MC05g0823 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0823
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	nuclear transport factor 2
Location	MC05: 7119887 .. 7122066 (-)
RNA-Seq Expression	MC05g0823
Synteny	MC05g0823

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGACTGGCAATTGGCGTTAGAGTTACGCGAATTAAATTTAAAAAACACAAAAATAAATAAATAAATCCCGAAATCGGACGATTCTAACCCTCAAAATTCGTCGATACTATAAATTCTCGATTAACCCTCAAAGTTTCTGGAACCCTCGGCCAACGCTGTCGTCTCCATTTTTTCTCTGTAAAACTCAGCGTTGTTCTCAAGCAGGGCGGAGGAGAGCGAGTCTCTGTTATCTCTTTCCCGGCGGCGGATTCGAAGATTGCGGTAATGGATCCCGACGCGGTGGCGAAGGCATTCGTTGAACATTATTACTCCACCTTCGACGCCAATCGAACCGGTCTTGCGAATCTCTACCAGGACAATTCCATGTTGACGTTTGAAGGTCAGAAGATCCAAGGCGCGCAGAATATCGTAGCCAAGCTCACTGGCCTCCCCTTCCAGCAGTGCCAGCACTCCGTTACCACCGTCGATTGCCAGCCTTCCGGCCCCAACGGCGGCGTGCTCGTCTTCGTCAGCGGCAATCTTCAGCTTGCCGGAGAGCAACATGCGCTCAAATTCAGTCAGGTAATCGGTTTGTTGCTATCGATTTGATGCCCTGTTTTAGCGATGTTGAATATGTAGGTTGATTTTGGTTGGATCTGTTGTTTTCTTGGAGCTCGCCGATCCTAGTTAGAGGGTTTGACTGCTTTACTGAATTTGTTGTTGTGATTATCTCTAATTTTGCGTTTGTGCGCTTGAAATATCATTAGATTTTTGGTCATCTGCGTCGTCTTTGTTCATGTAGATCTAGGGCTTTTCGTCTGAACTCTTTTTGCTATATTTGGATAGCGTAACTGTAGATCAAGCTTGAGATTGTTCTTCTTAATATATTTGGTGTTTTGCAACTGCAGCATGTCTGAGATGATTTATGTTTTACCATTGGGTTATTATTTTTTTAGATGAAGTACTACGGGTTGAACAAGTTCATTTGGCTATCTATCTGATTTACCAACATGGGCCTAGTTAGGAACTTGAAGCTGCCTGATTTTCAAACTCTAATAAGTTAGTTCTAATTTGTTTTAACTTGGAAGTTGCTGTTATTGTTTGTGGGAGTTTGTGAGGTGACTAAGAAAGTTCATCCTGCTGTTATGTTTGAACGACAACGTTGCCACTGGGTTCGTCCCATGTGGCGGCTTTCTTCCTATGTGCATGTTGTAACTTCCTTGGCTTATTATGATGATATCTTTGAAGCTATGATACGTTTAATCGAATTTGGTCTTCTTAGATATATTTTTTTATGGGACTGCAAGAGCAATGTATTTGTATGTTCTTCAATAGTTTTTGTAATTCAACCTATTTGCAAAATTTATATGGAATTGAATTTATTTTAGAACAATGAACATATTGTTAAAACAAATTATGGAATGATATTATATTTTATATTCTCTGATGGGTTTTTCTCTTTGTGTTTATTATTATGAAACAACTTCGATACTGTTATGAGATTCTTGGAGAAATTGAGAATTTGTTAATATCTCTGAAAGATGAAGAAAGAAAGCATAGTTTTAAATAGTTAATTACAGGATGAACTAATGGCTAAATTTGAACATTTAACTGCTTTGTGGACAGTTTTCTTTCTTGTTAACTGTGAATTTATGTTTTGTAGAATTTTGACTTGTTTACTGATTGTATTTAAGTAGGTTGGGTCCCATACAATGCACATACAAAATTTTTCTAACCAAACTGTATTCGCTATGTGCTTTCAGATGTTCCATTTGATGCCAACCCCACAGGGAAGCTTCTTTGTGCTGAATGACATTTTCCGATTGAACTATGCTTGAAGTGAAGATTAATGGGTGGCCTGAAATGTCACGATATTCAGCCAGTTTGTTTATCACCGTTGGGATTTTTTAGACATTTGAAATGGGAACTCGGATTATATTTTATTGTGTTTATGCTTCAATGTGTGCCTATAAAAAGTCGAATTTCTTGGTTGTCATTGAGAATTGATGAAATAGATGGTTTCATTCAGGTGATTTGCTCAATACTCCCTGCATACTATTCAGACACAAGTATATTATATGCCGCACCATTATACGAGCAGAAAATCACCGCTCAATATTGGTTTATGACATAATGTTAATAAAACTTCTTCGGCATGGACATCGAAATACGCAATGTTCAAAATGGAATCAAAATCAGA

