MC05g1025 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g1025
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionWerner Syndrome-like exonuclease
LocationMC05: 13864271 .. 13865724 (+)
RNA-Seq ExpressionMC05g1025
SyntenyMC05g1025
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGACAACGATTTTAGATAGTGTGGGGACAATGATTAAACACGTGGCAATGTTTCTTTCGCGGATTTTAAAAAACGTGATCTGTGAGAAGTTTGGATGGTGTGAAAATTTTGGATTGTTTCAAATTCAAAACATAAGTAAAATATGAGGTTAAAAGTTTGGTGAAATGGTTGAGTGGAAGTTAATGTATATTCGTCTTTTCACTAAAGGTGGGTTCAAAATTAAGTAGGGGTGAGGTCAAAAATTAGGTTTTTTTAAAATTGGTTCATTTATCCAATTTGAACTATTGTGGGGTTCAAAACCCCAATTTCCCAAGGTTTAAAAAGTTTTCAAGGGTATTTTGGTCCAATAAATAAACTTGGGGCGATTTAGAACTCAGTCTTCTCTTCAGTCTTCTCTTCGTTTTCAAGAAAACAGAATCTCTCTTCTCTCTGTGTCTCCGCCATGGCTATCAGCATCGTCGACCACGAAATTCCCTCCGATTCCCACAATTTGTACGACGTTACCATTGATTCCGATCAGATTCACACTCTCCTCACATCTTCTCCGGCCATGGTCGATTCCTGGATCTCTGAAACCCTCGCCATTCAGACTCCACCTCTCATCGTTGGTCTCGACATCGAGTGGCGCCCTAACAGAAATAGCTCTTACGAAAACCCCGTCGCCACACTGCAACTCTGTTTCGATCGCCGATGCCTCATTTTTCAACTCATTCACGCCTCCGAGATCCCTCGCTCTCTGACCGATTTCTTGACCGACGAGTCCTTCACCTTCGTCGGAGTCGGAATCGGCGAGGACGTCGAGAAGCTCCTCTGCGATTACGGCTTGAACGTGAGCAACACTGTGGATCTGAGGAATTTGGCCGAGAATGCGATGGGAAGAGGAGATCTGAAGAATGCGGGATTGAAGGGCTTGGCGAAAGAGGTTCTTGGAAAGGAGATTTCTAAGCCGAAGAGCGTGACGATGAGTCGGTGGGATAATGAATGGCTGGTTCCCAATCAGGTGAAATATGCTTGCGTTGATGCGTTTCTGTCATCTGAGATTGGAAGGCATCTTTCCAATCGAAGGGAATCAGGGGAAAATGTTGATGATTCCTAGGGTTCTTTCTGTTTCATGGATTTTGTGCAGCAGACTTGGATCACCAATTGTAGCATTTCGATTTCCGTTTCTCTTCTCAGTTATGACTTCCAAATATCAGATTTGAAGAATATGGGTTCTTTGATTGTGTAATCTTTATTCCCTGGTCTTCTTTCTCTTTCTCTTTCAAATGCTTTTGCAATCTCAAATCAAAATTTAACACCATGTGGTTTGAGAATTGTTCCGAGTCGTTTATTCAGAGACTGCTTTCTTGTAGTTTGGATTTTTCTTTCAATGTCAACATCAGTCTTACGGGATATTTTTTAATTTGTCCAAAATTGAAGAAAAGTATCTTACAGTGCAGGTTTGATTGATACG

mRNA sequence

GTGACAACGATTTTAGATAGTGTGGGGACAATGATTAAACACGTGGCAATGTTTCTTTCGCGGATTTTAAAAAACGTGATCTGTGAGAAGTTTGGATGGTGTGAAAATTTTGGATTGTTTCAAATTCAAAACATAAGTAAAATATGAGGTTAAAAGTTTGGTGAAATGGTTGAGTGGAAGTTAATGTATATTCGTCTTTTCACTAAAGGTGGGTTCAAAATTAAGTAGGGGTGAGGTCAAAAATTAGGTTTTTTTAAAATTGGTTCATTTATCCAATTTGAACTATTGTGGGGTTCAAAACCCCAATTTCCCAAGGTTTAAAAAGTTTTCAAGGGTATTTTGGTCCAATAAATAAACTTGGGGCGATTTAGAACTCAGTCTTCTCTTCAGTCTTCTCTTCGTTTTCAAGAAAACAGAATCTCTCTTCTCTCTGTGTCTCCGCCATGGCTATCAGCATCGTCGACCACGAAATTCCCTCCGATTCCCACAATTTGTACGACGTTACCATTGATTCCGATCAGATTCACACTCTCCTCACATCTTCTCCGGCCATGGTCGATTCCTGGATCTCTGAAACCCTCGCCATTCAGACTCCACCTCTCATCGTTGGTCTCGACATCGAGTGGCGCCCTAACAGAAATAGCTCTTACGAAAACCCCGTCGCCACACTGCAACTCTGTTTCGATCGCCGATGCCTCATTTTTCAACTCATTCACGCCTCCGAGATCCCTCGCTCTCTGACCGATTTCTTGACCGACGAGTCCTTCACCTTCGTCGGAGTCGGAATCGGCGAGGACGTCGAGAAGCTCCTCTGCGATTACGGCTTGAACGTGAGCAACACTGTGGATCTGAGGAATTTGGCCGAGAATGCGATGGGAAGAGGAGATCTGAAGAATGCGGGATTGAAGGGCTTGGCGAAAGAGGTTCTTGGAAAGGAGATTTCTAAGCCGAAGAGCGTGACGATGAGTCGGTGGGATAATGAATGGCTGGTTCCCAATCAGGTGAAATATGCTTGCGTTGATGCGTTTCTGTCATCTGAGATTGGAAGGCATCTTTCCAATCGAAGGGAATCAGGGGAAAATGTTGATGATTCCTAGGGTTCTTTCTGTTTCATGGATTTTGTGCAGCAGACTTGGATCACCAATTGTAGCATTTCGATTTCCGTTTCTCTTCTCAGTTATGACTTCCAAATATCAGATTTGAAGAATATGGGTTCTTTGATTGTGTAATCTTTATTCCCTGGTCTTCTTTCTCTTTCTCTTTCAAATGCTTTTGCAATCTCAAATCAAAATTTAACACCATGTGGTTTGAGAATTGTTCCGAGTCGTTTATTCAGAGACTGCTTTCTTGTAGTTTGGATTTTTCTTTCAATGTCAACATCAGTCTTACGGGATATTTTTTAATTTGTCCAAAATTGAAGAAAAGTATCTTACAGTGCAGGTTTGATTGATACG

