MC05g0917 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g0917
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC05: 8975491 .. 8975574 (+)
RNA-Seq ExpressionMC05g0917
SyntenyMC05g0917
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTATGAGTTTGTCTGCTTCTATAGAAGGATGGAAACACTGCTTACCTGTTATATCCATTAACGACACGTATATAAAAAAC

mRNA sequence

TTTTTTATGAGTTTGTCTGCTTCTATAGAAGGATGGAAACACTGCTTACCTGTTATATCCATTAACGACACGTATATAAAAAAC

Coding sequence (CDS)

TTTTTTATGAGTTTGTCTGCTTCTATAGAAGGATGGAAACACTGCTTACCTGTTATATCCATTAACGACACGTATATAAAAAAC

Protein sequence

FFMSLSASIEGWKHCLPVISINDTYIKN
Homology
BLAST of MC05g0917 vs. NCBI nr
Match: XP_008463665.1 (PREDICTED: uncharacterized protein LOC103501761 [Cucumis melo])

HSP 1 Score: 49.3 bits (116), Expect = 1.76e-05
Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 0

Query: 1   FFMSLSASIEGWKHCLPVISINDTYIKN 28
           FFMSLSASI GW+HC PVISI+ T +KN
Sbjct: 167 FFMSLSASISGWQHCRPVISIDGTSLKN 194

BLAST of MC05g0917 vs. NCBI nr
Match: XP_008465258.1 (PREDICTED: uncharacterized protein LOC103502914 [Cucumis melo])

HSP 1 Score: 49.3 bits (116), Expect = 1.94e-05
Identity = 20/28 (71.43%), Postives = 25/28 (89.29%), Query Frame = 0

Query: 1   FFMSLSASIEGWKHCLPVISINDTYIKN 28
           FFM+LSASI GW+HC PVISI++T +KN
Sbjct: 80  FFMALSASISGWQHCRPVISIDETSLKN 107

BLAST of MC05g0917 vs. NCBI nr
Match: KAA0067108.1 (RNA-dependent RNA polymerase 1 [Cucumis melo var. makuwa] >TYJ97489.1 RNA-dependent RNA polymerase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 49.3 bits (116), Expect = 2.11e-05
Identity = 20/28 (71.43%), Postives = 25/28 (89.29%), Query Frame = 0

Query: 1   FFMSLSASIEGWKHCLPVISINDTYIKN 28
           FFM+LSASI GW+HC PVISI++T +KN
Sbjct: 317 FFMALSASISGWQHCRPVISIDETSLKN 344

BLAST of MC05g0917 vs. NCBI nr
Match: KAA0037417.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 48.1 bits (113), Expect = 3.82e-05
Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0

Query: 1   FFMSLSASIEGWKHCLPVISINDTYIKN 28
           FFM+LSASI GW+HC PVISI+ T +KN
Sbjct: 139 FFMALSASISGWQHCRPVISIDGTSLKN 166

BLAST of MC05g0917 vs. NCBI nr
Match: TYJ97497.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 48.1 bits (113), Expect = 4.25e-05
Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0

Query: 1   FFMSLSASIEGWKHCLPVISINDTYIKN 28
           FFM+LSASI GW+HC PVISI+ T +KN
Sbjct: 155 FFMALSASISGWQHCRPVISIDGTSLKN 182

BLAST of MC05g0917 vs. ExPASy TrEMBL
Match: A0A1S3CJS8 (uncharacterized protein LOC103501761 OS=Cucumis melo OX=3656 GN=LOC103501761 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.54e-06
Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 0

Query: 1   FFMSLSASIEGWKHCLPVISINDTYIKN 28
           FFMSLSASI GW+HC PVISI+ T +KN
Sbjct: 167 FFMSLSASISGWQHCRPVISIDGTSLKN 194

BLAST of MC05g0917 vs. ExPASy TrEMBL
Match: A0A1S3CPY6 (uncharacterized protein LOC103502914 OS=Cucumis melo OX=3656 GN=LOC103502914 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 9.39e-06
Identity = 20/28 (71.43%), Postives = 25/28 (89.29%), Query Frame = 0

Query: 1   FFMSLSASIEGWKHCLPVISINDTYIKN 28
           FFM+LSASI GW+HC PVISI++T +KN
Sbjct: 80  FFMALSASISGWQHCRPVISIDETSLKN 107

BLAST of MC05g0917 vs. ExPASy TrEMBL
Match: A0A5A7VH98 (RNA-dependent RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold598G00530 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.02e-05
Identity = 20/28 (71.43%), Postives = 25/28 (89.29%), Query Frame = 0

Query: 1   FFMSLSASIEGWKHCLPVISINDTYIKN 28
           FFM+LSASI GW+HC PVISI++T +KN
Sbjct: 317 FFMALSASISGWQHCRPVISIDETSLKN 344

BLAST of MC05g0917 vs. ExPASy TrEMBL
Match: A0A5A7T779 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G001290 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.85e-05
Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0

Query: 1   FFMSLSASIEGWKHCLPVISINDTYIKN 28
           FFM+LSASI GW+HC PVISI+ T +KN
Sbjct: 139 FFMALSASISGWQHCRPVISIDGTSLKN 166

BLAST of MC05g0917 vs. ExPASy TrEMBL
Match: A0A5D3BEE6 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00020 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.06e-05
Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0

Query: 1   FFMSLSASIEGWKHCLPVISINDTYIKN 28
           FFM+LSASI GW+HC PVISI+ T +KN
Sbjct: 155 FFMALSASISGWQHCRPVISIDGTSLKN 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_008463665.11.76e-0575.00PREDICTED: uncharacterized protein LOC103501761 [Cucumis melo][more]
XP_008465258.11.94e-0571.43PREDICTED: uncharacterized protein LOC103502914 [Cucumis melo][more]
KAA0067108.12.11e-0571.43RNA-dependent RNA polymerase 1 [Cucumis melo var. makuwa] >TYJ97489.1 RNA-depend... [more]
KAA0037417.13.82e-0571.43protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa][more]
TYJ97497.14.25e-0571.43protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A1S3CJS88.54e-0675.00uncharacterized protein LOC103501761 OS=Cucumis melo OX=3656 GN=LOC103501761 PE=... [more]
A0A1S3CPY69.39e-0671.43uncharacterized protein LOC103502914 OS=Cucumis melo OX=3656 GN=LOC103502914 PE=... [more]
A0A5A7VH981.02e-0571.43RNA-dependent RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A5A7T7791.85e-0571.43Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5D3BEE62.06e-0571.43Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g0917.1MC05g0917.1mRNA