MC05g0851 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0851
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	transcription factor DIVARICATA-like
Location	MC05: 7474151 .. 7474456 (+)
RNA-Seq Expression	MC05g0851
Synteny	MC05g0851

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAATTTGCCGGAGAGACCTGGCGCTGAAGAAGCTGGCAGTGGCAATTTACCTGTCAGGCGTTGGACCAAGGACGAACACATGTAAGTATTCTCGCTCTCTCTTTTTTCCAAACGATATATAAGAATCTCTAAAGTTAAAGTTTTTCCTTTTTCGTTTGATTTGGATTATTGCAGGCTATTTTTGATGGGACTGGAGAAGTACGGAAATGGAAATTGGAAAGAAATTGCAACAGAATTTGTGGTCACAAGAACATCCACCCAGGTGGCCAGCCATGCCCAGAAGTACTGCAAGTACCGCCAAAAC

mRNA sequence

GTGAATTTGCCGGAGAGACCTGGCGCTGAAGAAGCTGGCAGTGGCAATTTACCTGTCAGGCGTTGGACCAAGGACGAACACATGCTATTTTTGATGGGACTGGAGAAGTACGGAAATGGAAATTGGAAAGAAATTGCAACAGAATTTGTGGTCACAAGAACATCCACCCAGGTGGCCAGCCATGCCCAGAAGTACTGCAAGTACCGCCAAAAC

Coding sequence (CDS)

GTGAATTTGCCGGAGAGACCTGGCGCTGAAGAAGCTGGCAGTGGCAATTTACCTGTCAGGCGTTGGACCAAGGACGAACACATGCTATTTTTGATGGGACTGGAGAAGTACGGAAATGGAAATTGGAAAGAAATTGCAACAGAATTTGTGGTCACAAGAACATCCACCCAGGTGGCCAGCCATGCCCAGAAGTACTGCAAGTACCGCCAAAAC

Protein sequence

VNLPERPGAEEAGSGNLPVRRWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQN

Homology

[Close]

BLAST of MC05g0851 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.6e-13
Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 6   RPGAEEAGSGNLPVRRWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKY 65
           RP  +E   G +P   WT++EH LFLMGL+KYG G+W+ I+  FV+TRT TQVASHAQKY
Sbjct: 122 RPSEQERKKG-VP---WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 177

[Close]

BLAST of MC05g0851 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.1e-13
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 22  WTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKY 66
           WT+DEH LFL+GL+KYG G+W+ I+  FVVTRT TQVASHAQKY
Sbjct: 120 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 163

[Close]

BLAST of MC05g0851 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.7e-12
Identity = 28/44 (63.64%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 22  WTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKY 66
           WT++EH LFL+GL+K+G G+W+ I+  FV++RT TQVASHAQKY
Sbjct: 144 WTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 187

[Close]

BLAST of MC05g0851 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.7e-12
Identity = 28/44 (63.64%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 22  WTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKY 66
           WT++EH LFL+GL+K+G G+W+ I+  FV++RT TQVASHAQKY
Sbjct: 144 WTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 187

[Close]

BLAST of MC05g0851 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-11
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0


Query: 22  WTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQN 72
           WT++EH LFL+GL+K G G+W+ I+  FV TRT TQVASHAQKY   R N
Sbjct: 97  WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSN 146

[Close]

BLAST of MC05g0851 vs. NCBI nr
Match: XP_022145130.1 (transcription factor DIVARICATA-like [Momordica charantia])

HSP 1 Score: 154 bits (388), Expect = 3.33e-45
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1   VNLPERPGAEEAGSGNLPVRRWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVAS 60
           VNLPERPGAEEAGSGNLPVRRWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVAS
Sbjct: 84  VNLPERPGAEEAGSGNLPVRRWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVAS 143

Query: 61  HAQKYCKYRQN 71
           HAQKYCKYRQN
Sbjct: 144 HAQKYCKYRQN 154

[Close]

BLAST of MC05g0851 vs. NCBI nr
Match: XP_022145147.1 (uncharacterized protein LOC111014661 [Momordica charantia])

HSP 1 Score: 130 bits (328), Expect = 1.88e-35
Identity = 59/71 (83.10%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 1   VNLPERPGAEEAGSGNLPVRRWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVAS 60
           VNLP+RPGAEEAGSGNLPVRRWTKDEHMLFL+G EKYG GNWKEI+T+  VT+TSTQV S
Sbjct: 150 VNLPDRPGAEEAGSGNLPVRRWTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTS 209

Query: 61  HAQKYCKYRQN 71
           HAQKY KY QN
Sbjct: 210 HAQKYHKYNQN 220

[Close]