Coding sequence (CDS)

ATGGCTATCAGCATCGTCGACCACGAAATTCCCTCCGATTCCCACAATTTGTACGACGTTACCATTGATTCCGATCAGATTCACACTCTCCTCACATCTTCTCCGGCCATGGTCGATTCCTGGATCTCTGAAACCCTCGCCATTCAGACTCCACCTCTCATCGTTGGTCTCGACATCGAGTGGCGCCCTAACAGAAATAGCTCTTACGAAAACCCCGTCGCCACACTGCAACTCTGTTTCGATCGCCGATGCCTCATTTTTCAACTCATTCACGCCTCCGAGATCCCTCGCTCTCTGACCGATTTCTTGACCGACGAGTCCTTCACCTTCGTCGGAGTCGGAATCGGCGAGGACGTCGAGAAGCTCCTCTGCGATTACGGCTTGAACGTGAGCAACACTGTGGATCTGAGGAATTTGGCCGAGAATGCGATGGGAAGAGGAGATCTGAAGAATGCGGGATTGAAGGGCTTGGCGAAAGAGGTTCTTGGAAAGGAGATTTCTAAGCCGAAGAGCGTGACGATGAGTCGGTGGGATAATGAATGGCTGGTTCCCAATCAGGTGAAATATGCTTGCGTTGATGCGTTTCTGTCATCTGAGATTGGAAGGCATCTTTCCAATCGAAGGGAATCAGGGGAAAATGTTGATGATTCCTAG

Protein sequence

MAISIVDHEIPSDSHNLYDVTIDSDQIHTLLTSSPAMVDSWISETLAIQTPPLIVGLDIEWRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDVEKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDNEWLVPNQVKYACVDAFLSSEIGRHLSNRRESGENVDDS
Homology
BLAST of MC05g1025 vs. ExPASy Swiss-Prot
Match: Q84LH3 (Werner Syndrome-like exonuclease OS=Arabidopsis thaliana OX=3702 GN=WEX PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.2e-20
Identity = 57/145 (39.31%), Postives = 82/145 (56.55%), Query Frame = 0

Query: 55  VGLDIEWRPN-RNSSYENPVATLQLCFDRR-CLIFQLIHASEIPRSLTDFLTDESFTFVG 114
           VGLDIEWRP+ R       VAT+Q+C D   C +  + H S IP+SL   + D +   VG
Sbjct: 130 VGLDIEWRPSFRKGVLPGKVATVQICVDSNYCDVMHIFH-SGIPQSLQHLIEDSTLVKVG 189

Query: 115 VGIGEDVEKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSV 174
           +GI  D  KL  DYG+++ +  DL +LA   +G GD K  GL  L + ++ KE+ KP  +
Sbjct: 190 IGIDGDSVKLFHDYGVSIKDVEDLSDLANQKIG-GD-KKWGLASLTETLVCKELLKPNRI 249

Query: 175 TMSRWDNEWLVPNQVKYACVDAFLS 198
            +  W+   L   Q++YA  DA+ S
Sbjct: 250 RLGNWEFYPLSKQQLQYAATDAYAS 271

BLAST of MC05g1025 vs. ExPASy Swiss-Prot
Match: O09053 (Werner syndrome ATP-dependent helicase homolog OS=Mus musculus OX=10090 GN=Wrn PE=1 SV=3)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17
Identity = 56/175 (32.00%), Postives = 92/175 (52.57%), Query Frame = 0

Query: 40  SWISETLAIQ-TPPLIVGLDIEWRPNRNSSYENPVATLQLCF-DRRCLIFQLIHASEIPR 99
           S++SE ++++ +   +VG D+EW P       + VA +QLC  + +C +F +   S  P+
Sbjct: 57  SFLSEDISMRLSDGDVVGFDMEWPPIYKPGKRSRVAVIQLCVSESKCYLFHISSMSVFPQ 116

