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MC05g1025 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5CDSpolypeptideutr3 Hold the cursor over a type above to highlight its positions in the sequence below.GTGACAACGATTTTAGATAGTGTGGGGACAATGATTAAACACGTGGCAATGTTTCTTTCGCGGATTTTAAAAAACGTGATCTGTGAGAAGTTTGGATGGTGTGAAAATTTTGGATTGTTTCAAATTCAAAACATAAGTAAAATATGAGGTTAAAAGTTTGGTGAAATGGTTGAGTGGAAGTTAATGTATATTCGTCTTTTCACTAAAGGTGGGTTCAAAATTAAGTAGGGGTGAGGTCAAAAATTAGGTTTTTTTAAAATTGGTTCATTTATCCAATTTGAACTATTGTGGGGTTCAAAACCCCAATTTCCCAAGGTTTAAAAAGTTTTCAAGGGTATTTTGGTCCAATAAATAAACTTGGGGCGATTTAGAACTCAGTCTTCTCTTCAGTCTTCTCTTCGTTTTCAAGAAAACAGAATCTCTCTTCTCTCTGTGTCTCCGCCATGGCTATCAGCATCGTCGACCACGAAATTCCCTCCGATTCCCACAATTTGTACGACGTTACCATTGATTCCGATCAGATTCACACTCTCCTCACATCTTCTCCGGCCATGGTCGATTCCTGGATCTCTGAAACCCTCGCCATTCAGACTCCACCTCTCATCGTTGGTCTCGACATCGAGTGGCGCCCTAACAGAAATAGCTCTTACGAAAACCCCGTCGCCACACTGCAACTCTGTTTCGATCGCCGATGCCTCATTTTTCAACTCATTCACGCCTCCGAGATCCCTCGCTCTCTGACCGATTTCTTGACCGACGAGTCCTTCACCTTCGTCGGAGTCGGAATCGGCGAGGACGTCGAGAAGCTCCTCTGCGATTACGGCTTGAACGTGAGCAACACTGTGGATCTGAGGAATTTGGCCGAGAATGCGATGGGAAGAGGAGATCTGAAGAATGCGGGATTGAAGGGCTTGGCGAAAGAGGTTCTTGGAAAGGAGATTTCTAAGCCGAAGAGCGTGACGATGAGTCGGTGGGATAATGAATGGCTGGTTCCCAATCAGGTGAAATATGCTTGCGTTGATGCGTTTCTGTCATCTGAGATTGGAAGGCATCTTTCCAATCGAAGGGAATCAGGGGAAAATGTTGATGATTCCTAGGGTTCTTTCTGTTTCATGGATTTTGTGCAGCAGACTTGGATCACCAATTGTAGCATTTCGATTTCCGTTTCTCTTCTCAGTTATGACTTCCAAATATCAGATTTGAAGAATATGGGTTCTTTGATTGTGTAATCTTTATTCCCTGGTCTTCTTTCTCTTTCTCTTTCAAATGCTTTTGCAATCTCAAATCAAAATTTAACACCATGTGGTTTGAGAATTGTTCCGAGTCGTTTATTCAGAGACTGCTTTCTTGTAGTTTGGATTTTTCTTTCAATGTCAACATCAGTCTTACGGGATATTTTTTAATTTGTCCAAAATTGAAGAAAAGTATCTTACAGTGCAGGTTTGATTGATACG GTGACAACGATTTTAGATAGTGTGGGGACAATGATTAAACACGTGGCAATGTTTCTTTCGCGGATTTTAAAAAACGTGATCTGTGAGAAGTTTGGATGGTGTGAAAATTTTGGATTGTTTCAAATTCAAAACATAAGTAAAATATGAGGTTAAAAGTTTGGTGAAATGGTTGAGTGGAAGTTAATGTATATTCGTCTTTTCACTAAAGGTGGGTTCAAAATTAAGTAGGGGTGAGGTCAAAAATTAGGTTTTTTTAAAATTGGTTCATTTATCCAATTTGAACTATTGTGGGGTTCAAAACCCCAATTTCCCAAGGTTTAAAAAGTTTTCAAGGGTATTTTGGTCCAATAAATAAACTTGGGGCGATTTAGAACTCAGTCTTCTCTTCAGTCTTCTCTTCGTTTTCAAGAAAACAGAATCTCTCTTCTCTCTGTGTCTCCGCCATGGCTATCAGCATCGTCGACCACGAAATTCCCTCCGATTCCCACAATTTGTACGACGTTACCATTGATTCCGATCAGATTCACACTCTCCTCACATCTTCTCCGGCCATGGTCGATTCCTGGATCTCTGAAACCCTCGCCATTCAGACTCCACCTCTCATCGTTGGTCTCGACATCGAGTGGCGCCCTAACAGAAATAGCTCTTACGAAAACCCCGTCGCCACACTGCAACTCTGTTTCGATCGCCGATGCCTCATTTTTCAACTCATTCACGCCTCCGAGATCCCTCGCTCTCTGACCGATTTCTTGACCGACGAGTCCTTCACCTTCGTCGGAGTCGGAATCGGCGAGGACGTCGAGAAGCTCCTCTGCGATTACGGCTTGAACGTGAGCAACACTGTGGATCTGAGGAATTTGGCCGAGAATGCGATGGGAAGAGGAGATCTGAAGAATGCGGGATTGAAGGGCTTGGCGAAAGAGGTTCTTGGAAAGGAGATTTCTAAGCCGAAGAGCGTGACGATGAGTCGGTGGGATAATGAATGGCTGGTTCCCAATCAGGTGAAATATGCTTGCGTTGATGCGTTTCTGTCATCTGAGATTGGAAGGCATCTTTCCAATCGAAGGGAATCAGGGGAAAATGTTGATGATTCCTAGGGTTCTTTCTGTTTCATGGATTTTGTGCAGCAGACTTGGATCACCAATTGTAGCATTTCGATTTCCGTTTCTCTTCTCAGTTATGACTTCCAAATATCAGATTTGAAGAATATGGGTTCTTTGATTGTGTAATCTTTATTCCCTGGTCTTCTTTCTCTTTCTCTTTCAAATGCTTTTGCAATCTCAAATCAAAATTTAACACCATGTGGTTTGAGAATTGTTCCGAGTCGTTTATTCAGAGACTGCTTTCTTGTAGTTTGGATTTTTCTTTCAATGTCAACATCAGTCTTACGGGATATTTTTTAATTTGTCCAAAATTGAAGAAAAGTATCTTACAGTGCAGGTTTGATTGATACG