MC05g0626 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0626
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	TOG domain-containing protein
Location	MC05: 4809259 .. 4809500 (-)
RNA-Seq Expression	MC05g0626
Synteny	MC05g0626

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCAAATTCTTCAGGGTCTGGCAGAAATGAACCAATATGGGATTGTTCCATTGCTCCAAATGGGTGCAGATTTGTTAAACGATAGGCTCCTGAGGCAAGGGAAGCTGCTCGGAGCATTGTGATGGGAATGTTCAAGGCATACACAAAGAACGAGGACGAGAAACAGGAGGCCTGGCACAGCTTTTGCCGAGCTAATCTGTCGCCGATTCATGCGCAGTCTCTGCTCAAAGTTACCTCCTCT

mRNA sequence

TGCCAAATTCTTCAGGGTCTGGCAGAAATGAACCAATATGGGATTGTTCCATTGCTCCAAATGGGTGCAGATTTGTTAAACGATAGGCCTGAGGCAAGGGAAGCTGCTCGGAGCATTGTGATGGGAATGTTCAAGGCATACACAAAGAACGAGGACGAGAAACAGGAGGCCTGGCACAGCTTTTGCCGAGCTAATCTGTCGCCGATTCATGCGCAGTCTCTGCTCAAAGTTACCTCCTCT

Coding sequence (CDS)

TGCCAAATTCTTCAGGGTCTGGCAGAAATGAACCAATATGGGATTGTTCCATTGCTCCAAATGGGTGCAGATTTGTTAAACGATAGGCCTGAGGCAAGGGAAGCTGCTCGGAGCATTGTGATGGGAATGTTCAAGGCATACACAAAGAACGAGGACGAGAAACAGGAGGCCTGGCACAGCTTTTGCCGAGCTAATCTGTCGCCGATTCATGCGCAGTCTCTGCTCAAAGTTACCTCCTCT

Protein sequence

CQILQGLAEMNQYGIVPLLQMGADLLNDRPEAREAARSIVMGMFKAYTKNEDEKQEAWHSFCRANLSPIHAQSLLKVTSS

Homology

[Close]

BLAST of MC05g0626 vs. NCBI nr
Match: XP_022137956.1 (uncharacterized protein LOC111009242 [Momordica charantia])

HSP 1 Score: 137 bits (346), Expect = 8.02e-38
Identity = 69/81 (85.19%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 1   CQILQGLAEMNQYGIVPLLQMGADLLNDR-PEAREAARSIVMGMFKAYTKNEDEKQEAWH 60
           C    GLAEMNQYGIVPLLQM ADLLNDR PEAREAARSIVMGMFKA+T+NE+EKQEAW 
Sbjct: 216 CVSKMGLAEMNQYGIVPLLQMAADLLNDRLPEAREAARSIVMGMFKAFTENEEEKQEAWQ 275

Query: 61  SFCRANLSPIHAQSLLKVTSS 80
           SFC+ANLSPIHAQSLLKVT+S
Sbjct: 276 SFCQANLSPIHAQSLLKVTTS 296

[Close]

BLAST of MC05g0626 vs. NCBI nr
Match: XP_023540087.1 (TOG array regulator of axonemal microtubules protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131 bits (330), Expect = 1.94e-35
Identity = 66/81 (81.48%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 1   CQILQGLAEMNQYGIVPLLQMGADLLNDR-PEAREAARSIVMGMFKAYTKNEDEKQEAWH 60
           C  + GL EMNQYGIVPLLQM ADLLNDR PEAREAARSIVMG+FKA+T NE+EKQEAW 
Sbjct: 216 CVSMMGLEEMNQYGIVPLLQMAADLLNDRLPEAREAARSIVMGVFKAFTANEEEKQEAWQ 275

Query: 61  SFCRANLSPIHAQSLLKVTSS 80
           SFC+ NLSPI AQSLLKVTSS
Sbjct: 276 SFCQTNLSPIQAQSLLKVTSS 296

[Close]

BLAST of MC05g0626 vs. NCBI nr
Match: XP_011651061.1 (uncharacterized protein LOC101204184 [Cucumis sativus] >KGN57110.1 hypothetical protein Csa_011499 [Cucumis sativus])

HSP 1 Score: 130 bits (327), Expect = 4.97e-35
Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 1   CQILQGLAEMNQYGIVPLLQMGADLLNDR-PEAREAARSIVMGMFKAYTKNEDEKQEAWH 60
           C    GL EMNQYG VPLLQM +DLLNDR PEAREAARSIVMGMFKAYT+NE++KQEAW 
Sbjct: 211 CVSKMGLEEMNQYGFVPLLQMASDLLNDRLPEAREAARSIVMGMFKAYTENEEDKQEAWQ 270

Query: 61  SFCRANLSPIHAQSLLKVTSS 80
           SFC+ANLSPIH+QSLLKV +S
Sbjct: 271 SFCQANLSPIHSQSLLKVVTS 291

[Close]

BLAST of MC05g0626 vs. NCBI nr
Match: XP_008438886.1 (PREDICTED: uncharacterized protein LOC103483845 [Cucumis melo] >KAA0049497.1 protein FAM179B [Cucumis melo var. makuwa] >TYK16177.1 protein FAM179B [Cucumis melo var. makuwa])

HSP 1 Score: 130 bits (327), Expect = 4.97e-35
Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 1   CQILQGLAEMNQYGIVPLLQMGADLLNDR-PEAREAARSIVMGMFKAYTKNEDEKQEAWH 60
           C    GL EMNQYG VPLLQM +DLLNDR PEAREAARSIVMGMFKAYT+NE++KQEAW 
Sbjct: 211 CVSKMGLEEMNQYGFVPLLQMASDLLNDRLPEAREAARSIVMGMFKAYTENEEDKQEAWQ 270

Query: 61  SFCRANLSPIHAQSLLKVTSS 80
           SFC+ANLSPIH+QSLLKV +S
Sbjct: 271 SFCQANLSPIHSQSLLKVVTS 291

[Close]

BLAST of MC05g0626 vs. NCBI nr
Match: KAG7028980.1 (TOG array regulator of axonemal microtubules protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 130 bits (326), Expect = 7.67e-35
Identity = 66/81 (81.48%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 1   CQILQGLAEMNQYGIVPLLQMGADLLNDR-PEAREAARSIVMGMFKAYTKNEDEKQEAWH 60
           C    GL EMNQYGIVPLLQM ADLLNDR PEAREAARSIVMG+FKA+T NE+EKQEAW 
Sbjct: 216 CVSKMGLEEMNQYGIVPLLQMAADLLNDRLPEAREAARSIVMGVFKAFTANEEEKQEAWQ 275

Query: 61  SFCRANLSPIHAQSLLKVTSS 80
           SFC+ NLSPI AQSLLKVTSS
Sbjct: 276 SFCQTNLSPIQAQSLLKVTSS 296

[Close]

BLAST of MC05g0626 vs. ExPASy TrEMBL
Match: A0A6J1C894 (uncharacterized protein LOC111009242 OS=Momordica charantia OX=3673 GN=LOC111009242 PE=4 SV=1)

HSP 1 Score: 137 bits (346), Expect = 3.88e-38
Identity = 69/81 (85.19%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 1   CQILQGLAEMNQYGIVPLLQMGADLLNDR-PEAREAARSIVMGMFKAYTKNEDEKQEAWH 60
           C    GLAEMNQYGIVPLLQM ADLLNDR PEAREAARSIVMGMFKA+T+NE+EKQEAW 
Sbjct: 216 CVSKMGLAEMNQYGIVPLLQMAADLLNDRLPEAREAARSIVMGMFKAFTENEEEKQEAWQ 275

Query: 61  SFCRANLSPIHAQSLLKVTSS 80
           SFC+ANLSPIHAQSLLKVT+S
Sbjct: 276 SFCQANLSPIHAQSLLKVTTS 296

[Close]

BLAST of MC05g0626 vs. ExPASy TrEMBL
Match: A0A5D3CW98 (Protein FAM179B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001050 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 2.41e-35
Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 1   CQILQGLAEMNQYGIVPLLQMGADLLNDR-PEAREAARSIVMGMFKAYTKNEDEKQEAWH 60
           C    GL EMNQYG VPLLQM +DLLNDR PEAREAARSIVMGMFKAYT+NE++KQEAW 
Sbjct: 211 CVSKMGLEEMNQYGFVPLLQMASDLLNDRLPEAREAARSIVMGMFKAYTENEEDKQEAWQ 270

Query: 61  SFCRANLSPIHAQSLLKVTSS 80
           SFC+ANLSPIH+QSLLKV +S
Sbjct: 271 SFCQANLSPIHSQSLLKVVTS 291

[Close]

BLAST of MC05g0626 vs. ExPASy TrEMBL
Match: A0A0A0L588 (TOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G154330 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 2.41e-35
Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 1   CQILQGLAEMNQYGIVPLLQMGADLLNDR-PEAREAARSIVMGMFKAYTKNEDEKQEAWH 60
           C    GL EMNQYG VPLLQM +DLLNDR PEAREAARSIVMGMFKAYT+NE++KQEAW 
Sbjct: 211 CVSKMGLEEMNQYGFVPLLQMASDLLNDRLPEAREAARSIVMGMFKAYTENEEDKQEAWQ 270

Query: 61  SFCRANLSPIHAQSLLKVTSS 80
           SFC+ANLSPIH+QSLLKV +S
Sbjct: 271 SFCQANLSPIHSQSLLKVVTS 291

[Close]

BLAST of MC05g0626 vs. ExPASy TrEMBL
Match: A0A1S3AX30 (uncharacterized protein LOC103483845 OS=Cucumis melo OX=3656 GN=LOC103483845 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 2.41e-35
Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 1   CQILQGLAEMNQYGIVPLLQMGADLLNDR-PEAREAARSIVMGMFKAYTKNEDEKQEAWH 60
           C    GL EMNQYG VPLLQM +DLLNDR PEAREAARSIVMGMFKAYT+NE++KQEAW 
Sbjct: 211 CVSKMGLEEMNQYGFVPLLQMASDLLNDRLPEAREAARSIVMGMFKAYTENEEDKQEAWQ 270

Query: 61  SFCRANLSPIHAQSLLKVTSS 80
           SFC+ANLSPIH+QSLLKV +S
Sbjct: 271 SFCQANLSPIHSQSLLKVVTS 291

[Close]

BLAST of MC05g0626 vs. ExPASy TrEMBL
Match: A0A6J1GV13 (uncharacterized protein LOC111457759 OS=Cucurbita moschata OX=3662 GN=LOC111457759 PE=4 SV=1)

HSP 1 Score: 130 bits (326), Expect = 3.71e-35
Identity = 66/81 (81.48%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 1   CQILQGLAEMNQYGIVPLLQMGADLLNDR-PEAREAARSIVMGMFKAYTKNEDEKQEAWH 60
           C    GL EMNQYGIVPLLQM ADLLNDR PEAREAARSIVMG+FKA+T NE+EKQEAW 
Sbjct: 216 CVSKMGLEEMNQYGIVPLLQMAADLLNDRLPEAREAARSIVMGVFKAFTANEEEKQEAWQ 275

Query: 61  SFCRANLSPIHAQSLLKVTSS 80
           SFC+ NLSPI AQSLLKVTSS
Sbjct: 276 SFCQTNLSPIQAQSLLKVTSS 296

[Close]

BLAST of MC05g0626 vs. TAIR 10
Match: AT4G15830.1 (ARM repeat superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-14
Identity = 37/78 (47.44%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 9   EMNQYGIVPLLQMGADLLNDR-PEAREAARSIVMGMFKAYTKNEDE-----KQEAWHSFC 68
           EM ++G++ L QM AD L+D+ PEAREAARS+V  +F+ +T NE+E     KQEAW  FC
Sbjct: 218 EMEEFGMILLAQMAADQLSDKLPEAREAARSMVNSLFEKFTWNEEEDEEGSKQEAWKKFC 277

Query: 69  RANLSPIHAQSLLKVTSS 81
             N++ ++AQ+++K+ +S
Sbjct: 278 EKNVTGLNAQAMIKIVAS 295

[Close]

BLAST of MC05g0626 vs. TAIR 10
Match: AT3G01450.1 (ARM repeat superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 9.5e-10
Identity = 31/82 (37.80%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 6   GLAEMNQYGIVPLLQMGADLLNDR-PEAREAARSIVMGMFKAY--TKNEDEKQE-----A 65
           G+  + +YGI  L+Q  +  L+D+ PE+REAAR++++ +   Y  T N + K+E      
Sbjct: 232 GIEGIREYGIEKLVQAASSQLSDQLPESREAARAVLLELQTVYKKTTNVEPKEEHPEPVT 291

Query: 66  WHSFCRANLSPIHAQSLLKVTS 80
           W  FC++NLSP+ AQ++++VT+
Sbjct: 292 WQIFCQSNLSPLSAQAVIRVTN 313

[Close]

BLAST of MC05g0626 vs. TAIR 10
Match: AT5G14790.1 (ARM repeat superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 1.5e-07
Identity = 30/91 (32.97%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 6   GLAEMNQYGIVPLLQMGADLLNDR-PEAREAARSIVMGMFKAYTK---------NEDEKQ 65
           G+  + +YGI  L+Q  A  L+D+ PE+REAAR++++ +   Y K         +  E+Q
Sbjct: 235 GVEGIKEYGIDKLVQAAASQLSDQLPESREAARTVLLELQSVYEKAHPLINPETSSPEEQ 294

Query: 66  E-------AWHSFCRANLSPIHAQSLLKVTS 80
           +        W +FC++ LS + AQ++L+VT+
Sbjct: 295 QIPEVEPITWETFCKSKLSALSAQAVLRVTN 325

The following BLAST results are available for this feature:

BLAST of MC05g0626 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g0626 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137956.1	8.02e-38	85.19	uncharacterized protein LOC111009242 [Momordica charantia]	[more]
XP_023540087.1	1.94e-35	81.48	TOG array regulator of axonemal microtubules protein 2 [Cucurbita pepo subsp. pe...	[more]
XP_011651061.1	4.97e-35	79.01	uncharacterized protein LOC101204184 [Cucumis sativus] >KGN57110.1 hypothetical ...	[more]
XP_008438886.1	4.97e-35	79.01	PREDICTED: uncharacterized protein LOC103483845 [Cucumis melo] >KAA0049497.1 pro...	[more]
KAG7028980.1	7.67e-35	81.48	TOG array regulator of axonemal microtubules protein 1 [Cucurbita argyrosperma s...	[more]

BLAST of MC05g0626 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C894	3.88e-38	85.19	uncharacterized protein LOC111009242 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A5D3CW98	2.41e-35	79.01	Protein FAM179B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G0010...	[more]
A0A0A0L588	2.41e-35	79.01	TOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G154330 PE=4 SV...	[more]
A0A1S3AX30	2.41e-35	79.01	uncharacterized protein LOC103483845 OS=Cucumis melo OX=3656 GN=LOC103483845 PE=...	[more]
A0A6J1GV13	3.71e-35	81.48	uncharacterized protein LOC111457759 OS=Cucurbita moschata OX=3662 GN=LOC1114577...	[more]

BLAST of MC05g0626 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15830.1	1.3e-14	47.44	ARM repeat superfamily protein	[more]
AT3G01450.1	9.5e-10	37.80	ARM repeat superfamily protein	[more]
AT5G14790.1	1.5e-07	32.97	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21567:SF65	ARM REPEAT SUPERFAMILY PROTEIN	coord: 8..78
None	No IPR available	PANTHER	PTHR21567	CLASP	coord: 8..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0626.1	MC05g0626.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000226	microtubule cytoskeleton organization
cellular_component	GO:0005881	cytoplasmic microtubule
molecular_function	GO:0008017	microtubule binding