mRNA sequence

GCGACTGGCAATTGGCGTTAGAGTTACGCGAATTAAATTTAAAAAACACAAAAATAAATAAATAAATCCCGAAATCGGACGATTCTAACCCTCAAAATTCGTCGATACTATAAATTCTCGATTAACCCTCAAAGTTTCTGGAACCCTCGGCCAACGCTGTCGTCTCCATTTTTTCTCTGTAAAACTCAGCGTTGTTCTCAAGCAGGGCGGAGGAGAGCGAGTCTCTGTTATCTCTTTCCCGGCGGCGGATTCGAAGATTGCGGTAATGGATCCCGACGCGGTGGCGAAGGCATTCGTTGAACATTATTACTCCACCTTCGACGCCAATCGAACCGGTCTTGCGAATCTCTACCAGGACAATTCCATGTTGACGTTTGAAGGTCAGAAGATCCAAGGCGCGCAGAATATCGTAGCCAAGCTCACTGGCCTCCCCTTCCAGCAGTGCCAGCACTCCGTTACCACCGTCGATTGCCAGCCTTCCGGCCCCAACGGCGGCGTGCTCGTCTTCGTCAGCGGCAATCTTCAGCTTGCCGGAGAGCAACATGCGCTCAAATTCAGTCAGATGTTCCATTTGATGCCAACCCCACAGGGAAGCTTCTTTGTGCTGAATGACATTTTCCGATTGAACTATGCTTGAAGTGAAGATTAATGGGTGGCCTGAAATGTCACGATATTCAGCCAGTTTGTTTATCACCGTTGGGATTTTTTAGACATTTGAAATGGGAACTCGGATTATATTTTATTGTGTTTATGCTTCAATGTGTGCCTATAAAAAGTCGAATTTCTTGGTTGTCATTGAGAATTGATGAAATAGATGGTTTCATTCAGGTGATTTGCTCAATACTCCCTGCATACTATTCAGACACAAGTATATTATATGCCGCACCATTATACGAGCAGAAAATCACCGCTCAATATTGGTTTATGACATAATGTTAATAAAACTTCTTCGGCATGGACATCGAAATACGCAATGTTCAAAATGGAATCAAAATCAGA

Coding sequence (CDS)

ATGGATCCCGACGCGGTGGCGAAGGCATTCGTTGAACATTATTACTCCACCTTCGACGCCAATCGAACCGGTCTTGCGAATCTCTACCAGGACAATTCCATGTTGACGTTTGAAGGTCAGAAGATCCAAGGCGCGCAGAATATCGTAGCCAAGCTCACTGGCCTCCCCTTCCAGCAGTGCCAGCACTCCGTTACCACCGTCGATTGCCAGCCTTCCGGCCCCAACGGCGGCGTGCTCGTCTTCGTCAGCGGCAATCTTCAGCTTGCCGGAGAGCAACATGCGCTCAAATTCAGTCAGATGTTCCATTTGATGCCAACCCCACAGGGAAGCTTCTTTGTGCTGAATGACATTTTCCGATTGAACTATGCTTGA

Protein sequence

MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRLNYA

Homology

[Close]

BLAST of MC05g0823 vs. ExPASy Swiss-Prot
Match: Q9C7F5 (Nuclear transport factor 2B OS=Arabidopsis thaliana OX=3702 GN=NTF2B PE=1 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.1e-57
Identity = 104/123 (84.55%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAV+KAFVEHYYSTFD NR GLA LYQ+ SMLTFEGQKIQG Q+IVAKLT LPFQQC
Sbjct: 4   MDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAKLTSLPFQQC 63

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           +H ++TVDCQPSGP  G+LVFVSGNLQLAGE+HALKFSQMFHLMPTPQGSF+V NDIFRL
Sbjct: 64  KHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIFRL 123

Query: 121 NYA 124
           NYA
Sbjct: 124 NYA 126

[Close]