ATGGCTATCAGCATCGTCGACCACGAAATTCCCTCCGATTCCCACAATTTGTACGACGTTACCATTGATTCCGATCAGATTCACACTCTCCTCACATCTTCTCCGGCCATGGTCGATTCCTGGATCTCTGAAACCCTCGCCATTCAGACTCCACCTCTCATCGTTGGTCTCGACATCGAGTGGCGCCCTAACAGAAATAGCTCTTACGAAAACCCCGTCGCCACACTGCAACTCTGTTTCGATCGCCGATGCCTCATTTTTCAACTCATTCACGCCTCCGAGATCCCTCGCTCTCTGACCGATTTCTTGACCGACGAGTCCTTCACCTTCGTCGGAGTCGGAATCGGCGAGGACGTCGAGAAGCTCCTCTGCGATTACGGCTTGAACGTGAGCAACACTGTGGATCTGAGGAATTTGGCCGAGAATGCGATGGGAAGAGGAGATCTGAAGAATGCGGGATTGAAGGGCTTGGCGAAAGAGGTTCTTGGAAAGGAGATTTCTAAGCCGAAGAGCGTGACGATGAGTCGGTGGGATAATGAATGGCTGGTTCCCAATCAGGTGAAATATGCTTGCGTTGATGCGTTTCTGTCATCTGAGATTGGAAGGCATCTTTCCAATCGAAGGGAATCAGGGGAAAATGTTGATGATTCCTAG MAISIVDHEIPSDSHNLYDVTIDSDQIHTLLTSSPAMVDSWISETLAIQTPPLIVGLDIEWRPNRNSSYENPVATLQLCFDRRCLIFQLIHASEIPRSLTDFLTDESFTFVGVGIGEDVEKLLCDYGLNVSNTVDLRNLAENAMGRGDLKNAGLKGLAKEVLGKEISKPKSVTMSRWDNEWLVPNQVKYACVDAFLSSEIGRHLSNRRESGENVDDS Homology
BLAST of MC05g1025 vs. ExPASy Swiss-Prot
Match: Q84LH3 (Werner Syndrome-like exonuclease OS=Arabidopsis thaliana OX=3702 GN=WEX PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 9.2e-20 Identity = 57/145 (39.31%), Postives = 82/145 (56.55%), Query Frame = 0
BLAST of MC05g1025 vs. ExPASy Swiss-Prot
Match: O09053 (Werner syndrome ATP-dependent helicase homolog OS=Mus musculus OX=10090 GN=Wrn PE=1 SV=3) HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17 Identity = 56/175 (32.00%), Postives = 92/175 (52.57%), Query Frame = 0
BLAST of MC05g1025 vs. ExPASy Swiss-Prot
Match: Q14191 (Werner syndrome ATP-dependent helicase OS=Homo sapiens OX=9606 GN=WRN PE=1 SV=2) HSP 1 Score: 86.3 bits (212), Expect = 4.7e-16 Identity = 54/167 (32.34%), Postives = 86/167 (51.50%), Query Frame = 0
BLAST of MC05g1025 vs. ExPASy Swiss-Prot
Match: Q9VGN7 (Exonuclease 3'-5' domain-containing protein 2 OS=Drosophila melanogaster OX=7227 GN=Exd2 PE=2 SV=2) HSP 1 Score: 85.5 bits (210), Expect = 8.1e-16 Identity = 60/170 (35.29%), Postives = 83/170 (48.82%), Query Frame = 0
BLAST of MC05g1025 vs. ExPASy Swiss-Prot
Match: Q9NVH0 (Exonuclease 3'-5' domain-containing protein 2 OS=Homo sapiens OX=9606 GN=EXD2 PE=1 SV=2) HSP 1 Score: 84.3 bits (207), Expect = 1.8e-15 Identity = 60/172 (34.88%), Postives = 82/172 (47.67%), Query Frame = 0
BLAST of MC05g1025 vs. NCBI nr
Match: XP_022147750.1 (Werner Syndrome-like exonuclease [Momordica charantia]) HSP 1 Score: 437 bits (1125), Expect = 7.71e-155 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of MC05g1025 vs. NCBI nr
Match: XP_011652174.1 (Werner Syndrome-like exonuclease [Cucumis sativus] >KGN59430.1 hypothetical protein Csa_001395 [Cucumis sativus]) HSP 1 Score: 310 bits (793), Expect = 2.27e-104 Identity = 152/207 (73.43%), Postives = 174/207 (84.06%), Query Frame = 0
BLAST of MC05g1025 vs. NCBI nr
Match: XP_008443244.1 (PREDICTED: Werner Syndrome-like exonuclease [Cucumis melo] >ADN33882.1 3'-5' exonuclease [Cucumis melo subsp. melo] >KAA0053896.1 Werner Syndrome-like exonuclease [Cucumis melo var. makuwa] >TYK25510.1 Werner Syndrome-like exonuclease [Cucumis melo var. makuwa]) HSP 1 Score: 308 bits (789), Expect = 9.22e-104 Identity = 151/207 (72.95%), Postives = 173/207 (83.57%), Query Frame = 0