Query: 100 SLTDFLTDESFTFVGVGIGEDVEKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGL 159
            L   L ++S    GVGI  D  KLL D+ + + + V+L ++A   +   +     L GL
Sbjct: 117 GLKMLLENKSIKKAGVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAE--TWSLNGL 176

Query: 160 AKEVLGKEISKPKSVTMSRWDNEWLVPNQVKYACVDAFLSSEIGRHLSNRRESGE 213
            K VLGK++ K KS+  S W N  L  +Q  YA  DA+    I + L N  ++ +
Sbjct: 177 VKHVLGKQLLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKLGNLGDTAQ 229

BLAST of MC05g1025 vs. ExPASy Swiss-Prot
Match: Q14191 (Werner syndrome ATP-dependent helicase OS=Homo sapiens OX=9606 GN=WRN PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 4.7e-16
Identity = 54/167 (32.34%), Postives = 86/167 (51.50%), Query Frame = 0

Query: 40  SWISETLAIQ-TPPLIVGLDIEWRPNRNSSYENPVATLQLCF-DRRCLIFQLIHASEIPR 99
           S++SE +++  +   +VG D+EW P  N      VA +QLC  + +C +F +   S  P+
Sbjct: 63  SFLSEDISMSLSDGDVVGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSSMSVFPQ 122

Query: 100 SLTDFLTDESFTFVGVGIGEDVEKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGL 159
            L   L +++    GVGI  D  KLL D+ + + N V+L ++A   +     +   L  L
Sbjct: 123 GLKMLLENKAVKKAGVGIEGDQWKLLRDFDIKLKNFVELTDVANKKL--KCTETWSLNSL 182

Query: 160 AKEVLGKEISKPKSVTMSRWDNEWLVPNQVKYACVDAFLSSEIGRHL 205
            K +LGK++ K KS+  S W    L  +Q  YA  DA+    I R+L
Sbjct: 183 VKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227

BLAST of MC05g1025 vs. ExPASy Swiss-Prot
Match: Q9VGN7 (Exonuclease 3'-5' domain-containing protein 2 OS=Drosophila melanogaster OX=7227 GN=Exd2 PE=2 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 8.1e-16
Identity = 60/170 (35.29%), Postives = 83/170 (48.82%), Query Frame = 0

Query: 54  IVGLDIEWRPNRNSSYENPVATLQLCFDR-RCLIFQLIHASEIPRSLTDFLTDESFTFVG 113
           ++G D EW     S    PVA LQL   R  C +F+L H  +IP+ L + L D+S   VG
Sbjct: 79  VLGFDCEWITVGGS--RRPVALLQLSSHRGLCALFRLCHMKQIPQDLRELLEDDSVIKVG 138

Query: 114 VGIGEDVEKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSV 173
           V   ED  KL  DYG+ V++T+DLR L   A      K  GL  L+K  L   + K   +
Sbjct: 139 VAPQEDAMKLSHDYGVGVASTLDLRFLCVMA----GHKPEGLGKLSKTHLNYTLDKHWRL 198

Query: 174 TMSRWDNEWLVPNQVKYACVDAFLSSEI---------GRHLSNRRESGEN 214
             S W+ + L P Q+ YA  DA ++  I          +H   RR+  +N
Sbjct: 199 ACSNWEAKTLEPKQLDYAANDALMAVAIYQKLCRDLQPKHFWQRRQLDDN 242

BLAST of MC05g1025 vs. ExPASy Swiss-Prot
Match: Q9NVH0 (Exonuclease 3'-5' domain-containing protein 2 OS=Homo sapiens OX=9606 GN=EXD2 PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.8e-15
Identity = 60/172 (34.88%), Postives = 82/172 (47.67%), Query Frame = 0

Query: 54  IVGLDIEWRPNRNSSYENPVATLQLCF-DRRCLIFQL----IHASEIPRSLTDFLTDESF 113
           ++G+D EW      +  +P++ LQ+      C++ +L         +PR+L D L D + 
Sbjct: 104 VLGIDCEWVNLEGKA--SPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTI 163

Query: 114 TFVGVGIGEDVEKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISK 173
             VGVG  ED  KLL DYGL V   +DLR LA             LK LA+ VL   + K
Sbjct: 164 LKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDK 223

Query: 174 PKSVTMSRWDNEWLVPNQVKYACVDAFLSSEIGRHL----SNRRESGENVDD 217
              +  S WD E L  +QV YA  DA +S  +  HL     +R   GE  DD
Sbjct: 224 SLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHLLGYPFSRNSPGEKNDD 273

BLAST of MC05g1025 vs. NCBI nr
Match: XP_022147750.1 (Werner Syndrome-like exonuclease [Momordica charantia])

HSP 1 Score: 437 bits (1125), Expect = 7.71e-155
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0