BLAST of MC05g0823 vs. ExPASy Swiss-Prot
Match: Q9FZK4 (Nuclear transport factor 2A OS=Arabidopsis thaliana OX=3702 GN=NTF2A PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 4.5e-56
Identity = 104/123 (84.55%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAVAKAFVEHYYSTFDANR GL +LYQ+ SMLTFEGQKIQG+QNIVAKLTGLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRPGLVSLYQEGSMLTFEGQKIQGSQNIVAKLTGLPFQQC 60

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           +H++TTVDCQPSGP GG+LVFVSGNLQLAGEQHALKFSQMFHL+ + QG+++V NDIFRL
Sbjct: 61  KHNITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLI-SNQGNYYVFNDIFRL 120

Query: 121 NYA 124
           NYA
Sbjct: 121 NYA 122

[Close]

BLAST of MC05g0823 vs. ExPASy Swiss-Prot
Match: Q9XJ54 (Nuclear transport factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=NTF2 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.4e-41
Identity = 81/122 (66.39%), Postives = 93/122 (76.23%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MD DAVAKAFVEHYY TFD NR  L +LYQD SMLTFEGQ+  GA  I  KL  LPF QC
Sbjct: 1   MDADAVAKAFVEHYYRTFDTNRPALVSLYQDGSMLTFEGQQFLGAAAIAGKLGSLPFAQC 60

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
            H + TVDCQPSGP GG+LVFVSG+L+   ++H LKFSQMF L+P   G+F+V ND+FRL
Sbjct: 61  HHDINTVDCQPSGPQGGMLVFVSGSLRTGPDEHPLKFSQMFQLLPA-GGNFYVQNDMFRL 120

Query: 121 NY 123
           NY
Sbjct: 121 NY 121

[Close]

BLAST of MC05g0823 vs. ExPASy Swiss-Prot
Match: Q75AA5 (Nuclear transport factor 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=NTF2 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.9e-34
Identity = 69/123 (56.10%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MD  A+A+ F E YY+ FD +R+ L NLY+D SMLTFE  ++QGA++IV KL  LPFQ+ 
Sbjct: 3   MDFSALAQQFTEFYYNQFDTDRSQLGNLYRDQSMLTFETSQLQGAKDIVEKLVSLPFQKV 62

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           QH +TT+D QP+ PNG VLV ++G+L +  EQ+A +FSQ+FHLMP    S++V NDIFRL
Sbjct: 63  QHRITTLDAQPASPNGDVLVMITGDLLIDDEQNAQRFSQVFHLMP-EGNSYYVFNDIFRL 122

Query: 121 NYA 124
           NY+
Sbjct: 123 NYS 124

[Close]

BLAST of MC05g0823 vs. ExPASy Swiss-Prot
Match: Q96VN3 (Nuclear transport factor 2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=ntf2 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-32
Identity = 67/121 (55.37%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 2   DPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQ 61
           D  ++A+ FV  YY TFD NR GLA LY+D+SMLTFE   IQG   I+ KLT LPFQ+ Q
Sbjct: 3   DFQSIAQQFVTFYYQTFDGNRAGLAPLYRDHSMLTFETSAIQGVAGIIEKLTSLPFQKVQ 62

Query: 62  HSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRLN 121
           H V+T+D QPSG +GG+LV V+G L +  E++ + ++Q F LMP   GS+FVLND+FRL 
Sbjct: 63  HQVSTLDAQPSGEHGGILVLVTGALLVDEEKNPMNYTQTFQLMPDGAGSYFVLNDVFRLI 122

Query: 122 Y 123
           Y
Sbjct: 123 Y 123

[Close]

BLAST of MC05g0823 vs. NCBI nr
Match: XP_022145223.1 (nuclear transport factor 2 [Momordica charantia])

HSP 1 Score: 256 bits (653), Expect = 5.93e-86
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL
Sbjct: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120

Query: 121 NYA 123
           NYA
Sbjct: 121 NYA 123

[Close]

BLAST of MC05g0823 vs. NCBI nr
Match: XP_022932693.1 (nuclear transport factor 2B-like [Cucurbita moschata] >KAG7029101.1 Nuclear transport factor 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245 bits (625), Expect = 1.18e-81
Identity = 116/123 (94.31%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAVAKAFV+HYYSTFDANR+GLANLYQDNSMLTFEGQKIQG+QNIVAKLT LPFQQC
Sbjct: 3   MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 62

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           QHSV+TVDCQPSGP+GGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSF+VLNDIFRL
Sbjct: 63  QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 122

Query: 121 NYA 123
           NYA
Sbjct: 123 NYA 125

[Close]

