKETAQKLPKPFLSVNFVLQNHLQHRLPEINVRIARILL 46
          M  RRI L+ET +KL K    VN +LQ HLQH + +I +R+ RI L
Sbjct: 30 MTVRRIXLQETIKKLSKIIFRVNLLLQYHLQHXVSKIQIRVIRIFL 75

BLAST of MC05g1241 vs. ExPASy TrEMBL
Match: A0A5D3C8E6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001680 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.62e-09
Identity = 31/47 (65.96%), Postives = 35/47 (74.47%), Query Frame = 0

Query: 1  MVARRIQLKETAQKLPKPFLSVNFVLQNHLQHRLPEINVRIARILLH 47
          MV RRIQL+ET +K  + FL VN VLQNHL HR+ EI VRI  ILLH
Sbjct: 1  MVRRRIQLQETPKKPSQIFLGVNLVLQNHLNHRMSEIQVRIVGILLH 47

BLAST of MC05g1241 vs. ExPASy TrEMBL
Match: A0A2P5D9V0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_082460 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.30e-09
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0

Query: 1  MVARRIQLKETAQKLPKPFLSVNFVLQNHLQHRLPEINVRIARILLH 47
          MV  R+QL+E  ++L +  L VN VLQ HLQHRLPE+ VRI R+LLH
Sbjct: 37 MVGGRVQLEEAVEELAEVVLGVNLVLQYHLQHRLPEVQVRIVRLLLH 83

BLAST of MC05g1241 vs. ExPASy TrEMBL
Match: A0A0A0KIS5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454390 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.87e-08
Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = 0

Query: 1  MVARRIQLKETAQKLPKPFLSVNFVLQNHLQHRLPEINVRIARILL 46
          MV RRIQL+ET +K  + FL V  VLQNHL HR+ EI VRI RILL
Sbjct: 1  MVRRRIQLQETPKKPSQIFLRVYLVLQNHLNHRVSEIQVRIVRILL 46

BLAST of MC05g1241 vs. ExPASy TrEMBL
Match: A0A5D2ZM51 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A04G087500v1 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.69e-06
Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 0

Query: 1  MVARRIQLKETAQKLPKPFLSVNFVLQNHLQHRLPEINVRIARILLH 47
          MV RRIQL+ET +KL +    +   LQ HLQH +PE+ +R+  +LLH
Sbjct: 32 MVIRRIQLQETVEKLSQIIFRIYLFLQYHLQHGVPEVQIRVVGVLLH 78

BLAST of MC05g1241 vs. ExPASy TrEMBL
Match: A0A5J5RUT1 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D04G110800v1 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 6.83e-06
Identity = 22/47 (46.81%), Postives = 31/47 (65.96%), Query Frame = 0

Query: 1  MVARRIQLKETAQKLPKPFLSVNFVLQNHLQHRLPEINVRIARILLH 47
          MV RRIQL+ET +KL +    +   LQ HLQH +PE+ +R+  + LH
Sbjct: 32 MVIRRIQLQETVEKLSQIIFRIYLFLQYHLQHGVPEVQIRVVGVFLH 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
TYK07438.13.34e-0965.96hypothetical protein E5676_scaffold202G001680 [Cucumis melo var. makuwa][more]
PON70071.16.81e-0959.57hypothetical protein PanWU01x14_082460 [Parasponia andersonii][more]
TYJ39702.13.49e-0648.94hypothetical protein E1A91_A04G087500v1 [Gossypium mustelinum][more]
KAB2034827.11.41e-0546.81hypothetical protein ES319_D04G110800v1 [Gossypium barbadense][more]
XP_034887384.11.48e-0450.00LOW QUALITY PROTEIN: uncharacterized protein LOC118027978 [Populus alba][more]
Match NameE-valueIdentityDescription
A0A5D3C8E61.62e-0965.96Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A2P5D9V03.30e-0959.57Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_082460 PE... [more]
A0A0A0KIS55.87e-0865.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454390 PE=4 SV=1[more]
A0A5D2ZM511.69e-0648.94Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A04G087500v1 P... [more]
A0A5J5RUT16.83e-0646.81Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D04G110800v1 PE... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g1241.1MC05g1241.1mRNA