Query: 1   MAISIVDHEIPSDSHNLYDVTIDSDQIHTLLTSSPAMVDSWISETLAIQTPPLIVGLDIE 60
           MAISIVDHEIPSDSHNLYDVTIDSDQIHTLLTSSPAMVDSWISETLAIQTPPLIVGLDIE
Sbjct: 1   MAISIVDHEIPSDSHNLYDVTIDSDQIHTLLTSSPAMVDSWISETLAIQTPPLIVGLDIE 60

Query: 61  WRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDVE 120
           WRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDVE
Sbjct: 61  WRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDVE 120

Query: 121 KLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDNE 180
           KLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDNE
Sbjct: 121 KLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDNE 180

Query: 181 WLVPNQVKYACVDAFLSSEIGRHLSNRRESGENVDDS 217
           WLVPNQVKYACVDAFLSSEIGRHLSNRRESGENVDDS
Sbjct: 181 WLVPNQVKYACVDAFLSSEIGRHLSNRRESGENVDDS 217

BLAST of MC05g1025 vs. NCBI nr
Match: XP_011652174.1 (Werner Syndrome-like exonuclease [Cucumis sativus] >KGN59430.1 hypothetical protein Csa_001395 [Cucumis sativus])

HSP 1 Score: 310 bits (793), Expect = 2.27e-104
Identity = 152/207 (73.43%), Postives = 174/207 (84.06%), Query Frame = 0

Query: 1   MAISIVDHEIPSDSHNLYDVTIDSDQ-IHTLLTSSPAMVDSWISETLAIQTPPLIVGLDI 60
           MAI+IVDHE+PSDSHN +D+T D+D+ I TLLT+SP+MVD WIS+TLAIQTPPL+VGLDI
Sbjct: 1   MAITIVDHEVPSDSHNYFDITFDTDEPILTLLTTSPSMVDGWISQTLAIQTPPLLVGLDI 60

Query: 61  EWRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDV 120
           EWRPN N SY+NPVATLQLC  RRCLI QL+H  EIP+SL +FL +ESFTFVGVGI ED 
Sbjct: 61  EWRPN-NRSYDNPVATLQLCIGRRCLILQLLHMPEIPKSLFEFLENESFTFVGVGIDEDA 120

Query: 121 EKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDN 180
           EKL CDYGL V   +DLR+LAE+  GRG+LKNAGLK L KEVLGKEI KPKSVTMSRWD 
Sbjct: 121 EKLNCDYGLKVGKRMDLRDLAESVTGRGELKNAGLKRLGKEVLGKEIHKPKSVTMSRWDQ 180

Query: 181 EWLVPNQVKYACVDAFLSSEIGRHLSN 206
           EWL  NQVKYAC+DAF S EIG+ L +
Sbjct: 181 EWLTLNQVKYACIDAFFSFEIGKFLQS 206

BLAST of MC05g1025 vs. NCBI nr
Match: XP_008443244.1 (PREDICTED: Werner Syndrome-like exonuclease [Cucumis melo] >ADN33882.1 3'-5' exonuclease [Cucumis melo subsp. melo] >KAA0053896.1 Werner Syndrome-like exonuclease [Cucumis melo var. makuwa] >TYK25510.1 Werner Syndrome-like exonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 308 bits (789), Expect = 9.22e-104
Identity = 151/207 (72.95%), Postives = 173/207 (83.57%), Query Frame = 0

Query: 1   MAISIVDHEIPSDSHNLYDVTIDSDQ-IHTLLTSSPAMVDSWISETLAIQTPPLIVGLDI 60
           M+I+IVDHE+PSDSHN +D+T D+D+ I TLLT+SP+MVD WIS+TL IQTPPL+VGLDI
Sbjct: 1   MSITIVDHEVPSDSHNYFDITFDNDEPILTLLTTSPSMVDDWISQTLTIQTPPLLVGLDI 60

Query: 61  EWRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDV 120
           EWRPN N SY+NPVATLQLC  RRCLI QL+H  EIP+SL +FL +ESFTFVGVGI ED 
Sbjct: 61  EWRPN-NRSYDNPVATLQLCIGRRCLILQLLHIPEIPKSLFEFLENESFTFVGVGIDEDA 120

Query: 121 EKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDN 180
           EKL CDYGL V   +DLR+LAE+  GRG+LKNAGLK L KEVLGKEI KPKSVTMSRWD 
Sbjct: 121 EKLNCDYGLKVGKRMDLRDLAESVTGRGELKNAGLKRLGKEVLGKEIHKPKSVTMSRWDQ 180

Query: 181 EWLVPNQVKYACVDAFLSSEIGRHLSN 206
           EWL  NQVKYAC+DAF S EIGR L +
Sbjct: 181 EWLTLNQVKYACIDAFFSFEIGRFLQS 206

BLAST of MC05g1025 vs. NCBI nr
Match: KAG6580879.1 (Werner Syndrome-like exonuclease, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017635.1 Werner Syndrome-like exonuclease, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288 bits (738), Expect = 5.33e-96
Identity = 147/205 (71.71%), Postives = 164/205 (80.00%), Query Frame = 0

Query: 1   MAISIVDHEIPSDSHNLYDVTIDSDQ-IHTLLTSSPAMVDSWISETLAIQTPPLIVGLDI 60
           MA++IVD E PS SHN +DVT +SD+ I TLLT SP MVD WISETL  QTPPLIVGLDI
Sbjct: 1   MALTIVDREDPSGSHNYFDVTFESDEPILTLLTISPLMVDDWISETLNTQTPPLIVGLDI 60

