MC05g0879 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0879
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	small G protein signaling modulator 1-like isoform X4
Location	MC05: 7998679 .. 7998855 (+)
RNA-Seq Expression	MC05g0879
Synteny	MC05g0879

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTGTGGTGGGGAAGCTGACGAGCAATGGACTTGTGGAAAAGTCGGCGCTGTCAGTTTGCAGAAAGTAGGTTTGATTGTGCGAGACATTGACGAGCCATGCCTTTCACAATTGCTCATAAAGGTTTTTATAGCTGTAAGACTCTCATCAACTATGAGTATGCATGTGCTTGAG

mRNA sequence

ATGTCTTGTGGTGGGGAAGCTGACGAGCAATGGACTTGTGGAAAAGTCGGCGCTGTCAGTTTGCAGAAAGTAGGTTTGATTGTGCGAGACATTGACGAGCCATGCCTTTCACAATTGCTCATAAAGGTTTTTATAGCTGTAAGACTCTCATCAACTATGAGTATGCATGTGCTTGAG

Coding sequence (CDS)

ATGTCTTGTGGTGGGGAAGCTGACGAGCAATGGACTTGTGGAAAAGTCGGCGCTGTCAGTTTGCAGAAAGTAGGTTTGATTGTGCGAGACATTGACGAGCCATGCCTTTCACAATTGCTCATAAAGGTTTTTATAGCTGTAAGACTCTCATCAACTATGAGTATGCATGTGCTTGAG

Protein sequence

MSCGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAVRLSSTMSMHVLE

Homology

[Close]

BLAST of MC05g0879 vs. NCBI nr
Match: KAA0044525.1 (small G protein signaling modulator 1 isoform X4 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 2.07e-15
Identity = 41/59 (69.49%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 1  MSCGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV-----RLSSTMS 54
          MSCGGEA +QWTC K GA SLQKVGLIVRDI EPCLSQ  IKV I        LSST S
Sbjct: 1  MSCGGEAGKQWTCAKAGAASLQKVGLIVRDIGEPCLSQSPIKVVITAWVVSYNLSSTFS 59

[Close]

BLAST of MC05g0879 vs. NCBI nr
Match: XP_022932690.1 (small G protein signaling modulator 1-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 75.1 bits (183), Expect = 6.79e-14
Identity = 37/47 (78.72%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 1  MSCGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV 47
          MSCGGEAD+QWTC K GA SLQK+GLIVRDI EPCL Q  IKV IAV
Sbjct: 1  MSCGGEADKQWTCAKAGAASLQKMGLIVRDIGEPCLPQSPIKVVIAV 47

[Close]

BLAST of MC05g0879 vs. NCBI nr
Match: XP_023540590.1 (small G protein signaling modulator 1-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 75.1 bits (183), Expect = 6.83e-14
Identity = 37/47 (78.72%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 1  MSCGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV 47
          MSCGGEAD+QWTC K GA SLQK+GLIVRDI EPCL Q  IKV IAV
Sbjct: 1  MSCGGEADKQWTCAKAGAASLQKMGLIVRDIGEPCLPQSPIKVVIAV 47

[Close]

BLAST of MC05g0879 vs. NCBI nr
Match: XP_022932689.1 (small G protein signaling modulator 1-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 75.1 bits (183), Expect = 6.83e-14
Identity = 37/47 (78.72%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 1  MSCGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV 47
          MSCGGEAD+QWTC K GA SLQK+GLIVRDI EPCL Q  IKV IAV
Sbjct: 1  MSCGGEADKQWTCAKAGAASLQKMGLIVRDIGEPCLPQSPIKVVIAV 47

[Close]

BLAST of MC05g0879 vs. NCBI nr
Match: KAG7029130.1 (TBC1 domain family member 15 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 75.1 bits (183), Expect = 6.83e-14
Identity = 37/47 (78.72%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 1  MSCGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV 47
          MSCGGEAD+QWTC K GA SLQK+GLIVRDI EPCL Q  IKV IAV
Sbjct: 1  MSCGGEADKQWTCAKAGAASLQKMGLIVRDIGEPCLPQSPIKVVIAV 47

[Close]

BLAST of MC05g0879 vs. ExPASy TrEMBL
Match: A0A0A0KVX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G010930 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 8.47e-16
Identity = 37/47 (78.72%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 1  MSCGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV 47
          MSCGGEA +QWTC K GA SLQKVGLIVRDI EPCLSQ  IKV I V
Sbjct: 1  MSCGGEAGKQWTCAKAGAASLQKVGLIVRDIGEPCLSQSPIKVVITV 47

[Close]

BLAST of MC05g0879 vs. ExPASy TrEMBL
Match: A0A5A7TT36 (Small G protein signaling modulator 1 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002670 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.00e-15
Identity = 41/59 (69.49%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 1  MSCGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV-----RLSSTMS 54
          MSCGGEA +QWTC K GA SLQKVGLIVRDI EPCLSQ  IKV I        LSST S
Sbjct: 1  MSCGGEAGKQWTCAKAGAASLQKVGLIVRDIGEPCLSQSPIKVVITAWVVSYNLSSTFS 59

[Close]

BLAST of MC05g0879 vs. ExPASy TrEMBL
Match: A0A6J1F2U9 (small G protein signaling modulator 1-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111439159 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.29e-14
Identity = 37/47 (78.72%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 1  MSCGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV 47
          MSCGGEAD+QWTC K GA SLQK+GLIVRDI EPCL Q  IKV IAV
Sbjct: 1  MSCGGEADKQWTCAKAGAASLQKMGLIVRDIGEPCLPQSPIKVVIAV 47