BLAST of MC05g1025 vs. NCBI nr
Match: KAG6580879.1 (Werner Syndrome-like exonuclease, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017635.1 Werner Syndrome-like exonuclease, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 288 bits (738), Expect = 5.33e-96 Identity = 147/205 (71.71%), Postives = 164/205 (80.00%), Query Frame = 0
BLAST of MC05g1025 vs. NCBI nr
Match: XP_023528000.1 (Werner Syndrome-like exonuclease [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287 bits (735), Expect = 1.52e-95 Identity = 147/205 (71.71%), Postives = 163/205 (79.51%), Query Frame = 0
BLAST of MC05g1025 vs. ExPASy TrEMBL
Match: A0A6J1D107 (Werner Syndrome-like exonuclease OS=Momordica charantia OX=3673 GN=LOC111016613 PE=4 SV=1) HSP 1 Score: 437 bits (1125), Expect = 3.73e-155 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of MC05g1025 vs. ExPASy TrEMBL
Match: A0A0A0LBN3 (3'-5' exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819870 PE=4 SV=1) HSP 1 Score: 310 bits (793), Expect = 1.10e-104 Identity = 152/207 (73.43%), Postives = 174/207 (84.06%), Query Frame = 0
BLAST of MC05g1025 vs. ExPASy TrEMBL
Match: A0A5A7UI20 (Werner Syndrome-like exonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006600 PE=4 SV=1) HSP 1 Score: 308 bits (789), Expect = 4.46e-104 Identity = 151/207 (72.95%), Postives = 173/207 (83.57%), Query Frame = 0
BLAST of MC05g1025 vs. ExPASy TrEMBL
Match: E5GBP0 (3'-5' exonuclease OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 308 bits (789), Expect = 4.46e-104 Identity = 151/207 (72.95%), Postives = 173/207 (83.57%), Query Frame = 0
BLAST of MC05g1025 vs. ExPASy TrEMBL
Match: A0A1S3B738 (Werner Syndrome-like exonuclease OS=Cucumis melo OX=3656 GN=LOC103486879 PE=4 SV=1) HSP 1 Score: 308 bits (789), Expect = 4.46e-104 Identity = 151/207 (72.95%), Postives = 173/207 (83.57%), Query Frame = 0
BLAST of MC05g1025 vs. TAIR 10
Match: AT4G13870.1 (Werner syndrome-like exonuclease ) HSP 1 Score: 99.4 bits (246), Expect = 3.8e-21 Identity = 58/152 (38.16%), Postives = 85/152 (55.92%), Query Frame = 0
BLAST of MC05g1025 vs. TAIR 10
Match: AT4G13870.2 (Werner syndrome-like exonuclease ) HSP 1 Score: 98.6 bits (244), Expect = 6.6e-21 Identity = 57/145 (39.31%), Postives = 82/145 (56.55%), Query Frame = 0
BLAST of MC05g1025 vs. TAIR 10
Match: AT3G12460.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 87.4 bits (215), Expect = 1.5e-17 Identity = 56/209 (26.79%), Postives = 96/209 (45.93%), Query Frame = 0
BLAST of MC05g1025 vs. TAIR 10
Match: AT3G12430.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 85.5 bits (210), Expect = 5.7e-17 Identity = 56/209 (26.79%), Postives = 95/209 (45.45%), Query Frame = 0
BLAST of MC05g1025 vs. TAIR 10
Match: AT3G12470.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 83.6 bits (205), Expect = 2.2e-16 Identity = 55/189 (29.10%), Postives = 95/189 (50.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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