MC05g0840 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0840
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	hapless 8
Location	MC05: 7295842 .. 7296039 (+)
RNA-Seq Expression	MC05g0840
Synteny	MC05g0840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATTTGTTTGCAGACAGTACACTCTTTCTTGTCGTCAGAAGAACTTATTTCATTGTTGGCCATTTCCAGTCAAGTATCTGCTTCTATGTCTGAGCCATGGTGTCAACAATATTTTGCCACCACTTGATCTCCCTCCCTATGTCATTCAATCATCCGAACATGTCCGCTCGATCGATTGTATGCAGAAAGACAACAAA

mRNA sequence

TCATTTGTTTGCAGACAGTACACTCTTTCTTGTCGTCAGAAGAACTTATTTCATTGTTGGCCATTTCCAGTCAAGTATCTGCTTCTATGTCTGAGCCATGGTGTCAACAATATTTTGCCACCACTTGATCTCCCTCCCTATGTCATTCAATCATCCGAACATGTCCGCTCGATCGATTGTATGCAGAAAGACAACAAA

Coding sequence (CDS)

TCATTTGTTTGCAGACAGTACACTCTTTCTTGTCGTCAGAAGAACTTATTTCATTGTTGGCCATTTCCAGTCAAGTATCTGCTTCTATGTCTGAGCCATGGTGTCAACAATATTTTGCCACCACTTGATCTCCCTCCCTATGTCATTCAATCATCCGAACATGTCCGCTCGATCGATTGTATGCAGAAAGACAACAAA

Protein sequence

SFVCRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDCMQKDNK

Homology

[Close]

BLAST of MC05g0840 vs. NCBI nr
Match: XP_022145235.1 (uncharacterized protein LOC111014738 [Momordica charantia] >XP_022145236.1 uncharacterized protein LOC111014738 [Momordica charantia] >XP_022145237.1 uncharacterized protein LOC111014738 [Momordica charantia])

HSP 1 Score: 141 bits (356), Expect = 1.78e-40
Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 2  FVCRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDCM 61
          F  RQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDCM
Sbjct: 16 FSIRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDCM 75

Query: 62 QKDNK 66
          QKDNK
Sbjct: 76 QKDNK 80

[Close]

BLAST of MC05g0840 vs. NCBI nr
Match: XP_022972113.1 (uncharacterized protein LOC111470745 [Cucurbita maxima])

HSP 1 Score: 93.2 bits (230), Expect = 2.99e-21
Identity = 44/65 (67.69%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 2  FVCRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDCM 61
          F  RQYTLSCRQKN+F CWPFP KYLLLC  HGV N+LPP+  P  VIQSSE   SID  
Sbjct: 17 FSIRQYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSID-F 76

Query: 62 QKDNK 66
          + DNK
Sbjct: 77 KADNK 80

[Close]

BLAST of MC05g0840 vs. NCBI nr
Match: XP_022932720.1 (uncharacterized protein LOC111439185 [Cucurbita moschata])

HSP 1 Score: 93.2 bits (230), Expect = 2.99e-21
Identity = 44/65 (67.69%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 2  FVCRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDCM 61
          F  RQYTLSCRQKN+F CWPFP KYLLLC  HGV N+LPP+  P  VIQSSE   SID  
Sbjct: 17 FSIRQYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSID-F 76

Query: 62 QKDNK 66
          + DNK
Sbjct: 77 KADNK 80

[Close]

BLAST of MC05g0840 vs. NCBI nr
Match: KAG7029091.1 (hypothetical protein SDJN02_10275 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 92.8 bits (229), Expect = 5.62e-21
Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 0


Query: 2  FVCRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDCM 61
          F  RQYTLSCRQKN+F CWPFP KYL+LC  HGV+N+LPP+  P  VIQSSE   SID  
Sbjct: 17 FSIRQYTLSCRQKNIFDCWPFPDKYLILCQKHGVSNVLPPIHPPRSVIQSSEDDHSID-F 76

Query: 62 QKDNK 66
          + DNK
Sbjct: 77 KADNK 80

[Close]

BLAST of MC05g0840 vs. NCBI nr
Match: XP_023539065.1 (uncharacterized protein LOC111799818 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 91.3 bits (225), Expect = 1.65e-20
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 2  FVCRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDCM 61
          F  RQYTLSCRQKN+F CWPFP KYLLLC  HGV ++LPP+  P  VIQSSE   SID  
Sbjct: 17 FSIRQYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTDVLPPIHPPRSVIQSSEDDHSID-F 76

Query: 62 QKDNK 66
          + DNK
Sbjct: 77 KPDNK 80

[Close]

BLAST of MC05g0840 vs. ExPASy TrEMBL
Match: A0A6J1CW12 (uncharacterized protein LOC111014738 OS=Momordica charantia OX=3673 GN=LOC111014738 PE=4 SV=1)

HSP 1 Score: 141 bits (356), Expect = 8.64e-41
Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 2  FVCRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDCM 61
          F  RQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDCM
Sbjct: 16 FSIRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDCM 75

Query: 62 QKDNK 66
          QKDNK
Sbjct: 76 QKDNK 80

[Close]

BLAST of MC05g0840 vs. ExPASy TrEMBL
Match: A0A6J1I8Y1 (uncharacterized protein LOC111470745 OS=Cucurbita maxima OX=3661 GN=LOC111470745 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.45e-21
Identity = 44/65 (67.69%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 2  FVCRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDCM 61
          F  RQYTLSCRQKN+F CWPFP KYLLLC  HGV N+LPP+  P  VIQSSE   SID  
Sbjct: 17 FSIRQYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSID-F 76