[Close]

BLAST of MC05g0879 vs. ExPASy TrEMBL
Match: A0A6J1EXQ4 (small G protein signaling modulator 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111439159 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.31e-14
Identity = 37/47 (78.72%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 1  MSCGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV 47
          MSCGGEAD+QWTC K GA SLQK+GLIVRDI EPCL Q  IKV IAV
Sbjct: 1  MSCGGEADKQWTCAKAGAASLQKMGLIVRDIGEPCLPQSPIKVVIAV 47

[Close]

BLAST of MC05g0879 vs. ExPASy TrEMBL
Match: A0A6J1F2U5 (small G protein signaling modulator 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439159 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.31e-14
Identity = 37/47 (78.72%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 1  MSCGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV 47
          MSCGGEAD+QWTC K GA SLQK+GLIVRDI EPCL Q  IKV IAV
Sbjct: 1  MSCGGEADKQWTCAKAGAASLQKMGLIVRDIGEPCLPQSPIKVVIAV 47

[Close]

BLAST of MC05g0879 vs. TAIR 10
Match: AT2G43490.1 (Ypt/Rab-GAP domain of gyp1p superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 3.2e-10
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 0


Query: 3  CGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV 48
          C G   +QW+CGK G VSLQKVG +VRD+ EPCLSQ  I+V I +
Sbjct: 2  CSGGEGKQWSCGKAGVVSLQKVGSLVRDLSEPCLSQSRIQVVITI 46

[Close]

BLAST of MC05g0879 vs. TAIR 10
Match: AT2G43490.2 (Ypt/Rab-GAP domain of gyp1p superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 3.2e-10
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 0


Query: 3  CGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV 48
          C G   +QW+CGK G VSLQKVG +VRD+ EPCLSQ  I+V I +
Sbjct: 2  CSGGEGKQWSCGKAGVVSLQKVGSLVRDLSEPCLSQSRIQVVITI 46

[Close]

BLAST of MC05g0879 vs. TAIR 10
Match: AT2G43490.3 (Ypt/Rab-GAP domain of gyp1p superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 3.2e-10
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 0


Query: 3  CGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV 48
          C G   +QW+CGK G VSLQKVG +VRD+ EPCLSQ  I+V I +
Sbjct: 2  CSGGEGKQWSCGKAGVVSLQKVGSLVRDLSEPCLSQSRIQVVITI 46

[Close]

BLAST of MC05g0879 vs. TAIR 10
Match: AT2G43490.4 (Ypt/Rab-GAP domain of gyp1p superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 3.2e-10
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 0


Query: 3  CGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV 48
          C G   +QW+CGK G VSLQKVG +VRD+ EPCLSQ  I+V I +
Sbjct: 2  CSGGEGKQWSCGKAGVVSLQKVGSLVRDLSEPCLSQSRIQVVITI 46

[Close]

BLAST of MC05g0879 vs. TAIR 10
Match: AT2G43490.5 (Ypt/Rab-GAP domain of gyp1p superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 3.2e-10
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 0


Query: 3  CGGEADEQWTCGKVGAVSLQKVGLIVRDIDEPCLSQLLIKVFIAV 48
          C G   +QW+CGK G VSLQKVG +VRD+ EPCLSQ  I+V I +
Sbjct: 2  CSGGEGKQWSCGKAGVVSLQKVGSLVRDLSEPCLSQSRIQVVITI 46

The following BLAST results are available for this feature:

BLAST of MC05g0879 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g0879 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044525.1	2.07e-15	69.49	small G protein signaling modulator 1 isoform X4 [Cucumis melo var. makuwa]	[more]
XP_022932690.1	6.79e-14	78.72	small G protein signaling modulator 1-like isoform X4 [Cucurbita moschata]	[more]
XP_023540590.1	6.83e-14	78.72	small G protein signaling modulator 1-like isoform X3 [Cucurbita pepo subsp. pep...	[more]
XP_022932689.1	6.83e-14	78.72	small G protein signaling modulator 1-like isoform X3 [Cucurbita moschata]	[more]
KAG7029130.1	6.83e-14	78.72	TBC1 domain family member 15 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of MC05g0879 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVX5	8.47e-16	78.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G010930 PE=4 SV=1	[more]
A0A5A7TT36	1.00e-15	69.49	Small G protein signaling modulator 1 isoform X4 OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1F2U9	3.29e-14	78.72	small G protein signaling modulator 1-like isoform X4 OS=Cucurbita moschata OX=3...	[more]
A0A6J1EXQ4	3.31e-14	78.72	small G protein signaling modulator 1-like isoform X3 OS=Cucurbita moschata OX=3...	[more]
A0A6J1F2U5	3.31e-14	78.72	small G protein signaling modulator 1-like isoform X1 OS=Cucurbita moschata OX=3...	[more]

BLAST of MC05g0879 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43490.1	3.2e-10	60.00	Ypt/Rab-GAP domain of gyp1p superfamily protein	[more]
AT2G43490.2	3.2e-10	60.00	Ypt/Rab-GAP domain of gyp1p superfamily protein	[more]
AT2G43490.3	3.2e-10	60.00	Ypt/Rab-GAP domain of gyp1p superfamily protein	[more]
AT2G43490.4	3.2e-10	60.00	Ypt/Rab-GAP domain of gyp1p superfamily protein	[more]
AT2G43490.5	3.2e-10	60.00	Ypt/Rab-GAP domain of gyp1p superfamily protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0879.1	MC05g0879.1	mRNA