Query: 61  EWRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDV 120
           EWRPN  S YENPVATLQLC  RRCLI QLI+A E P+SL +FL +ES +FVGVGI  D 
Sbjct: 61  EWRPNIRS-YENPVATLQLCTGRRCLIVQLIYAPEFPKSLYEFLENESISFVGVGIEGDA 120

Query: 121 EKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDN 180
           EKL CDYGL V  TVDLRNLAE+  GR +LKNAGLK LAKE+LGKEI KP+ VT+SRWD 
Sbjct: 121 EKLNCDYGLKVRKTVDLRNLAESVTGRRELKNAGLKSLAKEILGKEIRKPRGVTLSRWDQ 180

Query: 181 EWLVPNQVKYACVDAFLSSEIGRHL 204
           EWL  NQ+KYAC DAF+S EIGRHL
Sbjct: 181 EWLTHNQIKYACFDAFVSYEIGRHL 204

BLAST of MC05g1025 vs. NCBI nr
Match: XP_023528000.1 (Werner Syndrome-like exonuclease [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287 bits (735), Expect = 1.52e-95
Identity = 147/205 (71.71%), Postives = 163/205 (79.51%), Query Frame = 0

Query: 1   MAISIVDHEIPSDSHNLYDVTIDSDQ-IHTLLTSSPAMVDSWISETLAIQTPPLIVGLDI 60
           MA++IVD E PS SHN +DVT DSD+ I TLLT SP MVD WISETL  QT PLIVGLDI
Sbjct: 1   MALTIVDREDPSGSHNYFDVTFDSDEPILTLLTISPLMVDDWISETLNTQTSPLIVGLDI 60

Query: 61  EWRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDV 120
           EWRPN  S YENPVATLQLC  RRCLI QLI+A E P+SL +FL +ES +FVGVGI  D 
Sbjct: 61  EWRPNIRS-YENPVATLQLCTGRRCLIVQLIYAPEFPKSLYEFLENESISFVGVGIEGDA 120

Query: 121 EKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDN 180
           EKL CDYGL V  TVDLRNLAE+  GR +LKNAGLK LAKE+LGKEI KP+ VT+SRWD 
Sbjct: 121 EKLNCDYGLKVRKTVDLRNLAESVTGRRELKNAGLKSLAKEILGKEIRKPRGVTLSRWDQ 180

Query: 181 EWLVPNQVKYACVDAFLSSEIGRHL 204
           EWL  NQ+KYAC DAF+S EIGRHL
Sbjct: 181 EWLTHNQIKYACFDAFISYEIGRHL 204

BLAST of MC05g1025 vs. ExPASy TrEMBL
Match: A0A6J1D107 (Werner Syndrome-like exonuclease OS=Momordica charantia OX=3673 GN=LOC111016613 PE=4 SV=1)

HSP 1 Score: 437 bits (1125), Expect = 3.73e-155
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0

Query: 1   MAISIVDHEIPSDSHNLYDVTIDSDQIHTLLTSSPAMVDSWISETLAIQTPPLIVGLDIE 60
           MAISIVDHEIPSDSHNLYDVTIDSDQIHTLLTSSPAMVDSWISETLAIQTPPLIVGLDIE
Sbjct: 1   MAISIVDHEIPSDSHNLYDVTIDSDQIHTLLTSSPAMVDSWISETLAIQTPPLIVGLDIE 60

Query: 61  WRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDVE 120
           WRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDVE
Sbjct: 61  WRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDVE 120

Query: 121 KLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDNE 180
           KLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDNE
Sbjct: 121 KLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDNE 180

Query: 181 WLVPNQVKYACVDAFLSSEIGRHLSNRRESGENVDDS 217
           WLVPNQVKYACVDAFLSSEIGRHLSNRRESGENVDDS
Sbjct: 181 WLVPNQVKYACVDAFLSSEIGRHLSNRRESGENVDDS 217

BLAST of MC05g1025 vs. ExPASy TrEMBL
Match: A0A0A0LBN3 (3'-5' exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819870 PE=4 SV=1)

HSP 1 Score: 310 bits (793), Expect = 1.10e-104
Identity = 152/207 (73.43%), Postives = 174/207 (84.06%), Query Frame = 0

Query: 1   MAISIVDHEIPSDSHNLYDVTIDSDQ-IHTLLTSSPAMVDSWISETLAIQTPPLIVGLDI 60
           MAI+IVDHE+PSDSHN +D+T D+D+ I TLLT+SP+MVD WIS+TLAIQTPPL+VGLDI
Sbjct: 1   MAITIVDHEVPSDSHNYFDITFDTDEPILTLLTTSPSMVDGWISQTLAIQTPPLLVGLDI 60

Query: 61  EWRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDV 120
           EWRPN N SY+NPVATLQLC  RRCLI QL+H  EIP+SL +FL +ESFTFVGVGI ED 
Sbjct: 61  EWRPN-NRSYDNPVATLQLCIGRRCLILQLLHMPEIPKSLFEFLENESFTFVGVGIDEDA 120