BLAST of MC05g0823 vs. NCBI nr
Match: XP_022972136.1 (nuclear transport factor 2B-like [Cucurbita maxima] >XP_023539086.1 nuclear transport factor 2B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244 bits (622), Expect = 3.40e-81
Identity = 116/123 (94.31%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAVAKAFV+HYYSTFDANR GLANLYQDNSMLTFEGQKIQG+QNIVAKLT LPFQQC
Sbjct: 3   MDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 62

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           QHSV+TVDCQPSGP+GGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSF+VLNDIFRL
Sbjct: 63  QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 122

Query: 121 NYA 123
           NYA
Sbjct: 123 NYA 125

[Close]

BLAST of MC05g0823 vs. NCBI nr
Match: XP_028093729.1 (nuclear transport factor 2B [Camellia sinensis])

HSP 1 Score: 241 bits (615), Expect = 3.72e-80
Identity = 114/123 (92.68%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAVAKAFVEHYYSTFDANR GLANLYQ++SMLTFEGQKIQG+QNIVAKLT LPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRAGLANLYQESSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           QHS+TTVDCQPSGP GG+LVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSF+VLNDIFRL
Sbjct: 61  QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120

Query: 121 NYA 123
           NYA
Sbjct: 121 NYA 123

[Close]

BLAST of MC05g0823 vs. NCBI nr
Match: XP_022979987.1 (nuclear transport factor 2B [Cucurbita maxima])

HSP 1 Score: 241 bits (614), Expect = 5.28e-80
Identity = 114/123 (92.68%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAVAKAFV+HYYSTFDANR GLANLYQDNSMLTFEGQKIQG+ NIVAKLT LPFQQC
Sbjct: 1   MDPDAVAKAFVDHYYSTFDANRAGLANLYQDNSMLTFEGQKIQGSPNIVAKLTSLPFQQC 60

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           QHSV+TVDCQPSGP GG+LVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSF+VLNDIFRL
Sbjct: 61  QHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120

Query: 121 NYA 123
           NYA
Sbjct: 121 NYA 123

[Close]

BLAST of MC05g0823 vs. ExPASy TrEMBL
Match: A0A6J1CVD4 (nuclear transport factor 2 OS=Momordica charantia OX=3673 GN=LOC111014726 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 2.87e-86
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL
Sbjct: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120

Query: 121 NYA 123
           NYA
Sbjct: 121 NYA 123

[Close]

BLAST of MC05g0823 vs. ExPASy TrEMBL
Match: A0A6J1F2G7 (nuclear transport factor 2B-like OS=Cucurbita moschata OX=3662 GN=LOC111439162 PE=4 SV=1)

HSP 1 Score: 245 bits (625), Expect = 5.73e-82
Identity = 116/123 (94.31%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAVAKAFV+HYYSTFDANR+GLANLYQDNSMLTFEGQKIQG+QNIVAKLT LPFQQC
Sbjct: 3   MDPDAVAKAFVDHYYSTFDANRSGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 62

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           QHSV+TVDCQPSGP+GGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSF+VLNDIFRL
Sbjct: 63  QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 122

Query: 121 NYA 123
           NYA
Sbjct: 123 NYA 125

[Close]

BLAST of MC05g0823 vs. ExPASy TrEMBL
Match: A0A6J1I548 (nuclear transport factor 2B-like OS=Cucurbita maxima OX=3661 GN=LOC111470768 PE=4 SV=1)

HSP 1 Score: 244 bits (622), Expect = 1.64e-81
Identity = 116/123 (94.31%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAVAKAFV+HYYSTFDANR GLANLYQDNSMLTFEGQKIQG+QNIVAKLT LPFQQC
Sbjct: 3   MDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 62

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           QHSV+TVDCQPSGP+GGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSF+VLNDIFRL
Sbjct: 63  QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 122

Query: 121 NYA 123
           NYA
Sbjct: 123 NYA 125

[Close]

BLAST of MC05g0823 vs. ExPASy TrEMBL
Match: A0A6J1IQ79 (nuclear transport factor 2B OS=Cucurbita maxima OX=3661 GN=LOC111479515 PE=4 SV=1)

HSP 1 Score: 241 bits (614), Expect = 2.56e-80
Identity = 114/123 (92.68%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAVAKAFV+HYYSTFDANR GLANLYQDNSMLTFEGQKIQG+ NIVAKLT LPFQQC
Sbjct: 1   MDPDAVAKAFVDHYYSTFDANRAGLANLYQDNSMLTFEGQKIQGSPNIVAKLTSLPFQQC 60

