MC05g0822 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0822
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC05: 7119265 .. 7119651 (+)
RNA-Seq Expression	MC05g0822
Synteny	MC05g0822

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGTGGAATCAACAAGAGAAGAACAGAGGCGCAAGCACTCCCAACTTTCAGCTCAACAAGAGGATGTGGAAAGAAGTGAAACCAAAGTGGAAAGAGAAGAAGAGGCAGTAGTGAAAGAACTAGAAGAAGTGAAGAGGCAGAATTTCATAACTCACTGCTTAGTTTCAGCAATGATAATCCTCACAGTTGCTTGGCAAGTCTCTGAGGTGTCTTTCATTTTGAAACTCAGAGGTGGGTTGAGCAACCCATTCAAATCCCTAGCCAAAATTCTCAAAAAGAAGACAACTTCAGCAATACATAATCAGATTGAAGCTACTGAATTGCCTCACCTTAATATGCCTGCCCTACCTCATGTGAGCCTACCAGATTTTGACTTGGATGGAGAA

mRNA sequence

CAGGTGGAATCAACAAGAGAAGAACAGAGGCGCAAGCACTCCCAACTTTCAGCTCAACAAGAGGATGTGGAAAGAAGTGAAACCAAAGTGGAAAGAGAAGAAGAGGCAGTAGTGAAAGAACTAGAAGAAGTGAAGAGGCAGAATTTCATAACTCACTGCTTAGTTTCAGCAATGATAATCCTCACAGTTGCTTGGCAAGTCTCTGAGGTGTCTTTCATTTTGAAACTCAGAGGTGGGTTGAGCAACCCATTCAAATCCCTAGCCAAAATTCTCAAAAAGAAGACAACTTCAGCAATACATAATCAGATTGAAGCTACTGAATTGCCTCACCTTAATATGCCTGCCCTACCTCATGTGAGCCTACCAGATTTTGACTTGGATGGAGAA

Coding sequence (CDS)

CAGGTGGAATCAACAAGAGAAGAACAGAGGCGCAAGCACTCCCAACTTTCAGCTCAACAAGAGGATGTGGAAAGAAGTGAAACCAAAGTGGAAAGAGAAGAAGAGGCAGTAGTGAAAGAACTAGAAGAAGTGAAGAGGCAGAATTTCATAACTCACTGCTTAGTTTCAGCAATGATAATCCTCACAGTTGCTTGGCAAGTCTCTGAGGTGTCTTTCATTTTGAAACTCAGAGGTGGGTTGAGCAACCCATTCAAATCCCTAGCCAAAATTCTCAAAAAGAAGACAACTTCAGCAATACATAATCAGATTGAAGCTACTGAATTGCCTCACCTTAATATGCCTGCCCTACCTCATGTGAGCCTACCAGATTTTGACTTGGATGGAGAA

Protein sequence

QVESTREEQRRKHSQLSAQQEDVERSETKVEREEEAVVKELEEVKRQNFITHCLVSAMIILTVAWQVSEVSFILKLRGGLSNPFKSLAKILKKKTTSAIHNQIEATELPHLNMPALPHVSLPDFDLDGE

Homology

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BLAST of MC05g0822 vs. NCBI nr
Match: XP_022145221.1 (uncharacterized protein LOC111014725 [Momordica charantia])

HSP 1 Score: 236 bits (601), Expect = 2.15e-77
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   QVESTREEQRRKHSQLSAQQEDVERSETKVEREEEAVVKELEEVKRQNFITHCLVSAMII 60
           QVESTREEQRRKHSQLSAQQEDVERSETKVEREEEAVVKELEEVKRQNFITHCLVSAMII
Sbjct: 31  QVESTREEQRRKHSQLSAQQEDVERSETKVEREEEAVVKELEEVKRQNFITHCLVSAMII 90

Query: 61  LTVAWQVSEVSFILKLRGGLSNPFKSLAKILKKKTTSAIHNQIEATELPHLNMPALPHVS 120
           LTVAWQVSEVSFILKLRGGLSNPFKSLAKILKKKTTSAIHNQIEATELPHLNMPALPHVS
Sbjct: 91  LTVAWQVSEVSFILKLRGGLSNPFKSLAKILKKKTTSAIHNQIEATELPHLNMPALPHVS 150

Query: 121 LPDFDLDGE 129
           LPDFDLDGE
Sbjct: 151 LPDFDLDGE 159

[Close]

BLAST of MC05g0822 vs. NCBI nr
Match: XP_038895500.1 (uncharacterized protein LOC120083719 [Benincasa hispida])