Query: 121 EKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDN 180
           EKL CDYGL V   +DLR+LAE+  GRG+LKNAGLK L KEVLGKEI KPKSVTMSRWD 
Sbjct: 121 EKLNCDYGLKVGKRMDLRDLAESVTGRGELKNAGLKRLGKEVLGKEIHKPKSVTMSRWDQ 180

Query: 181 EWLVPNQVKYACVDAFLSSEIGRHLSN 206
           EWL  NQVKYAC+DAF S EIG+ L +
Sbjct: 181 EWLTLNQVKYACIDAFFSFEIGKFLQS 206

BLAST of MC05g1025 vs. ExPASy TrEMBL
Match: A0A5A7UI20 (Werner Syndrome-like exonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006600 PE=4 SV=1)

HSP 1 Score: 308 bits (789), Expect = 4.46e-104
Identity = 151/207 (72.95%), Postives = 173/207 (83.57%), Query Frame = 0

Query: 1   MAISIVDHEIPSDSHNLYDVTIDSDQ-IHTLLTSSPAMVDSWISETLAIQTPPLIVGLDI 60
           M+I+IVDHE+PSDSHN +D+T D+D+ I TLLT+SP+MVD WIS+TL IQTPPL+VGLDI
Sbjct: 1   MSITIVDHEVPSDSHNYFDITFDNDEPILTLLTTSPSMVDDWISQTLTIQTPPLLVGLDI 60

Query: 61  EWRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDV 120
           EWRPN N SY+NPVATLQLC  RRCLI QL+H  EIP+SL +FL +ESFTFVGVGI ED 
Sbjct: 61  EWRPN-NRSYDNPVATLQLCIGRRCLILQLLHIPEIPKSLFEFLENESFTFVGVGIDEDA 120

Query: 121 EKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDN 180
           EKL CDYGL V   +DLR+LAE+  GRG+LKNAGLK L KEVLGKEI KPKSVTMSRWD 
Sbjct: 121 EKLNCDYGLKVGKRMDLRDLAESVTGRGELKNAGLKRLGKEVLGKEIHKPKSVTMSRWDQ 180

Query: 181 EWLVPNQVKYACVDAFLSSEIGRHLSN 206
           EWL  NQVKYAC+DAF S EIGR L +
Sbjct: 181 EWLTLNQVKYACIDAFFSFEIGRFLQS 206

BLAST of MC05g1025 vs. ExPASy TrEMBL
Match: E5GBP0 (3'-5' exonuclease OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 308 bits (789), Expect = 4.46e-104
Identity = 151/207 (72.95%), Postives = 173/207 (83.57%), Query Frame = 0

Query: 1   MAISIVDHEIPSDSHNLYDVTIDSDQ-IHTLLTSSPAMVDSWISETLAIQTPPLIVGLDI 60
           M+I+IVDHE+PSDSHN +D+T D+D+ I TLLT+SP+MVD WIS+TL IQTPPL+VGLDI
Sbjct: 1   MSITIVDHEVPSDSHNYFDITFDNDEPILTLLTTSPSMVDDWISQTLTIQTPPLLVGLDI 60

Query: 61  EWRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDV 120
           EWRPN N SY+NPVATLQLC  RRCLI QL+H  EIP+SL +FL +ESFTFVGVGI ED 
Sbjct: 61  EWRPN-NRSYDNPVATLQLCIGRRCLILQLLHIPEIPKSLFEFLENESFTFVGVGIDEDA 120

Query: 121 EKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDN 180
           EKL CDYGL V   +DLR+LAE+  GRG+LKNAGLK L KEVLGKEI KPKSVTMSRWD 
Sbjct: 121 EKLNCDYGLKVGKRMDLRDLAESVTGRGELKNAGLKRLGKEVLGKEIHKPKSVTMSRWDQ 180

Query: 181 EWLVPNQVKYACVDAFLSSEIGRHLSN 206
           EWL  NQVKYAC+DAF S EIGR L +
Sbjct: 181 EWLTLNQVKYACIDAFFSFEIGRFLQS 206

BLAST of MC05g1025 vs. ExPASy TrEMBL
Match: A0A1S3B738 (Werner Syndrome-like exonuclease OS=Cucumis melo OX=3656 GN=LOC103486879 PE=4 SV=1)

HSP 1 Score: 308 bits (789), Expect = 4.46e-104
Identity = 151/207 (72.95%), Postives = 173/207 (83.57%), Query Frame = 0

Query: 1   MAISIVDHEIPSDSHNLYDVTIDSDQ-IHTLLTSSPAMVDSWISETLAIQTPPLIVGLDI 60
           M+I+IVDHE+PSDSHN +D+T D+D+ I TLLT+SP+MVD WIS+TL IQTPPL+VGLDI
Sbjct: 1   MSITIVDHEVPSDSHNYFDITFDNDEPILTLLTTSPSMVDDWISQTLTIQTPPLLVGLDI 60

Query: 61  EWRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDV 120
           EWRPN N SY+NPVATLQLC  RRCLI QL+H  EIP+SL +FL +ESFTFVGVGI ED 
Sbjct: 61  EWRPN-NRSYDNPVATLQLCIGRRCLILQLLHIPEIPKSLFEFLENESFTFVGVGIDEDA 120