Query: 62 QKDNK 66
          + DNK
Sbjct: 77 KADNK 80

[Close]

BLAST of MC05g0840 vs. ExPASy TrEMBL
Match: A0A6J1F2X5 (uncharacterized protein LOC111439185 OS=Cucurbita moschata OX=3662 GN=LOC111439185 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.45e-21
Identity = 44/65 (67.69%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 2  FVCRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDCM 61
          F  RQYTLSCRQKN+F CWPFP KYLLLC  HGV N+LPP+  P  VIQSSE   SID  
Sbjct: 17 FSIRQYTLSCRQKNIFDCWPFPDKYLLLCQKHGVTNVLPPIHPPRSVIQSSEDDHSID-F 76

Query: 62 QKDNK 66
          + DNK
Sbjct: 77 KADNK 80

[Close]

BLAST of MC05g0840 vs. ExPASy TrEMBL
Match: A0A6J5TXQ4 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS12268 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.30e-14
Identity = 29/65 (44.62%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 2  FVCRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDCM 61
          F  RQY L+CRQK++   WPFP KYL +CL++G++++LPPL+     IQS      ++C 
Sbjct: 33 FSIRQYVLACRQKDVLSNWPFPEKYLQICLNYGISDVLPPLESHNSAIQSLRGAVGLNCT 92

Query: 62 QKDNK 66
          Q+D++
Sbjct: 93 QQDDE 97

[Close]

BLAST of MC05g0840 vs. ExPASy TrEMBL
Match: W9RWA5 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021765 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.19e-14
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 1  SFVCRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDC 60
          SF  RQY L+ RQK+ FH WPFP KYL +CLSHG+N+ LPP +     I+S   +R ++C
Sbjct: 22 SFSIRQYVLAYRQKDFFHNWPFPEKYLQMCLSHGINDALPPFEPHHIAIESIRGLRRLNC 81

Query: 61 MQKDNK 66
           ++  +
Sbjct: 82 SRQSKQ 87

[Close]

BLAST of MC05g0840 vs. TAIR 10
Match: AT5G56250.2 (hapless 8 )

HSP 1 Score: 50.4 bits (119), Expect = 6.2e-07
Identity = 24/66 (36.36%), Postives = 34/66 (51.52%), Query Frame = 0


Query: 1   SFVCRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDC 60
           +F  R Y  S R KN+   WPF    L LCL+HG+ + LPP+  P     +  HV ++  
Sbjct: 39  TFSIRDYAFSYRTKNIKKSWPFSSTSLQLCLNHGLTDPLPPIQPPEVKKPNITHVEAVSH 98

Query: 61  MQKDNK 67
            +K  K
Sbjct: 99  KRKSEK 104

[Close]

BLAST of MC05g0840 vs. TAIR 10
Match: AT5G56250.1 (hapless 8 )

HSP 1 Score: 50.4 bits (119), Expect = 6.2e-07
Identity = 24/66 (36.36%), Postives = 34/66 (51.52%), Query Frame = 0


Query: 1   SFVCRQYTLSCRQKNLFHCWPFPVKYLLLCLSHGVNNILPPLDLPPYVIQSSEHVRSIDC 60
           +F  R Y  S R KN+   WPF    L LCL+HG+ + LPP+  P     +  HV ++  
Sbjct: 39  TFSIRDYAFSYRTKNIKKSWPFSSTSLQLCLNHGLTDPLPPIQPPEVKKPNITHVEAVSH 98

Query: 61  MQKDNK 67
            +K  K
Sbjct: 99  KRKSEK 104

The following BLAST results are available for this feature:

BLAST of MC05g0840 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g0840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145235.1	1.78e-40	96.92	uncharacterized protein LOC111014738 [Momordica charantia] >XP_022145236.1 uncha...	[more]
XP_022972113.1	2.99e-21	67.69	uncharacterized protein LOC111470745 [Cucurbita maxima]	[more]
XP_022932720.1	2.99e-21	67.69	uncharacterized protein LOC111439185 [Cucurbita moschata]	[more]
KAG7029091.1	5.62e-21	66.15	hypothetical protein SDJN02_10275 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023539065.1	1.65e-20	66.15	uncharacterized protein LOC111799818 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC05g0840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CW12	8.64e-41	96.92	uncharacterized protein LOC111014738 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1I8Y1	1.45e-21	67.69	uncharacterized protein LOC111470745 OS=Cucurbita maxima OX=3661 GN=LOC111470745...	[more]
A0A6J1F2X5	1.45e-21	67.69	uncharacterized protein LOC111439185 OS=Cucurbita moschata OX=3662 GN=LOC1114391...	[more]
A0A6J5TXQ4	2.30e-14	44.62	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS12268 PE=4 S...	[more]
W9RWA5	3.19e-14	46.97	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021765 PE=4 SV=1	[more]

BLAST of MC05g0840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56250.2	6.2e-07	36.36	hapless 8	[more]
AT5G56250.1	6.2e-07	36.36	hapless 8	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35767:SF8	SUBFAMILY NOT NAMED	coord: 1..65
None	No IPR available	PANTHER	PTHR35767	HAPLESS PROTEIN	coord: 1..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0840.1	MC05g0840.1	mRNA