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           QHSV+TVDCQPSGP GG+LVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSF+VLNDIFRL
Sbjct: 61  QHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120

Query: 121 NYA 123
           NYA
Sbjct: 121 NYA 123

[Close]

BLAST of MC05g0823 vs. ExPASy TrEMBL
Match: A0A5J5AU07 (NTF2 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_033141 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 3.63e-80
Identity = 113/123 (91.87%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAVAKAFVEHYY+TFDANRTGLANLYQ++SMLTFEGQKIQG+QNIVAKLT LPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYTTFDANRTGLANLYQESSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           QHS+TTVDCQPSGP GG+LVFVSGNL+LAGEQHALKFSQMFHLMPTPQGSF+VLNDIFRL
Sbjct: 61  QHSITTVDCQPSGPAGGMLVFVSGNLKLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120

Query: 121 NYA 123
           NYA
Sbjct: 121 NYA 123

[Close]

BLAST of MC05g0823 vs. TAIR 10
Match: AT1G27970.1 (nuclear transport factor 2B )

HSP 1 Score: 222.2 bits (565), Expect = 2.2e-58
Identity = 104/123 (84.55%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAV+KAFVEHYYSTFD NR GLA LYQ+ SMLTFEGQKIQG Q+IVAKLT LPFQQC
Sbjct: 4   MDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAKLTSLPFQQC 63

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           +H ++TVDCQPSGP  G+LVFVSGNLQLAGE+HALKFSQMFHLMPTPQGSF+V NDIFRL
Sbjct: 64  KHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIFRL 123

Query: 121 NYA 124
           NYA
Sbjct: 124 NYA 126

[Close]

BLAST of MC05g0823 vs. TAIR 10
Match: AT1G27310.1 (nuclear transport factor 2A )

HSP 1 Score: 218.4 bits (555), Expect = 3.2e-57
Identity = 104/123 (84.55%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAVAKAFVEHYYSTFDANR GL +LYQ+ SMLTFEGQKIQG+QNIVAKLTGLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRPGLVSLYQEGSMLTFEGQKIQGSQNIVAKLTGLPFQQC 60

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 120
           +H++TTVDCQPSGP GG+LVFVSGNLQLAGEQHALKFSQMFHL+ + QG+++V NDIFRL
Sbjct: 61  KHNITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLI-SNQGNYYVFNDIFRL 120

Query: 121 NYA 124
           NYA
Sbjct: 121 NYA 122

[Close]

BLAST of MC05g0823 vs. TAIR 10
Match: AT1G27970.2 (nuclear transport factor 2B )

HSP 1 Score: 211.8 bits (538), Expect = 3.0e-55
Identity = 99/118 (83.90%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MDPDAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQC 60
           MDPDAV+KAFVEHYYSTFD NR GLA LYQ+ SMLTFEGQKIQG Q+IVAKLT LPFQQC
Sbjct: 4   MDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAKLTSLPFQQC 63

Query: 61  QHSVTTVDCQPSGPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIF 119
           +H ++TVDCQPSGP  G+LVFVSGNLQLAGE+HALKFSQMFHLMPTPQGSF+V NDIF
Sbjct: 64  KHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIF 121

[Close]

BLAST of MC05g0823 vs. TAIR 10
Match: AT1G11570.2 (NTF2-like )

HSP 1 Score: 148.3 bits (373), Expect = 4.1e-36
Identity = 73/122 (59.84%), Postives = 88/122 (72.13%), Query Frame = 0


Query: 4   DAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHS 63
           + VA AFV HYY  FD +R+ L++LY   S+LTFEGQ I G  NI  KL  LPF QC H 
Sbjct: 10  EEVASAFVNHYYHLFDNDRSSLSSLYNPTSLLTFEGQTIYGVDNISNKLKQLPFDQCHHL 69

Query: 64  VTTVDCQPS---GPNGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVLNDIFRL 123
           ++TVD QPS   G  GG+LVFVSG++QL GE H L+FSQ FHL+P  QGSFFV N++FRL
Sbjct: 70  ISTVDSQPSSMAGGCGGILVFVSGSIQLHGEDHPLRFSQTFHLIPVLQGSFFVQNEMFRL 129

[Close]

BLAST of MC05g0823 vs. TAIR 10
Match: AT1G11570.1 (NTF2-like )