Query: 121 EKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDN 180
           EKL CDYGL V   +DLR+LAE+  GRG+LKNAGLK L KEVLGKEI KPKSVTMSRWD 
Sbjct: 121 EKLNCDYGLKVGKRMDLRDLAESVTGRGELKNAGLKRLGKEVLGKEIHKPKSVTMSRWDQ 180

Query: 181 EWLVPNQVKYACVDAFLSSEIGRHLSN 206
           EWL  NQVKYAC+DAF S EIGR L +
Sbjct: 181 EWLTLNQVKYACIDAFFSFEIGRFLQS 206

BLAST of MC05g1025 vs. TAIR 10
Match: AT4G13870.1 (Werner syndrome-like exonuclease )

HSP 1 Score: 99.4 bits (246), Expect = 3.8e-21
Identity = 58/152 (38.16%), Postives = 85/152 (55.92%), Query Frame = 0

Query: 55  VGLDIEWRPN-RNSSYENPVATLQLCFDRR-CLIFQLIHASEIPRSLTDFLTDESFTFVG 114
           VGLDIEWRP+ R       VAT+Q+C D   C +  + H S IP+SL   + D +   VG
Sbjct: 130 VGLDIEWRPSFRKGVLPGKVATVQICVDSNYCDVMHIFH-SGIPQSLQHLIEDSTLVKVG 189

Query: 115 VGIGEDVEKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSV 174
           +GI  D  KL  DYG+++ +  DL +LA   +G GD K  GL  L + ++ KE+ KP  +
Sbjct: 190 IGIDGDSVKLFHDYGVSIKDVEDLSDLANQKIG-GD-KKWGLASLTETLVCKELLKPNRI 249

Query: 175 TMSRWDNEWLVPNQVKYACVDAFLSSEIGRHL 205
            +  W+   L   Q++YA  DA+ S  + + L
Sbjct: 250 RLGNWEFYPLSKQQLQYAATDAYASWHLYKDL 278

BLAST of MC05g1025 vs. TAIR 10
Match: AT4G13870.2 (Werner syndrome-like exonuclease )

HSP 1 Score: 98.6 bits (244), Expect = 6.6e-21
Identity = 57/145 (39.31%), Postives = 82/145 (56.55%), Query Frame = 0

Query: 55  VGLDIEWRPN-RNSSYENPVATLQLCFDRR-CLIFQLIHASEIPRSLTDFLTDESFTFVG 114
           VGLDIEWRP+ R       VAT+Q+C D   C +  + H S IP+SL   + D +   VG
Sbjct: 130 VGLDIEWRPSFRKGVLPGKVATVQICVDSNYCDVMHIFH-SGIPQSLQHLIEDSTLVKVG 189

Query: 115 VGIGEDVEKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSV 174
           +GI  D  KL  DYG+++ +  DL +LA   +G GD K  GL  L + ++ KE+ KP  +
Sbjct: 190 IGIDGDSVKLFHDYGVSIKDVEDLSDLANQKIG-GD-KKWGLASLTETLVCKELLKPNRI 249

Query: 175 TMSRWDNEWLVPNQVKYACVDAFLS 198
            +  W+   L   Q++YA  DA+ S
Sbjct: 250 RLGNWEFYPLSKQQLQYAATDAYAS 271

BLAST of MC05g1025 vs. TAIR 10
Match: AT3G12460.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.5e-17
Identity = 56/209 (26.79%), Postives = 96/209 (45.93%), Query Frame = 0

Query: 18  YDVTIDSDQIHTLLTSSPAMVDSWISETL---AIQTPPLIVGLDIEWRP----------- 77
           Y V    +++   +T  P+++  WI +      + + PL+VG+ ++W P           
Sbjct: 17  YSVDFFGEELFVTVTPDPSVIGQWIHDVFFHNRLSSHPLVVGVGVQWTPSGYHPASPPVS 76

Query: 78  ----NRNSSYEN-----------PVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESF 137
               +   SY +           P  TLQLC   RC+I QL +   +P+ L +FL D   
Sbjct: 77  YRSDSSPDSYRSDSPPVFYSSDPPADTLQLCVGNRCIIIQLRYCERVPQVLRNFLADRDN 136

Query: 138 TFVGVGIGEDVEKL-LCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLG-KEI 196
           TFVG+   +D  KL    + L ++  +DLR    ++ GR  + N  L+ + +E LG   +
Sbjct: 137 TFVGIWNSQDAGKLERSRHQLEIAELMDLREFVSDSSGRRSMYNYSLEKIVEENLGYPGV 196

BLAST of MC05g1025 vs. TAIR 10
Match: AT3G12430.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 5.7e-17
Identity = 56/209 (26.79%), Postives = 95/209 (45.45%), Query Frame = 0

Query: 18  YDVTIDSDQIHTLLTSSPAMVDSWISETLA---IQTPPLIVGLDIEWRPNRNSSYENPVA 77
           Y V    ++   ++T  P+++  WI + L+     + PL+VG+ ++W P+   S  +PV 
Sbjct: 17  YLVDFFGEEFIVIVTPDPSVIGQWIHDVLSHNRFSSHPLVVGVGVQWTPSSYYSASSPVR 76