HSP 1 Score: 181 bits (460), Expect = 1.72e-55
Identity = 104/142 (73.24%), Postives = 117/142 (82.39%), Query Frame = 0


Query: 1   QVESTREEQRRKHSQLSAQQEDVERSETKVERE--------------EEAVVKELEEVKR 60
           QVESTREEQR  HSQ+SAQQ+D +  ET++E +              E+ +VKEL+EVKR
Sbjct: 48  QVESTREEQRLNHSQISAQQKDEKIIETELEPQSENVERSGRNRVKIEKVIVKELKEVKR 107

Query: 61  QNFITHCLVSAMIILTVAWQVSEVSFILKLRGGLSNPFKSLAKILKKKTTSAIHNQIEAT 120
           QNFITHCLVSAMIILTVAWQVSEVSFILKLR GLSNPFKSL  ILK+KTTSAI +QIEAT
Sbjct: 108 QNFITHCLVSAMIILTVAWQVSEVSFILKLRNGLSNPFKSLGTILKRKTTSAIQHQIEAT 167

Query: 121 ELPHLNMPALPHVSLPDFDLDG 128
           ELPHLNMPALPHV+LP+FDLDG
Sbjct: 168 ELPHLNMPALPHVNLPEFDLDG 189

[Close]

BLAST of MC05g0822 vs. NCBI nr
Match: KAE8649098.1 (hypothetical protein Csa_015237 [Cucumis sativus])

HSP 1 Score: 161 bits (407), Expect = 1.46e-47
Identity = 99/136 (72.79%), Postives = 113/136 (83.09%), Query Frame = 0


Query: 2   VESTREEQRRKHSQ----------LSAQQED-VERSETKVEREEEAVVKELEEVKRQNFI 61
           VESTR EQR  HS+          L A++E+ VERSE K++ EE  +VKEL+EVK+QNFI
Sbjct: 46  VESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEE--IVKELKEVKKQNFI 105

Query: 62  THCLVSAMIILTVAWQVSEVSFILKLRGGL-SNPFKSLAKILKKKTTSAIHNQIEATELP 121
           THCLVSAMIILTVAWQ+SEVSFILKLR GL SNPFKSLA ILK+KTTSAI +QIEATELP
Sbjct: 106 THCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELP 165

Query: 122 HLNMPALPHVSLPDFD 125
           HLN+PALPHV+LPDFD
Sbjct: 166 HLNIPALPHVTLPDFD 179

[Close]

BLAST of MC05g0822 vs. NCBI nr
Match: XP_004152113.1 (uncharacterized protein LOC101214522 [Cucumis sativus])

HSP 1 Score: 161 bits (407), Expect = 1.86e-47
Identity = 99/136 (72.79%), Postives = 113/136 (83.09%), Query Frame = 0


Query: 2   VESTREEQRRKHSQ----------LSAQQED-VERSETKVEREEEAVVKELEEVKRQNFI 61
           VESTR EQR  HS+          L A++E+ VERSE K++ EE  +VKEL+EVK+QNFI
Sbjct: 54  VESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEE--IVKELKEVKKQNFI 113

Query: 62  THCLVSAMIILTVAWQVSEVSFILKLRGGL-SNPFKSLAKILKKKTTSAIHNQIEATELP 121
           THCLVSAMIILTVAWQ+SEVSFILKLR GL SNPFKSLA ILK+KTTSAI +QIEATELP
Sbjct: 114 THCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELP 173

Query: 122 HLNMPALPHVSLPDFD 125
           HLN+PALPHV+LPDFD
Sbjct: 174 HLNIPALPHVTLPDFD 187

[Close]

BLAST of MC05g0822 vs. NCBI nr
Match: TYK17012.1 (uncharacterized protein E5676_scaffold130G001570 [Cucumis melo var. makuwa])

HSP 1 Score: 158 bits (400), Expect = 1.20e-46
Identity = 98/140 (70.00%), Postives = 111/140 (79.29%), Query Frame = 0


Query: 2   VESTREEQRRKH-----------SQLSAQQED-VERSETKVEREEEAVVKELEEVKRQNF 61
           VESTREEQR  H           + L A+ E+ VERSE KV+ EE  +VKEL+EVK+QNF
Sbjct: 33  VESTREEQRLNHYSKQEDGEIIETNLEAEGENNVERSEIKVKTEE--IVKELKEVKKQNF 92

Query: 62  ITHCLVSAMIILTVAWQVSEVSFILKLRGGL-SNPFKSLAKILKKKTTSAIHNQIEATEL 121
           +THCLVSAMIILTVAWQ+SEVSFILKLR GL SNPFKSL  ILK+KTTSAI +QIEATEL
Sbjct: 93  VTHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLGTILKRKTTSAIQHQIEATEL 152

Query: 122 PHLNMPALPHVSLPDFDLDG 128
           P LN+PA+PHVSLPDFD D 
Sbjct: 153 PQLNIPAIPHVSLPDFDDDS 170

[Close]

BLAST of MC05g0822 vs. ExPASy TrEMBL
Match: A0A6J1CVQ0 (uncharacterized protein LOC111014725 OS=Momordica charantia OX=3673 GN=LOC111014725 PE=4 SV=1)

HSP 1 Score: 236 bits (601), Expect = 1.04e-77
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   QVESTREEQRRKHSQLSAQQEDVERSETKVEREEEAVVKELEEVKRQNFITHCLVSAMII 60
           QVESTREEQRRKHSQLSAQQEDVERSETKVEREEEAVVKELEEVKRQNFITHCLVSAMII
Sbjct: 31  QVESTREEQRRKHSQLSAQQEDVERSETKVEREEEAVVKELEEVKRQNFITHCLVSAMII 90

Query: 61  LTVAWQVSEVSFILKLRGGLSNPFKSLAKILKKKTTSAIHNQIEATELPHLNMPALPHVS 120
           LTVAWQVSEVSFILKLRGGLSNPFKSLAKILKKKTTSAIHNQIEATELPHLNMPALPHVS
Sbjct: 91  LTVAWQVSEVSFILKLRGGLSNPFKSLAKILKKKTTSAIHNQIEATELPHLNMPALPHVS 150

Query: 121 LPDFDLDGE 129
           LPDFDLDGE
Sbjct: 151 LPDFDLDGE 159

[Close]

BLAST of MC05g0822 vs. ExPASy TrEMBL
Match: A0A0A0KTW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012410 PE=4 SV=1)

HSP 1 Score: 161 bits (407), Expect = 9.00e-48
Identity = 99/136 (72.79%), Postives = 113/136 (83.09%), Query Frame = 0


Query: 2   VESTREEQRRKHSQ----------LSAQQED-VERSETKVEREEEAVVKELEEVKRQNFI 61
           VESTR EQR  HS+          L A++E+ VERSE K++ EE  +VKEL+EVK+QNFI
Sbjct: 54  VESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEE--IVKELKEVKKQNFI 113

Query: 62  THCLVSAMIILTVAWQVSEVSFILKLRGGL-SNPFKSLAKILKKKTTSAIHNQIEATELP 121
           THCLVSAMIILTVAWQ+SEVSFILKLR GL SNPFKSLA ILK+KTTSAI +QIEATELP
Sbjct: 114 THCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELP 173

Query: 122 HLNMPALPHVSLPDFD 125
           HLN+PALPHV+LPDFD
Sbjct: 174 HLNIPALPHVTLPDFD 187

[Close]

BLAST of MC05g0822 vs. ExPASy TrEMBL
Match: A0A5D3CZN3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001570 PE=4 SV=1)

HSP 1 Score: 158 bits (400), Expect = 5.82e-47
Identity = 98/140 (70.00%), Postives = 111/140 (79.29%), Query Frame = 0


Query: 2   VESTREEQRRKH-----------SQLSAQQED-VERSETKVEREEEAVVKELEEVKRQNF 61
           VESTREEQR  H           + L A+ E+ VERSE KV+ EE  +VKEL+EVK+QNF
Sbjct: 33  VESTREEQRLNHYSKQEDGEIIETNLEAEGENNVERSEIKVKTEE--IVKELKEVKKQNF 92

Query: 62  ITHCLVSAMIILTVAWQVSEVSFILKLRGGL-SNPFKSLAKILKKKTTSAIHNQIEATEL 121
           +THCLVSAMIILTVAWQ+SEVSFILKLR GL SNPFKSL  ILK+KTTSAI +QIEATEL
Sbjct: 93  VTHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLGTILKRKTTSAIQHQIEATEL 152

Query: 122 PHLNMPALPHVSLPDFDLDG 128
           P LN+PA+PHVSLPDFD D 
Sbjct: 153 PQLNIPAIPHVSLPDFDDDS 170

[Close]

BLAST of MC05g0822 vs. ExPASy TrEMBL
Match: A0A5A7TSP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003210 PE=4 SV=1)

HSP 1 Score: 158 bits (400), Expect = 8.15e-47
Identity = 98/140 (70.00%), Postives = 111/140 (79.29%), Query Frame = 0


Query: 2   VESTREEQRRKH-----------SQLSAQQED-VERSETKVEREEEAVVKELEEVKRQNF 61
           VESTREEQR  H           + L A+ E+ VERSE KV+ EE  +VKEL+EVK+QNF
Sbjct: 44  VESTREEQRLNHYSKQEDGEIIETNLEAEGENNVERSEIKVKTEE--IVKELKEVKKQNF 103

Query: 62  ITHCLVSAMIILTVAWQVSEVSFILKLRGGL-SNPFKSLAKILKKKTTSAIHNQIEATEL 121
           +THCLVSAMIILTVAWQ+SEVSFILKLR GL SNPFKSL  ILK+KTTSAI +QIEATEL
Sbjct: 104 VTHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLGTILKRKTTSAIQHQIEATEL 163

Query: 122 PHLNMPALPHVSLPDFDLDG 128
           P LN+PA+PHVSLPDFD D 
Sbjct: 164 PQLNIPAIPHVSLPDFDDDS 181

[Close]

BLAST of MC05g0822 vs. ExPASy TrEMBL
Match: A0A1S3BXR6 (uncharacterized protein LOC103494562 OS=Cucumis melo OX=3656 GN=LOC103494562 PE=4 SV=1)

HSP 1 Score: 158 bits (400), Expect = 1.04e-46
Identity = 98/140 (70.00%), Postives = 111/140 (79.29%), Query Frame = 0


Query: 2   VESTREEQRRKH-----------SQLSAQQED-VERSETKVEREEEAVVKELEEVKRQNF 61
           VESTREEQR  H           + L A+ E+ VERSE KV+ EE  +VKEL+EVK+QNF
Sbjct: 52  VESTREEQRLNHYSKQEDGEIIETNLEAEGENNVERSEIKVKTEE--IVKELKEVKKQNF 111

Query: 62  ITHCLVSAMIILTVAWQVSEVSFILKLRGGL-SNPFKSLAKILKKKTTSAIHNQIEATEL 121
           +THCLVSAMIILTVAWQ+SEVSFILKLR GL SNPFKSL  ILK+KTTSAI +QIEATEL
Sbjct: 112 VTHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLGTILKRKTTSAIQHQIEATEL 171

Query: 122 PHLNMPALPHVSLPDFDLDG 128
           P LN+PA+PHVSLPDFD D 
Sbjct: 172 PQLNIPAIPHVSLPDFDDDS 189

[Close]

BLAST of MC05g0822 vs. TAIR 10
Match: AT1G27300.1 (unknown protein; Has 54 Blast hits to 54 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 6; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 2.9e-08
Identity = 37/103 (35.92%), Postives = 61/103 (59.22%), Query Frame = 0


Query: 7   EEQRRKHSQLSAQQEDVERSETKVEREEEAVVKELEEVKRQNFITHCLVSAMIILTVAWQ 66
           EE++ + S  S+  +     + ++E   E + K++++VK+QN ITH L+SA IILT+ WQ
Sbjct: 64  EEEKEEESADSSPSKGKSEGQRQLEESIEEIAKDIKKVKKQNKITHVLLSATIILTLVWQ 123

Query: 67  VSEVSFILKLRGGLSNPFKSLAKILK---KKTTSAIHNQIEAT 107
           +SE S I  L+  +S+P +S+  +L    K     I NQ+  T
Sbjct: 124 LSEYSMIFMLKDRISHPVRSIGGMLNGMFKGKLRPIKNQLAGT 166

The following BLAST results are available for this feature:

BLAST of MC05g0822 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g0822 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145221.1	2.15e-77	100.00	uncharacterized protein LOC111014725 [Momordica charantia]	[more]
XP_038895500.1	1.72e-55	73.24	uncharacterized protein LOC120083719 [Benincasa hispida]	[more]
KAE8649098.1	1.46e-47	72.79	hypothetical protein Csa_015237 [Cucumis sativus]	[more]
XP_004152113.1	1.86e-47	72.79	uncharacterized protein LOC101214522 [Cucumis sativus]	[more]
TYK17012.1	1.20e-46	70.00	uncharacterized protein E5676_scaffold130G001570 [Cucumis melo var. makuwa]	[more]

BLAST of MC05g0822 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVQ0	1.04e-77	100.00	uncharacterized protein LOC111014725 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A0A0KTW6	9.00e-48	72.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012410 PE=4 SV=1	[more]
A0A5D3CZN3	5.82e-47	70.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TSP6	8.15e-47	70.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BXR6	1.04e-46	70.00	uncharacterized protein LOC103494562 OS=Cucumis melo OX=3656 GN=LOC103494562 PE=...	[more]

BLAST of MC05g0822 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27300.1	2.9e-08	35.92	unknown protein; Has 54 Blast hits to 54 proteins in 19 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 6..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR35280	F17L21.9	coord: 1..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0822.1	MC05g0822.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane