MC05g0973 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0973
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Short-chain dehydrogenase/reductase family protein
Location	MC05: 10646319 .. 10646495 (-)
RNA-Seq Expression	MC05g0973
Synteny	MC05g0973

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGCCGTATTACCCCTAAAAGACCAAGTGGCCATTGTTACACGAACTTATCACGGCATTAGCAGAGCCATCGCCCTCCACTTGGCCTCCCTCGACGCCAGAGTCCTCATCAACTACCTCTCCTACTCAACCGAAGCCCAACTCCTGGCTTCCCAAATCAACTCCTCCTCCCCCGGT

mRNA sequence

TCAGCCGTATTACCCCTAAAAGACCAAGTGGCCATTGTTACACGAACTTATCACGGCATTAGCAGAGCCATCGCCCTCCACTTGGCCTCCCTCGACGCCAGAGTCCTCATCAACTACCTCTCCTACTCAACCGAAGCCCAACTCCTGGCTTCCCAAATCAACTCCTCCTCCCCCGGT

Coding sequence (CDS)

TCAGCCGTATTACCCCTAAAAGACCAAGTGGCCATTGTTACACGAACTTATCACGGCATTAGCAGAGCCATCGCCCTCCACTTGGCCTCCCTCGACGCCAGAGTCCTCATCAACTACCTCTCCTACTCAACCGAAGCCCAACTCCTGGCTTCCCAAATCAACTCCTCCTCCCCCGGT

Protein sequence

SAVLPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSSSPG

Homology

[Close]

BLAST of MC05g0973 vs. ExPASy Swiss-Prot
Match: Q9SQR4 (NADPH-dependent aldehyde reductase-like protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g03980 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-07
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 4  LPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQIN 55
          LPL  +VAIVT +  GI RAIA+HLA L AR++INY S + +A+ +AS+IN
Sbjct: 12 LPLAGRVAIVTGSSRGIGRAIAIHLAELGARIVINYTSKAADAERVASEIN 62

[Close]

BLAST of MC05g0973 vs. ExPASy Swiss-Prot
Match: Q9SQR2 (NADPH-dependent aldehyde reductase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ChlADR2 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 6.6e-05
Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 1  SAVLPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSS 57
          S  L L  +VAIVT +  GI RAIA+HLA L ARV++NY +   EA+ +A+ I ++
Sbjct: 9  SPPLCLAGRVAIVTGSSRGIGRAIAIHLAELGARVVVNYSTSPVEAEKVATAITTN 64

[Close]

BLAST of MC05g0973 vs. ExPASy Swiss-Prot
Match: Q08632 (Short-chain type dehydrogenase/reductase OS=Picea abies OX=3329 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 3.3e-04
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0


Query: 4  LPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSSSP 59
          LPL  +VAIVT    GI R IAL++A   A+V+I+Y S    A+ +AS IN+ SP
Sbjct: 17 LPLGGRVAIVTGASRGIGREIALNMAEKGAKVVIHYSSNQHAAEEVASIINNKSP 71

[Close]

BLAST of MC05g0973 vs. NCBI nr
Match: XP_016903366.1 (PREDICTED: short-chain type dehydrogenase/reductase-like isoform X2 [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 2.03e-15
Identity = 39/59 (66.10%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1  SAVLPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSSSPG 59
          SA+LPL+D+VA+VT    GI +AIALHLASL A++LINY+S S++A L+ASQINSS PG
Sbjct: 11 SAILPLRDRVAVVTGASRGIGKAIALHLASLGAKLLINYVSNSSQANLVASQINSSFPG 69

[Close]

BLAST of MC05g0973 vs. NCBI nr
Match: KAA0051279.1 (short-chain type dehydrogenase/reductase-like isoform X1 [Cucumis melo var. makuwa] >TYK29982.1 short-chain type dehydrogenase/reductase-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 2.24e-15
Identity = 39/59 (66.10%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1  SAVLPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSSSPG 59
          SA+LPL+D+VA+VT    GI +AIALHLASL A++LINY+S S++A L+ASQINSS PG
Sbjct: 11 SAILPLRDRVAVVTGASRGIGKAIALHLASLGAKLLINYVSNSSQANLVASQINSSFPG 69

[Close]