Query: 78  --------------------------TLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESF 137
                                     TLQLC   RC+I QL H   +P+ L +FL D  +
Sbjct: 77  YRSDSPPVRYRSDSPRVRRRFDPPADTLQLCVGNRCIIIQLSHCERVPQVLRNFLADRDY 136

Query: 138 TFVGVGIGEDVEKL-LCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKE-I 196
           TFVG+   +D  KL    + L ++  +DLR    ++ GR  +K    + + +E LG   +
Sbjct: 137 TFVGIWNSQDAGKLKRSKHELEIAVLLDLRKFVSDSSGR-TMKRCSFEKIVEENLGHSGV 196

BLAST of MC05g1025 vs. TAIR 10
Match: AT3G12470.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-16
Identity = 55/189 (29.10%), Postives = 95/189 (50.26%), Query Frame = 0

Query: 14  SHNLYDVTIDSDQIHTLLTSSPAMVDSWISETLAI----QTPPLIVGLDIEWRPNRNSSY 73
           +H  + V    D +   +T + +++  WI    +        PL+VG+ ++WRP+ +S  
Sbjct: 13  THQKHFVDFFGDDLIVTVTPTASVIRRWIRSVRSYNRNHSVHPLVVGIGVQWRPD-SSDP 72

Query: 74  ENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDVEKL-LCDYGL 133
           + P  TLQLC   RCLI QL +   +P+ L  FL D   TFVGV  G+D +KL  C + +
Sbjct: 73  DPPPKTLQLCVGSRCLIIQLGYNYGLPKVLRTFLADPKTTFVGVWNGQDQKKLEKCRHRV 132

Query: 134 NVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGK-EISKPKSVTMSRWDNEWLVPNQV 193
            +   +D+R    ++ G   +     + + KE LG+  +    ++ MS W    L   QV
Sbjct: 133 EIGKLLDIRMFVRDSRG-ARMCFCSFEQIVKERLGRVGVRLDPAICMSDWGVYNLNHYQV 192

Query: 194 KYACVDAFL 197
             A +++++
Sbjct: 193 LQASIESYV 199

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q84LH39.2e-2039.31Werner Syndrome-like exonuclease OS=Arabidopsis thaliana OX=3702 GN=WEX PE=1 SV=... [more]
O090531.5e-1732.00Werner syndrome ATP-dependent helicase homolog OS=Mus musculus OX=10090 GN=Wrn P... [more]
Q141914.7e-1632.34Werner syndrome ATP-dependent helicase OS=Homo sapiens OX=9606 GN=WRN PE=1 SV=2[more]
Q9VGN78.1e-1635.29Exonuclease 3'-5' domain-containing protein 2 OS=Drosophila melanogaster OX=7227... [more]
Q9NVH01.8e-1534.88Exonuclease 3'-5' domain-containing protein 2 OS=Homo sapiens OX=9606 GN=EXD2 PE... [more]
Match NameE-valueIdentityDescription
XP_022147750.17.71e-155100.00Werner Syndrome-like exonuclease [Momordica charantia][more]
XP_011652174.12.27e-10473.43Werner Syndrome-like exonuclease [Cucumis sativus] >KGN59430.1 hypothetical prot... [more]
XP_008443244.19.22e-10472.95PREDICTED: Werner Syndrome-like exonuclease [Cucumis melo] >ADN33882.1 3'-5' exo... [more]
KAG6580879.15.33e-9671.71Werner Syndrome-like exonuclease, partial [Cucurbita argyrosperma subsp. sororia... [more]
XP_023528000.11.52e-9571.71Werner Syndrome-like exonuclease [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A0A6J1D1073.73e-155100.00Werner Syndrome-like exonuclease OS=Momordica charantia OX=3673 GN=LOC111016613 ... [more]
A0A0A0LBN31.10e-10473.433'-5' exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G... [more]
A0A5A7UI204.46e-10472.95Werner Syndrome-like exonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
E5GBP04.46e-10472.953'-5' exonuclease OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A1S3B7384.46e-10472.95Werner Syndrome-like exonuclease OS=Cucumis melo OX=3656 GN=LOC103486879 PE=4 SV... [more]
Match NameE-valueIdentityDescription
AT4G13870.13.8e-2138.16Werner syndrome-like exonuclease [more]
AT4G13870.26.6e-2139.31Werner syndrome-like exonuclease [more]
AT3G12460.11.5e-1726.79Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT3G12430.15.7e-1726.79Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT3G12470.12.2e-1629.10Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainSMARTSM0047435exoneu6coord: 35..209
e-value: 5.1E-11
score: 52.6
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 38..205
e-value: 8.8E-19
score: 67.9
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 14..206
e-value: 6.7E-59
score: 200.8
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 9..208
NoneNo IPR availablePANTHERPTHR13620:SF65OS01G0660800 PROTEINcoord: 9..208
NoneNo IPR availableCDDcd06141WRN_exocoord: 32..204
e-value: 2.73878E-68
score: 205.12
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 48..205

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g1025.1MC05g1025.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006139 nucleobase-containing compound metabolic process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003676 nucleic acid binding