BLAST of MC05g0851 vs. NCBI nr
Match: XP_011627517.1 (transcription factor DIVARICATA [Amborella trichopoda])

HSP 1 Score: 82.8 bits (203), Expect = 3.40e-17
Identity = 39/63 (61.90%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 7   PGAEEAGSGNLPVRR----WTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHA 65
           PG    G G  P R+    WT+DEH LFLMGLEKYG G+W+ I+  FVVTRT TQVASHA
Sbjct: 100 PGGGRGGRGGDPERKKGVPWTEDEHRLFLMGLEKYGKGDWRSISRNFVVTRTPTQVASHA 159

[Close]

BLAST of MC05g0851 vs. NCBI nr
Match: CDY40741.1 (BnaAnng06040D [Brassica napus])

HSP 1 Score: 81.3 bits (199), Expect = 1.50e-16
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 11  EAGSGNLPVRRWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKY 65
           + GSGN     WT+DEH LFL+GL+KYG G+W+ I+  FVVTRT TQVASHAQKY
Sbjct: 78  QGGSGNSHGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 132

[Close]

BLAST of MC05g0851 vs. NCBI nr
Match: PSS09469.1 (Transcription factor DIVARICATA like [Actinidia chinensis var. chinensis])

HSP 1 Score: 79.0 bits (193), Expect = 1.57e-15
Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 7   PGAEEAGSG-NLPVRR-----WTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVAS 65
           PG + + SG N    R     WT++EH LFLMGL+KYG G+WK I+  FV+TRTSTQVAS
Sbjct: 100 PGRKRSSSGRNSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWKNISRNFVITRTSTQVAS 159

[Close]

BLAST of MC05g0851 vs. ExPASy TrEMBL
Match: A0A6J1CTL3 (transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111014647 PE=4 SV=1)

HSP 1 Score: 154 bits (388), Expect = 1.61e-45
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1   VNLPERPGAEEAGSGNLPVRRWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVAS 60
           VNLPERPGAEEAGSGNLPVRRWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVAS
Sbjct: 84  VNLPERPGAEEAGSGNLPVRRWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVAS 143

Query: 61  HAQKYCKYRQN 71
           HAQKYCKYRQN
Sbjct: 144 HAQKYCKYRQN 154

[Close]

BLAST of MC05g0851 vs. ExPASy TrEMBL
Match: A0A6J1CVN6 (uncharacterized protein LOC111014661 OS=Momordica charantia OX=3673 GN=LOC111014661 PE=4 SV=1)

HSP 1 Score: 130 bits (328), Expect = 9.10e-36
Identity = 59/71 (83.10%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 1   VNLPERPGAEEAGSGNLPVRRWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVAS 60
           VNLP+RPGAEEAGSGNLPVRRWTKDEHMLFL+G EKYG GNWKEI+T+  VT+TSTQV S
Sbjct: 150 VNLPDRPGAEEAGSGNLPVRRWTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTS 209

Query: 61  HAQKYCKYRQN 71
           HAQKY KY QN
Sbjct: 210 HAQKYHKYNQN 220

[Close]

BLAST of MC05g0851 vs. ExPASy TrEMBL
Match: A0A078HSM6 (BnaAnng06040D protein OS=Brassica napus OX=3708 GN=BnaAnng06040D PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.24e-17
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 11  EAGSGNLPVRRWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKY 65
           + GSGN     WT+DEH LFL+GL+KYG G+W+ I+  FVVTRT TQVASHAQKY
Sbjct: 78  QGGSGNSHGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 132

[Close]

BLAST of MC05g0851 vs. ExPASy TrEMBL
Match: A0A2R6QJ91 (Transcription factor DIVARICATA like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16492 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.59e-16
Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 7   PGAEEAGSG-NLPVRR-----WTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVAS 65
           PG + + SG N    R     WT++EH LFLMGL+KYG G+WK I+  FV+TRTSTQVAS
Sbjct: 100 PGRKRSSSGRNSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWKNISRNFVITRTSTQVAS 159

[Close]

BLAST of MC05g0851 vs. ExPASy TrEMBL
Match: W8PFD7 (DIVARICATA (Fragment) OS=Plantago major OX=29818 GN=DIV PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.85e-16
Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 4   PERPGAEEAGSGNLPVRRWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQ 63
           P RP  +E   G +P   WT++EH LFL+GL+KYG G+W+ I+  +V+TRT TQVASHAQ
Sbjct: 62  PGRPNEQERKKG-VP---WTEEEHKLFLLGLKKYGKGDWRNISRNYVITRTPTQVASHAQ 119