BLAST of MC05g0973 vs. NCBI nr
Match: XP_016903365.1 (PREDICTED: short-chain type dehydrogenase/reductase-like isoform X1 [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 3.18e-15
Identity = 39/59 (66.10%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1  SAVLPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSSSPG 59
          SA+LPL+D+VA+VT    GI +AIALHLASL A++LINY+S S++A L+ASQINSS PG
Sbjct: 11 SAILPLRDRVAVVTGASRGIGKAIALHLASLGAKLLINYVSNSSQANLVASQINSSFPG 69

[Close]

BLAST of MC05g0973 vs. NCBI nr
Match: XP_004141140.1 (NADPH-dependent aldehyde reductase-like protein, chloroplastic [Cucumis sativus] >KGN59762.1 hypothetical protein Csa_000736 [Cucumis sativus])

HSP 1 Score: 75.5 bits (184), Expect = 1.57e-14
Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1  SAVLPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSSSPG 59
          SA+LPLKD+VAIVT    GI +AIALHLASL A++LINY+S +++A L+ASQINSS PG
Sbjct: 6  SAILPLKDRVAIVTGASRGIGKAIALHLASLGAKLLINYVSNTSQADLVASQINSSFPG 64

[Close]

BLAST of MC05g0973 vs. NCBI nr
Match: KAF5954055.1 (hypothetical protein HYC85_006911 [Camellia sinensis])

HSP 1 Score: 66.6 bits (161), Expect = 3.50e-11
Identity = 36/54 (66.67%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 4  LPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSSS 57
          LPL+D+VAIVT    GI RAIALHLASL A+++INY S S++A+L+ASQINS+S
Sbjct: 12 LPLQDRVAIVTGGSRGIGRAIALHLASLGAKIVINYSSNSSQAELVASQINSNS 65

[Close]

BLAST of MC05g0973 vs. ExPASy TrEMBL
Match: A0A1S4E556 (short-chain type dehydrogenase/reductase-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502973 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.84e-16
Identity = 39/59 (66.10%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1  SAVLPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSSSPG 59
          SA+LPL+D+VA+VT    GI +AIALHLASL A++LINY+S S++A L+ASQINSS PG
Sbjct: 11 SAILPLRDRVAVVTGASRGIGKAIALHLASLGAKLLINYVSNSSQANLVASQINSSFPG 69

[Close]

BLAST of MC05g0973 vs. ExPASy TrEMBL
Match: A0A5D3E264 (Short-chain type dehydrogenase/reductase-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G00110 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.08e-15
Identity = 39/59 (66.10%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1  SAVLPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSSSPG 59
          SA+LPL+D+VA+VT    GI +AIALHLASL A++LINY+S S++A L+ASQINSS PG
Sbjct: 11 SAILPLRDRVAVVTGASRGIGKAIALHLASLGAKLLINYVSNSSQANLVASQINSSFPG 69

[Close]

BLAST of MC05g0973 vs. ExPASy TrEMBL
Match: A0A1S4E5W5 (short-chain type dehydrogenase/reductase-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502973 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.54e-15
Identity = 39/59 (66.10%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1  SAVLPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSSSPG 59
          SA+LPL+D+VA+VT    GI +AIALHLASL A++LINY+S S++A L+ASQINSS PG
Sbjct: 11 SAILPLRDRVAVVTGASRGIGKAIALHLASLGAKLLINYVSNSSQANLVASQINSSFPG 69

[Close]

BLAST of MC05g0973 vs. ExPASy TrEMBL
Match: A0A0A0LG97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G843810 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.58e-15
Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1  SAVLPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSSSPG 59
          SA+LPLKD+VAIVT    GI +AIALHLASL A++LINY+S +++A L+ASQINSS PG
Sbjct: 6  SAILPLKDRVAIVTGASRGIGKAIALHLASLGAKLLINYVSNTSQADLVASQINSSFPG 64

[Close]

BLAST of MC05g0973 vs. ExPASy TrEMBL
Match: A0A7J7HNB9 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_006911 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.69e-11
Identity = 36/54 (66.67%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 4  LPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSSS 57
          LPL+D+VAIVT    GI RAIALHLASL A+++INY S S++A+L+ASQINS+S
Sbjct: 12 LPLQDRVAIVTGGSRGIGRAIALHLASLGAKIVINYSSNSSQAELVASQINSNS 65

[Close]

