MC05g0718 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0718
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC05: 5696548 .. 5696805 (-)
RNA-Seq Expression	MC05g0718
Synteny	MC05g0718

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGGAAGAAAATCTTCAAAGTGCTTTTCGATCTGCAGCATTTTGAAGAGCTGCTGCTTCCCAATGGGGGGGAGATCATCAGAGGATGGTGGGTATTGGGACGAAAGTGCAGAGATTAGAAGAAGGATGTGGCCAAGCGATGAAGACAGAGGGCGGTGGGTGGCAGAGCCTGGCATCGACCGCAAGGCTTCTGCTTTCATTGCCAGATTCTATGAAGCTCGAGTTTCTGACCCTCAACGCCAAACTTTTGCTGTT

mRNA sequence

ATGGGGGGAAGAAAATCTTCAAAGTGCTTTTCGATCTGCAGCATTTTGAAGAGCTGCTGCTTCCCAATGGGGGGGAGATCATCAGAGGATGGTGGGTATTGGGACGAAAGTGCAGAGATTAGAAGAAGGATGTGGCCAAGCGATGAAGACAGAGGGCGGTGGGTGGCAGAGCCTGGCATCGACCGCAAGGCTTCTGCTTTCATTGCCAGATTCTATGAAGCTCGAGTTTCTGACCCTCAACGCCAAACTTTTGCTGTT

Coding sequence (CDS)

ATGGGGGGAAGAAAATCTTCAAAGTGCTTTTCGATCTGCAGCATTTTGAAGAGCTGCTGCTTCCCAATGGGGGGGAGATCATCAGAGGATGGTGGGTATTGGGACGAAAGTGCAGAGATTAGAAGAAGGATGTGGCCAAGCGATGAAGACAGAGGGCGGTGGGTGGCAGAGCCTGGCATCGACCGCAAGGCTTCTGCTTTCATTGCCAGATTCTATGAAGCTCGAGTTTCTGACCCTCAACGCCAAACTTTTGCTGTT

Protein sequence

MGGRKSSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDEDRGRWVAEPGIDRKASAFIARFYEARVSDPQRQTFAV

Homology

[Close]

BLAST of MC05g0718 vs. NCBI nr
Match: XP_022138231.1 (uncharacterized protein LOC111009454 [Momordica charantia])

HSP 1 Score: 187 bits (474), Expect = 8.00e-60
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MGGRKSSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDEDRGRWVAEPGI 60
          MGGRKSSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDEDRGRWVAEPGI
Sbjct: 1  MGGRKSSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDEDRGRWVAEPGI 60

Query: 61 DRKASAFIARFYEARVSDPQRQTFAV 86
          DRKASAFIARFYEARVSDPQRQTFAV
Sbjct: 61 DRKASAFIARFYEARVSDPQRQTFAV 86

[Close]

BLAST of MC05g0718 vs. NCBI nr
Match: KAG6582136.1 (hypothetical protein SDJN03_22138, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 149 bits (377), Expect = 5.40e-45
Identity = 73/88 (82.95%), Postives = 76/88 (86.36%), Query Frame = 0


Query: 1  MGGR-KSSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDED-RGRWVAEP 60
          MGGR KS KCFSICSILKSCCFPM G    D  YWDESAEIRRRMWPSD+D RGRWVAEP
Sbjct: 1  MGGRSKSLKCFSICSILKSCCFPMVGGRDNDEAYWDESAEIRRRMWPSDQDSRGRWVAEP 60

Query: 61 GIDRKASAFIARFYEARVSDPQRQTFAV 86
          GIDRKAS FIARFYE+RVSD +RQTFAV
Sbjct: 61 GIDRKASDFIARFYESRVSDSERQTFAV 88

[Close]

BLAST of MC05g0718 vs. NCBI nr
Match: XP_022935735.1 (uncharacterized protein LOC111442555 [Cucurbita moschata] >XP_023540304.1 uncharacterized protein LOC111800720 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144 bits (364), Expect = 4.48e-43
Identity = 72/87 (82.76%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 1  MGGR-KSSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDEDRGRWVAEPG 60
          MGGR KS KCFSICSI KSCCF  GGR   D GYWDES EIRRRMWPSDED  RWVAEPG
Sbjct: 1  MGGRSKSMKCFSICSIFKSCCFSKGGR---DEGYWDESGEIRRRMWPSDEDT-RWVAEPG 60

Query: 61 IDRKASAFIARFYEARVSDPQRQTFAV 86
          IDRKASAFIARFY+ARVSDP+RQT AV
Sbjct: 61 IDRKASAFIARFYDARVSDPERQTLAV 83

[Close]

BLAST of MC05g0718 vs. NCBI nr
Match: KAG7029045.1 (hypothetical protein SDJN02_10228, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143 bits (361), Expect = 1.28e-42
Identity = 71/87 (81.61%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 1  MGGR-KSSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDEDRGRWVAEPG 60
          MGGR KS KCFSICSI KSCCF  GGR   D GYWDES EIRRRMWPSDED  RWVAEPG
Sbjct: 1  MGGRSKSMKCFSICSIFKSCCFSKGGR---DEGYWDESGEIRRRMWPSDEDT-RWVAEPG 60

Query: 61 IDRKASAFIARFYEARVSDPQRQTFAV 86
          IDRKASAFIARFY+ARVSDP+RQT +V
Sbjct: 61 IDRKASAFIARFYDARVSDPERQTLSV 83

[Close]

BLAST of MC05g0718 vs. NCBI nr
Match: KAG6597601.1 (hypothetical protein SDJN03_10781, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 136 bits (342), Expect = 8.30e-40
Identity = 65/79 (82.28%), Postives = 68/79 (86.08%), Query Frame = 0


Query: 8  KCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDEDRGRWVAEPGIDRKASAF 67
          KCFSICSI KSCCF  GGR   D GYWDES EIRRRMWPSDED  RWVAEPGIDRKASAF
Sbjct: 2  KCFSICSIFKSCCFSKGGR---DEGYWDESGEIRRRMWPSDEDT-RWVAEPGIDRKASAF 61

Query: 68 IARFYEARVSDPQRQTFAV 86
          IARFY+ARVSDP+RQT +V
Sbjct: 62 IARFYDARVSDPERQTLSV 76

[Close]

BLAST of MC05g0718 vs. ExPASy TrEMBL
Match: A0A6J1C955 (uncharacterized protein LOC111009454 OS=Momordica charantia OX=3673 GN=LOC111009454 PE=4 SV=1)

HSP 1 Score: 187 bits (474), Expect = 3.87e-60
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MGGRKSSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDEDRGRWVAEPGI 60
          MGGRKSSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDEDRGRWVAEPGI
Sbjct: 1  MGGRKSSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDEDRGRWVAEPGI 60

Query: 61 DRKASAFIARFYEARVSDPQRQTFAV 86
          DRKASAFIARFYEARVSDPQRQTFAV
Sbjct: 61 DRKASAFIARFYEARVSDPQRQTFAV 86

[Close]

BLAST of MC05g0718 vs. ExPASy TrEMBL
Match: A0A6J1FBH6 (uncharacterized protein LOC111442555 OS=Cucurbita moschata OX=3662 GN=LOC111442555 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 2.17e-43
Identity = 72/87 (82.76%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 1  MGGR-KSSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDEDRGRWVAEPG 60
          MGGR KS KCFSICSI KSCCF  GGR   D GYWDES EIRRRMWPSDED  RWVAEPG
Sbjct: 1  MGGRSKSMKCFSICSIFKSCCFSKGGR---DEGYWDESGEIRRRMWPSDEDT-RWVAEPG 60

Query: 61 IDRKASAFIARFYEARVSDPQRQTFAV 86
          IDRKASAFIARFY+ARVSDP+RQT AV
Sbjct: 61 IDRKASAFIARFYDARVSDPERQTLAV 83

[Close]

BLAST of MC05g0718 vs. ExPASy TrEMBL
Match: W9RIP1 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026133 PE=4 SV=1)

HSP 1 Score: 105 bits (261), Expect = 1.13e-27
Identity = 54/84 (64.29%), Postives = 62/84 (73.81%), Query Frame = 0


Query: 3  GRKSSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDEDRGRWVAEPGIDR 62
          G+ +S  FS+CSI  S CF     SS D    +E   IRRR+ PSDEDRG W+AEPGIDR
Sbjct: 5  GKSTSSLFSLCSIF-SACFSS---SSRDDTNSEEGVYIRRRICPSDEDRGGWIAEPGIDR 64

Query: 63 KASAFIARFYEARVSDPQRQTFAV 86
          KASAFIARFYE+RVSDP+RQT AV
Sbjct: 65 KASAFIARFYESRVSDPERQTLAV 84

[Close]

BLAST of MC05g0718 vs. ExPASy TrEMBL
Match: A0A5A7U8R2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00130 PE=4 SV=1)

HSP 1 Score: 103 bits (258), Expect = 2.09e-27
Identity = 52/68 (76.47%), Postives = 60/68 (88.24%), Query Frame = 0


Query: 23 MGGRS--SEDGGYW-DESAEIRRRMWPSDEDRG-RWVAEPGIDRKASAFIARFYEARVSD 82
          MGGR   ++ GGY+ D+S E+RRRMWPSDEDRG RWVAEPGIDRKASAFIARFYEARVSD
Sbjct: 1  MGGRDYGNDYGGYFEDQSGEMRRRMWPSDEDRGSRWVAEPGIDRKASAFIARFYEARVSD 60

Query: 83 PQRQTFAV 86
          P+RQT ++
Sbjct: 61 PERQTLSL 68

[Close]

BLAST of MC05g0718 vs. ExPASy TrEMBL
Match: E5GC50 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 103 bits (258), Expect = 2.09e-27
Identity = 52/68 (76.47%), Postives = 60/68 (88.24%), Query Frame = 0


Query: 23 MGGRS--SEDGGYW-DESAEIRRRMWPSDEDRG-RWVAEPGIDRKASAFIARFYEARVSD 82
          MGGR   ++ GGY+ D+S E+RRRMWPSDEDRG RWVAEPGIDRKASAFIARFYEARVSD
Sbjct: 1  MGGRDYGNDYGGYFEDQSGEMRRRMWPSDEDRGSRWVAEPGIDRKASAFIARFYEARVSD 60

Query: 83 PQRQTFAV 86
          P+RQT ++
Sbjct: 61 PERQTLSL 68

[Close]

BLAST of MC05g0718 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 2.6e-13
Identity = 43/88 (48.86%), Postives = 54/88 (61.36%), Query Frame = 0


Query: 1  MGGRK---SSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDEDRGRWVAE 60
          MGG+    SSK FS+ S  K+          E  G WD+    R+ M  SDED+  WVAE
Sbjct: 1  MGGKNRSHSSKRFSLFSFFKT----RRSHRVEADGSWDDFGYTRKAM-ASDEDKRYWVAE 60

Query: 61 PGIDRKASAFIARFYEARVSDPQRQTFA 86
          PGIDRKASAFIA+F+  RVS+ +RQT +
Sbjct: 61 PGIDRKASAFIAKFHATRVSESERQTLS 83

[Close]

BLAST of MC05g0718 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 4.9e-12
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 23 MGGRSS-----EDGGYWDESAEIRRRMWPSDEDRGRWVAEPGIDRKASAFIARFYEARVS 82
          MG R S     E    WD+     R+ W SDED+  WVAEPGIDRKASAFIA+F+ +RVS
Sbjct: 1  MGARRSSHHRVEADASWDD-VIYTRKAWASDEDKRYWVAEPGIDRKASAFIAKFHASRVS 60

Query: 83 DPQRQT 84
          + +RQT
Sbjct: 61 ESERQT 65

[Close]

BLAST of MC05g0718 vs. TAIR 10
Match: AT1G48325.1 (Expressed protein )

HSP 1 Score: 51.2 bits (121), Expect = 4.8e-07
Identity = 33/87 (37.93%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 1  MGG----RKSSKCFSICSILKSCCFPMGGRSSEDGGYWDES--AEIRRRMWPSDEDRGRW 60
          MGG    RKSS  FS+   L + C       S++   W+E     +R R+  +D+D   W
Sbjct: 3  MGGHGRRRKSSSSFSVVKSLFARC-------SKEKDNWNEERMINVRPRIMTTDDDGCSW 62

Query: 61 -VAEPGIDRKASAFIARFYEARVSDPQ 81
           +AEP IDR+A+AFIA+F+E  + D +
Sbjct: 63 TIAEPCIDRRATAFIAKFHETPIQDTE 82

The following BLAST results are available for this feature:

BLAST of MC05g0718 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g0718 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138231.1	8.00e-60	100.00	uncharacterized protein LOC111009454 [Momordica charantia]	[more]
KAG6582136.1	5.40e-45	82.95	hypothetical protein SDJN03_22138, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022935735.1	4.48e-43	82.76	uncharacterized protein LOC111442555 [Cucurbita moschata] >XP_023540304.1 unchar...	[more]
KAG7029045.1	1.28e-42	81.61	hypothetical protein SDJN02_10228, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6597601.1	8.30e-40	82.28	hypothetical protein SDJN03_10781, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC05g0718 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C955	3.87e-60	100.00	uncharacterized protein LOC111009454 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1FBH6	2.17e-43	82.76	uncharacterized protein LOC111442555 OS=Cucurbita moschata OX=3662 GN=LOC1114425...	[more]
W9RIP1	1.13e-27	64.29	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026133 PE=4 SV=1	[more]
A0A5A7U8R2	2.09e-27	76.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
E5GC50	2.09e-27	76.47	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of MC05g0718 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05858.1	2.6e-13	48.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G26620.1	4.9e-12	54.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G48325.1	4.8e-07	37.93	Expressed protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33511:SF23	SUBFAMILY NOT NAMED	coord: 4..86
None	No IPR available	PANTHER	PTHR33511	OS06G0632400 PROTEIN	coord: 4..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0718.1	MC05g0718.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006897	endocytosis