Query: 64  KY 65
           KY
Sbjct: 122 KY 119

[Close]

BLAST of MC05g0851 vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 1.5e-14
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 22  WTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKY 66
           WT+DEH LFL+GL+KYG G+W+ I+  FVVTRT TQVASHAQKY
Sbjct: 120 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 163

[Close]

BLAST of MC05g0851 vs. TAIR 10
Match: AT5G01200.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 2.5e-14
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 22  WTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKY 66
           WT+DEH+ FLMGL+KYG G+W+ IA  FV TRT TQVASHAQKY
Sbjct: 148 WTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKY 191

[Close]

BLAST of MC05g0851 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 74.7 bits (182), Expect = 3.3e-14
Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 22  WTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKY 66
           WT++EH LFLMGL+KYG G+W+ I+  FV+TRT TQVASHAQKY
Sbjct: 143 WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 186

[Close]

BLAST of MC05g0851 vs. TAIR 10
Match: AT2G38090.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 1.6e-13
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0


Query: 22  WTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKY 66
           WT++EH  FLMGL+KYG G+W+ IA  FV TRT TQVASHAQKY
Sbjct: 143 WTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKY 186

[Close]

BLAST of MC05g0851 vs. TAIR 10
Match: AT1G49010.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 2.2e-13
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 8   GAEEAGSGNLPVRR----WTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQ 66
           G    GS     RR    WT++EH LFL+GL+K+G G+W+ I+  FV++RT TQVASHAQ
Sbjct: 118 GGRSGGSRAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQ 177

The following BLAST results are available for this feature:

BLAST of MC05g0851 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9H7	1.6e-13	60.00	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
Q9FNN6	2.1e-13	72.73	Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1	[more]
B8A9B2	6.7e-12	63.64	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
Q8LH59	6.7e-12	63.64	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]
Q2V9B0	1.5e-11	62.00	Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]

BLAST of MC05g0851 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145130.1	3.33e-45	100.00	transcription factor DIVARICATA-like [Momordica charantia]	[more]
XP_022145147.1	1.88e-35	83.10	uncharacterized protein LOC111014661 [Momordica charantia]	[more]
XP_011627517.1	3.40e-17	61.90	transcription factor DIVARICATA [Amborella trichopoda]	[more]
CDY40741.1	1.50e-16	65.45	BnaAnng06040D [Brassica napus]	[more]
PSS09469.1	1.57e-15	60.00	Transcription factor DIVARICATA like [Actinidia chinensis var. chinensis]	[more]

BLAST of MC05g0851 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTL3	1.61e-45	100.00	transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1CVN6	9.10e-36	83.10	uncharacterized protein LOC111014661 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A078HSM6	7.24e-17	65.45	BnaAnng06040D protein OS=Brassica napus OX=3708 GN=BnaAnng06040D PE=4 SV=1	[more]
A0A2R6QJ91	7.59e-16	60.00	Transcription factor DIVARICATA like OS=Actinidia chinensis var. chinensis OX=15...	[more]
W8PFD7	8.85e-16	56.45	DIVARICATA (Fragment) OS=Plantago major OX=29818 GN=DIV PE=4 SV=1	[more]

BLAST of MC05g0851 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08520.1	1.5e-14	72.73	Duplicated homeodomain-like superfamily protein	[more]
AT5G01200.1	2.5e-14	72.73	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	3.3e-14	70.45	Homeodomain-like transcriptional regulator	[more]
AT2G38090.1	1.6e-13	70.45	Duplicated homeodomain-like superfamily protein	[more]
AT1G49010.1	2.2e-13	53.23	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 18..68 e-value: 9.2E-10 score: 48.4
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 21..66 score: 6.93401
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 21..65 e-value: 5.9058E-11 score: 49.8814
None	No IPR available	GENE3D	1.10.10.60		coord: 20..70 e-value: 2.8E-16 score: 61.4
None	No IPR available	PANTHER	PTHR44191	TRANSCRIPTION FACTOR KUA1	coord: 19..67
None	No IPR available	PANTHER	PTHR44191:SF21	TRANSCRIPTION FACTOR SRM1	coord: 19..67
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 21..65 e-value: 1.1E-12 score: 47.9
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 20..70 score: 14.873614
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 20..65 e-value: 1.5E-15 score: 55.2
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 17..71 score: 10.626292
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 19..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0851.1	MC05g0851.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009739	response to gibberellin
biological_process	GO:0009751	response to salicylic acid
molecular_function	GO:0003677	DNA binding