HSP 1 Score: 115.9 bits (289), Expect = 2.2e-26
Identity = 58/103 (56.31%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 4   DAVAKAFVEHYYSTFDANRTGLANLYQDNSMLTFEGQKIQGAQNIVAKLTGLPFQQCQHS 63
           + VA AFV HYY  FD +R+ L++LY   S+LTFEGQ I G  NI  KL  LPF QC H 
Sbjct: 10  EEVASAFVNHYYHLFDNDRSSLSSLYNPTSLLTFEGQTIYGVDNISNKLKQLPFDQCHHL 69

Query: 64  VTTVDCQPS---GPNGGVLVFVSGNLQLAGEQHALKFSQMFHL 104
           ++TVD QPS   G  GG+LVFVSG++QL GE H L+FSQ++ L
Sbjct: 70  ISTVDSQPSSMAGGCGGILVFVSGSIQLHGEDHPLRFSQVYLL 112

The following BLAST results are available for this feature:

BLAST of MC05g0823 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7F5	3.1e-57	84.55	Nuclear transport factor 2B OS=Arabidopsis thaliana OX=3702 GN=NTF2B PE=1 SV=1	[more]
Q9FZK4	4.5e-56	84.55	Nuclear transport factor 2A OS=Arabidopsis thaliana OX=3702 GN=NTF2A PE=1 SV=1	[more]
Q9XJ54	2.4e-41	66.39	Nuclear transport factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=NTF2 PE=2...	[more]
Q75AA5	4.9e-34	56.10	Nuclear transport factor 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / ...	[more]
Q96VN3	1.2e-32	55.37	Nuclear transport factor 2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /...	[more]

BLAST of MC05g0823 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145223.1	5.93e-86	100.00	nuclear transport factor 2 [Momordica charantia]	[more]
XP_022932693.1	1.18e-81	94.31	nuclear transport factor 2B-like [Cucurbita moschata] >KAG7029101.1 Nuclear tran...	[more]
XP_022972136.1	3.40e-81	94.31	nuclear transport factor 2B-like [Cucurbita maxima] >XP_023539086.1 nuclear tran...	[more]
XP_028093729.1	3.72e-80	92.68	nuclear transport factor 2B [Camellia sinensis]	[more]
XP_022979987.1	5.28e-80	92.68	nuclear transport factor 2B [Cucurbita maxima]	[more]

BLAST of MC05g0823 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVD4	2.87e-86	100.00	nuclear transport factor 2 OS=Momordica charantia OX=3673 GN=LOC111014726 PE=4 S...	[more]
A0A6J1F2G7	5.73e-82	94.31	nuclear transport factor 2B-like OS=Cucurbita moschata OX=3662 GN=LOC111439162 P...	[more]
A0A6J1I548	1.64e-81	94.31	nuclear transport factor 2B-like OS=Cucurbita maxima OX=3661 GN=LOC111470768 PE=...	[more]
A0A6J1IQ79	2.56e-80	92.68	nuclear transport factor 2B OS=Cucurbita maxima OX=3661 GN=LOC111479515 PE=4 SV=...	[more]
A0A5J5AU07	3.63e-80	91.87	NTF2 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_033141 PE=4 ...	[more]

BLAST of MC05g0823 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27970.1	2.2e-58	84.55	nuclear transport factor 2B	[more]
AT1G27310.1	3.2e-57	84.55	nuclear transport factor 2A	[more]
AT1G27970.2	3.0e-55	83.90	nuclear transport factor 2B	[more]
AT1G11570.2	4.1e-36	59.84	NTF2-like	[more]
AT1G11570.1	2.2e-26	56.31	NTF2-like	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.50		coord: 1..123 e-value: 1.9E-45 score: 156.0
None	No IPR available	PANTHER	PTHR12612:SF36	NUCLEAR TRANSPORT FACTOR 2B	coord: 1..123
None	No IPR available	PANTHER	PTHR12612	NUCLEAR TRANSPORT FACTOR 2	coord: 1..123
IPR002075	Nuclear transport factor 2	PFAM	PF02136	NTF2	coord: 6..120 e-value: 4.0E-39 score: 133.9
IPR018222	Nuclear transport factor 2, eukaryote	PROSITE	PS50177	NTF2_DOMAIN	coord: 6..120 score: 34.406738
IPR018222	Nuclear transport factor 2, eukaryote	CDD	cd00780	NTF2	coord: 2..122 e-value: 2.96291E-49 score: 151.281
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 3..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0823.1	MC05g0823.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0044613	nuclear pore central transport channel