BLAST of MC05g0973 vs. TAIR 10
Match: AT4G13180.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 2.0e-09
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 1  SAVLPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSSS 58
          S+ LPL  +VAIVT    G+ R IA+HL SL ARV INY+S S++A+LL S++N SS
Sbjct: 8  SSSLPLAGRVAIVTGATRGMGREIAIHLHSLGARVTINYVSSSSKAELLVSELNDSS 64

[Close]

BLAST of MC05g0973 vs. TAIR 10
Match: AT5G18210.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 4.6e-09
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0


Query: 1  SAVLPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSSS 58
          S+V  L  +VAIVT +  GI RAIA+HLA L A+++INY + STEA  +A++INSS+
Sbjct: 3  SSVSSLAGRVAIVTGSSRGIGRAIAIHLAELGAKIVINYTTRSTEADQVAAEINSSA 59

[Close]

BLAST of MC05g0973 vs. TAIR 10
Match: AT3G03980.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 7.8e-09
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 4  LPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQIN 55
          LPL  +VAIVT +  GI RAIA+HLA L AR++INY S + +A+ +AS+IN
Sbjct: 12 LPLAGRVAIVTGSSRGIGRAIAIHLAELGARIVINYTSKAADAERVASEIN 62

[Close]

BLAST of MC05g0973 vs. TAIR 10
Match: AT3G04000.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 4.7e-06
Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 1  SAVLPLKDQVAIVTRTYHGISRAIALHLASLDARVLINYLSYSTEAQLLASQINSS 57
          S  L L  +VAIVT +  GI RAIA+HLA L ARV++NY +   EA+ +A+ I ++
Sbjct: 9  SPPLCLAGRVAIVTGSSRGIGRAIAIHLAELGARVVVNYSTSPVEAEKVATAITTN 64

The following BLAST results are available for this feature:

BLAST of MC05g0973 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQR4	1.1e-07	56.86	NADPH-dependent aldehyde reductase-like protein, chloroplastic OS=Arabidopsis th...	[more]
Q9SQR2	6.6e-05	48.21	NADPH-dependent aldehyde reductase 2, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q08632	3.3e-04	49.09	Short-chain type dehydrogenase/reductase OS=Picea abies OX=3329 PE=2 SV=1	[more]

BLAST of MC05g0973 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903366.1	2.03e-15	66.10	PREDICTED: short-chain type dehydrogenase/reductase-like isoform X2 [Cucumis mel...	[more]
KAA0051279.1	2.24e-15	66.10	short-chain type dehydrogenase/reductase-like isoform X1 [Cucumis melo var. maku...	[more]
XP_016903365.1	3.18e-15	66.10	PREDICTED: short-chain type dehydrogenase/reductase-like isoform X1 [Cucumis mel...	[more]
XP_004141140.1	1.57e-14	67.80	NADPH-dependent aldehyde reductase-like protein, chloroplastic [Cucumis sativus]...	[more]
KAF5954055.1	3.50e-11	66.67	hypothetical protein HYC85_006911 [Camellia sinensis]	[more]

BLAST of MC05g0973 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E556	9.84e-16	66.10	short-chain type dehydrogenase/reductase-like isoform X2 OS=Cucumis melo OX=3656...	[more]
A0A5D3E264	1.08e-15	66.10	Short-chain type dehydrogenase/reductase-like isoform X1 OS=Cucumis melo var. ma...	[more]
A0A1S4E5W5	1.54e-15	66.10	short-chain type dehydrogenase/reductase-like isoform X1 OS=Cucumis melo OX=3656...	[more]
A0A0A0LG97	7.58e-15	67.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G843810 PE=4 SV=1	[more]
A0A7J7HNB9	1.69e-11	66.67	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_006911 PE=4 SV=1	[more]

BLAST of MC05g0973 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13180.1	2.0e-09	56.14	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G18210.1	4.6e-09	54.39	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G03980.1	7.8e-09	56.86	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G04000.1	4.7e-06	48.21	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 1..59 e-value: 1.9E-6 score: 29.1
None	No IPR available	PANTHER	PTHR48107	NADPH-DEPENDENT ALDEHYDE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC-RELATED	coord: 2..58
None	No IPR available	PANTHER	PTHR48107:SF4	NADPH-DEPENDENT ALDEHYDE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC	coord: 2..58
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 4..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0973.1	MC05g0973.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019290	siderophore biosynthetic process
molecular_function	GO:0008667	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity