MC05g0758 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g0758
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionSWIM-type domain-containing protein
LocationMC05: 6176376 .. 6176745 (-)
RNA-Seq ExpressionMC05g0758
SyntenyMC05g0758
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGAAGTTGGTATTCTTAACCGTAAATGTACATGTAGACCATGGGACTTAGACTTGATCCCATGCCCACAAGCATGGTCTAACTATTGGTCGGAGAAGGTTGGATCTAAATACGTTTGTTCATGATTTCTACCAAATGTCAACATTGTAATTATTATAGCACGATGACATACATCCAATTGGTTAGACTGACAACATTGCGTCAACAATTGGTCAAGATGAGGGAGACATCCTCCCTCCAAATGTAATGCGCTCTGGTGGTAGGCTATCGAAAAAGAGACTTGTTGCTCTTGTTGAAAAGAGATCGACAATAAAATATGGTAGATGTGGTCGGTCAAGACACAATCGGAGACGGTGTAAAAACGCACTC

mRNA sequence

TTTGAAGTTGGTATTCTTAACCGTAAATGTACATGTAGACCATGGGACTTAGACTTGATCCCATGCCCACAAGCACTAACTATTGGTCGGAGAAGGTTGGATCTAAATACGTTTGTTCATGATTTCTACCAAATGTCAACATTGAATTATTATAGCACGATGACATACATCCAATTGACTGACAACATTGCGTCAACAATTGGTCAAGATGAGGGAGACATCCTCCCTCCAAATGTAATGCGCTCTGGTGGTAGGCTATCGAAAAAGAGACTTGTTGCTCTTGTTGAAAAGAGATCGACAATAAAATATGGTAGATGTGGTCGGTCAAGACACAATCGGAGACGGTGTAAAAACGCACTC

Coding sequence (CDS)

TTTGAAGTTGGTATTCTTAACCGTAAATGTACATGTAGACCATGGGACTTAGACTTGATCCCATGCCCACAAGCACTAACTATTGGTCGGAGAAGGTTGGATCTAAATACGTTTGTTCATGATTTCTACCAAATGTCAACATTGAATTATTATAGCACGATGACATACATCCAATTGACTGACAACATTGCGTCAACAATTGGTCAAGATGAGGGAGACATCCTCCCTCCAAATGTAATGCGCTCTGGTGGTAGGCTATCGAAAAAGAGACTTGTTGCTCTTGTTGAAAAGAGATCGACAATAAAATATGGTAGATGTGGTCGGTCAAGACACAATCGGAGACGGTGTAAAAACGCACTC

Protein sequence

FEVGILNRKCTCRPWDLDLIPCPQALTIGRRRLDLNTFVHDFYQMSTLNYYSTMTYIQLTDNIASTIGQDEGDILPPNVMRSGGRLSKKRLVALVEKRSTIKYGRCGRSRHNRRRCKNAL
Homology
BLAST of MC05g0758 vs. NCBI nr
Match: XP_022157216.1 (uncharacterized protein LOC111023978 [Momordica charantia])

HSP 1 Score: 108 bits (269), Expect = 3.84e-26
Identity = 58/121 (47.93%), Postives = 75/121 (61.98%), Query Frame = 0

Query: 1   FEVGILNRKCTCRPWDLDLIPCPQA-LTIGRRRLDLNTFVHDFYQMSTLN--YYSTMTYI 60
           F V IL+  C  + WD+D IPC  A L I RR L+L++FVH FY + TL   Y   +  I
Sbjct: 122 FNVNILHCTCNFKQWDIDFIPCSHACLAISRRGLELHSFVHKFYHVKTLQLLYSWNVHPI 181

Query: 61  QLTDNIASTIGQDEGDILPPNVMRSGGRLSKKRLVALVEKRSTIKYGRCGRSRHNRRRCK 118
              +NI   +  D+  ILPPNV RS GR  KKRL++ VE  +T++ GRC +  HNRRRCK
Sbjct: 182 GQIENILPPVQPDDTGILPPNVKRSAGRPRKKRLISRVEATNTVRCGRCHKLGHNRRRCK 241

BLAST of MC05g0758 vs. NCBI nr
Match: XP_008448115.1 (PREDICTED: uncharacterized protein LOC103490404 [Cucumis melo])

HSP 1 Score: 99.0 bits (245), Expect = 1.11e-22
Identity = 53/123 (43.09%), Postives = 71/123 (57.72%), Query Frame = 0

Query: 1   FEVGILNRKCTCRPWDLDLIPCPQA-LTIGRRRLDLNTFVHDFYQMSTL-NYYSTMTY-I 60
           F + ILNR C+CR WDLDLIPC  A + +  R L+L+ ++  FY +S L N Y   T  I
Sbjct: 112 FVINILNRTCSCRQWDLDLIPCSHACIALSTRNLNLHLYIDKFYYVSNLINLYKKGTRPI 171

Query: 61  QLTDNIASTIGQDEGDILPPNVMRSGGRLSKKRLVALVEKRSTIKYGRCGRSRHNRRRCK 120
              + I +T       ILPP V R  GRL KKR  + +EK++T+   RCG+  HN R CK
Sbjct: 172 GTVNQIRNTHQGGNDGILPPQVKRPAGRLKKKRFTSFLEKKATVHCSRCGKKGHNCRSCK 231

BLAST of MC05g0758 vs. NCBI nr
Match: KAA0066503.1 (uncharacterized protein E6C27_scaffold25G00500 [Cucumis melo var. makuwa] >TYK06137.1 uncharacterized protein E5676_scaffold572G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 98.2 bits (243), Expect = 1.85e-21
Identity = 53/123 (43.09%), Postives = 71/123 (57.72%), Query Frame = 0

Query: 1   FEVGILNRKCTCRPWDLDLIPCPQA-LTIGRRRLDLNTFVHDFYQMST-LNYYSTMTY-I 60
           F V ILNR C+CR WDLDLIPC  A + +  R L+L+ +   FY +S  +N Y   T  I
Sbjct: 245 FVVNILNRTCSCRQWDLDLIPCSHACIALSTRNLNLHLYTDKFYYVSNWINLYKKGTRPI 304

Query: 61  QLTDNIASTIGQDEGDILPPNVMRSGGRLSKKRLVALVEKRSTIKYGRCGRSRHNRRRCK 120
              + I +T       ILPP V R  GRL KKR  + +EK++T++  RCG+  HN R CK
Sbjct: 305 GSVNQIRNTHQGGNDGILPPQVKRPAGRLKKKRFTSFLEKKATVRCSRCGKKGHNCRSCK 364

BLAST of MC05g0758 vs. NCBI nr
Match: TYK23191.1 (uncharacterized protein E5676_scaffold142G002210 [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 1.01e-20
Identity = 52/123 (42.28%), Postives = 70/123 (56.91%), Query Frame = 0

Query: 1   FEVGILNRKCTCRPWDLDLIPCPQA-LTIGRRRLDLNTFVHDFYQMSTL-NYYSTMTY-I 60
           F + ILNR C+CR WDLDLIPC  A + +  R L+L+ +   FY +S L N Y   T  I
Sbjct: 334 FVINILNRTCSCRQWDLDLIPCSHACIALSTRNLNLHLYTDKFYYVSNLINLYKKGTRPI 393

Query: 61  QLTDNIASTIGQDEGDILPPNVMRSGGRLSKKRLVALVEKRSTIKYGRCGRSRHNRRRCK 120
              + I +T       ILPP V R  GRL KKR  + +EK++ ++  RCG+  HN R CK
Sbjct: 394 STVNQIRNTHQGGNDGILPPQVKRPAGRLEKKRFTSFLEKKAFVRCSRCGKKGHNCRSCK 453

BLAST of MC05g0758 vs. NCBI nr
Match: XP_008442298.1 (PREDICTED: uncharacterized protein LOC103486212 [Cucumis melo])

HSP 1 Score: 95.1 bits (235), Expect = 1.22e-20
Identity = 52/123 (42.28%), Postives = 70/123 (56.91%), Query Frame = 0

Query: 1   FEVGILNRKCTCRPWDLDLIPCPQA-LTIGRRRLDLNTFVHDFYQMSTL-NYYSTMTY-I 60
           F V ILNR C+CR WDLDLIPC  A + +  R L+L+ +   FY +S L N Y   T  I
Sbjct: 185 FVVNILNRTCSCRQWDLDLIPCSHACIALSTRNLNLHLYTDKFYYVSNLINLYKKGTRPI 244

Query: 61  QLTDNIASTIGQDEGDILPPNVMRSGGRLSKKRLVALVEKRSTIKYGRCGRSRHNRRRCK 120
              + I +T       ILPP V R  GR  KKR  + +EK+++++  RCG+  HN R CK
Sbjct: 245 GTVNQIRNTHQGGNDGILPPQVKRPAGRPKKKRFTSFLEKKASVRCSRCGKKGHNCRSCK 304

BLAST of MC05g0758 vs. ExPASy TrEMBL
Match: A0A6J1DXB4 (uncharacterized protein LOC111023978 OS=Momordica charantia OX=3673 GN=LOC111023978 PE=4 SV=1)

HSP 1 Score: 108 bits (269), Expect = 1.86e-26
Identity = 58/121 (47.93%), Postives = 75/121 (61.98%), Query Frame = 0

Query: 1   FEVGILNRKCTCRPWDLDLIPCPQA-LTIGRRRLDLNTFVHDFYQMSTLN--YYSTMTYI 60
           F V IL+  C  + WD+D IPC  A L I RR L+L++FVH FY + TL   Y   +  I
Sbjct: 122 FNVNILHCTCNFKQWDIDFIPCSHACLAISRRGLELHSFVHKFYHVKTLQLLYSWNVHPI 181

Query: 61  QLTDNIASTIGQDEGDILPPNVMRSGGRLSKKRLVALVEKRSTIKYGRCGRSRHNRRRCK 118
              +NI   +  D+  ILPPNV RS GR  KKRL++ VE  +T++ GRC +  HNRRRCK
Sbjct: 182 GQIENILPPVQPDDTGILPPNVKRSAGRPRKKRLISRVEATNTVRCGRCHKLGHNRRRCK 241

BLAST of MC05g0758 vs. ExPASy TrEMBL
Match: A0A1S3BIZ2 (uncharacterized protein LOC103490404 OS=Cucumis melo OX=3656 GN=LOC103490404 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.37e-23
Identity = 53/123 (43.09%), Postives = 71/123 (57.72%), Query Frame = 0

Query: 1   FEVGILNRKCTCRPWDLDLIPCPQA-LTIGRRRLDLNTFVHDFYQMSTL-NYYSTMTY-I 60
           F + ILNR C+CR WDLDLIPC  A + +  R L+L+ ++  FY +S L N Y   T  I
Sbjct: 112 FVINILNRTCSCRQWDLDLIPCSHACIALSTRNLNLHLYIDKFYYVSNLINLYKKGTRPI 171

Query: 61  QLTDNIASTIGQDEGDILPPNVMRSGGRLSKKRLVALVEKRSTIKYGRCGRSRHNRRRCK 120
              + I +T       ILPP V R  GRL KKR  + +EK++T+   RCG+  HN R CK
Sbjct: 172 GTVNQIRNTHQGGNDGILPPQVKRPAGRLKKKRFTSFLEKKATVHCSRCGKKGHNCRSCK 231

BLAST of MC05g0758 vs. ExPASy TrEMBL
Match: A0A5A7VEN5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00320 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.97e-22
Identity = 53/123 (43.09%), Postives = 71/123 (57.72%), Query Frame = 0

Query: 1   FEVGILNRKCTCRPWDLDLIPCPQA-LTIGRRRLDLNTFVHDFYQMST-LNYYSTMTY-I 60
           F V ILNR C+CR WDLDLIPC  A + +  R L+L+ +   FY +S  +N Y   T  I
Sbjct: 245 FVVNILNRTCSCRQWDLDLIPCSHACIALSTRNLNLHLYTDKFYYVSNWINLYKKGTRPI 304

Query: 61  QLTDNIASTIGQDEGDILPPNVMRSGGRLSKKRLVALVEKRSTIKYGRCGRSRHNRRRCK 120
              + I +T       ILPP V R  GRL KKR  + +EK++T++  RCG+  HN R CK
Sbjct: 305 GSVNQIRNTHQGGNDGILPPQVKRPAGRLKKKRFTSFLEKKATVRCSRCGKKGHNCRSCK 364

BLAST of MC05g0758 vs. ExPASy TrEMBL
Match: A0A5D3DHP7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002210 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.87e-21
Identity = 52/123 (42.28%), Postives = 70/123 (56.91%), Query Frame = 0

Query: 1   FEVGILNRKCTCRPWDLDLIPCPQA-LTIGRRRLDLNTFVHDFYQMSTL-NYYSTMTY-I 60
           F + ILNR C+CR WDLDLIPC  A + +  R L+L+ +   FY +S L N Y   T  I
Sbjct: 334 FVINILNRTCSCRQWDLDLIPCSHACIALSTRNLNLHLYTDKFYYVSNLINLYKKGTRPI 393

Query: 61  QLTDNIASTIGQDEGDILPPNVMRSGGRLSKKRLVALVEKRSTIKYGRCGRSRHNRRRCK 120
              + I +T       ILPP V R  GRL KKR  + +EK++ ++  RCG+  HN R CK
Sbjct: 394 STVNQIRNTHQGGNDGILPPQVKRPAGRLEKKRFTSFLEKKAFVRCSRCGKKGHNCRSCK 453

BLAST of MC05g0758 vs. ExPASy TrEMBL
Match: A0A1S3B5C9 (uncharacterized protein LOC103486212 OS=Cucumis melo OX=3656 GN=LOC103486212 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.92e-21
Identity = 52/123 (42.28%), Postives = 70/123 (56.91%), Query Frame = 0

Query: 1   FEVGILNRKCTCRPWDLDLIPCPQA-LTIGRRRLDLNTFVHDFYQMSTL-NYYSTMTY-I 60
           F V ILNR C+CR WDLDLIPC  A + +  R L+L+ +   FY +S L N Y   T  I
Sbjct: 185 FVVNILNRTCSCRQWDLDLIPCSHACIALSTRNLNLHLYTDKFYYVSNLINLYKKGTRPI 244

Query: 61  QLTDNIASTIGQDEGDILPPNVMRSGGRLSKKRLVALVEKRSTIKYGRCGRSRHNRRRCK 120
              + I +T       ILPP V R  GR  KKR  + +EK+++++  RCG+  HN R CK
Sbjct: 245 GTVNQIRNTHQGGNDGILPPQVKRPAGRPKKKRFTSFLEKKASVRCSRCGKKGHNCRSCK 304

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022157216.13.84e-2647.93uncharacterized protein LOC111023978 [Momordica charantia][more]
XP_008448115.11.11e-2243.09PREDICTED: uncharacterized protein LOC103490404 [Cucumis melo][more]
KAA0066503.11.85e-2143.09uncharacterized protein E6C27_scaffold25G00500 [Cucumis melo var. makuwa] >TYK06... [more]
TYK23191.11.01e-2042.28uncharacterized protein E5676_scaffold142G002210 [Cucumis melo var. makuwa][more]
XP_008442298.11.22e-2042.28PREDICTED: uncharacterized protein LOC103486212 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A6J1DXB41.86e-2647.93uncharacterized protein LOC111023978 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A1S3BIZ25.37e-2343.09uncharacterized protein LOC103490404 OS=Cucumis melo OX=3656 GN=LOC103490404 PE=... [more]
A0A5A7VEN58.97e-2243.09Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DHP74.87e-2142.28Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B5C95.92e-2142.28uncharacterized protein LOC103486212 OS=Cucumis melo OX=3656 GN=LOC103486212 PE=... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g0758.1MC05g0758.1mRNA