MC05g0548 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0548
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	outer envelope membrane protein 7
Location	MC05: 4181061 .. 4181246 (-)
RNA-Seq Expression	MC05g0548
Synteny	MC05g0548

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAAGCGGCGAAGTTGAATGCGGCCAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATATCTCAGCCTGCAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAGAGCTCTCTCCAACATCCCCATTCGGAGCCCTCAACAATTCCCGAAGACGCCATTTCAAAGCGCCATGAT

mRNA sequence

ATGAAGGAAGCGGCGAAGTTGAATGCGGCCAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATATCTCAGCCTGCAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAGAGCTCTCTCCAACATCCCCATTCGGAGCCCTCAACAATTCCCGAAGACGCCATTTCAAAGCGCCATGAT

Coding sequence (CDS)

ATGAAGGAAGCGGCGAAGTTGAATGCGGCCAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATATCTCAGCCTGCAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAGAGCTCTCTCCAACATCCCCATTCGGAGCCCTCAACAATTCCCGAAGACGCCATTTCAAAGCGCCATGAT

Protein sequence

MKEAAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPHSEPSTIPEDAISKRHD

Homology

[Close]

BLAST of MC05g0548 vs. NCBI nr
Match: KAG7018683.1 (hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105 bits (261), Expect = 1.19e-27
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 1  MKEAAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPHSEPSTIPEDAISKR 60
          MKEAAKLNA RSG+VVIGALAFGYLSL LVFKPYLEKAQSSLQHP SEPSTIP+DAIS R
Sbjct: 34 MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQSSLQHPDSEPSTIPKDAISNR 93

Query: 61 HD 62
           D
Sbjct: 94 DD 95

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BLAST of MC05g0548 vs. NCBI nr
Match: KAG6582279.1 (hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 104 bits (259), Expect = 1.26e-27
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 1  MKEAAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPHSEPSTIPEDAISKR 60
          MKEAAKLNA RSG+VVIGALAFGYLSL LVFKPYLEKAQ SLQHP+SEPSTIP+DAIS R
Sbjct: 11 MKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQGSLQHPNSEPSTIPKDAISNR 70

Query: 61 HD 62
           D
Sbjct: 71 DD 72

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BLAST of MC05g0548 vs. NCBI nr
Match: KGN57013.1 (hypothetical protein Csa_010432 [Cucumis sativus])

HSP 1 Score: 103 bits (257), Expect = 3.36e-27
Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = 0


Query: 1  MKEAAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPHSEPSTIPEDAIS 58
          MKE AKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHP  EPSTIP+DAIS
Sbjct: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAIS 58

[Close]

BLAST of MC05g0548 vs. NCBI nr
Match: KAA0049387.1 (hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa] >TYK17172.1 hypothetical protein E5676_scaffold434G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 1.16e-22
Identity = 49/58 (84.48%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 1  MKEAAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPHSEPSTIPEDAIS 58
          MKE AKLNAARSGLVVIGALAFGYLSLQ+ FKPYLEKAQS LQHP  EPSTI +DA+S
Sbjct: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQSYLQHPEPEPSTILKDAVS 58

[Close]

BLAST of MC05g0548 vs. NCBI nr
Match: XP_042939644.1 (outer envelope membrane protein 7 [Carya illinoinensis] >KAG2727424.1 hypothetical protein I3760_01G157400 [Carya illinoinensis] >KAG6668308.1 hypothetical protein CIPAW_01G161200 [Carya illinoinensis] >KAG6732085.1 hypothetical protein I3842_01G159800 [Carya illinoinensis] >KAG7996299.1 hypothetical protein I3843_01G152500 [Carya illinoinensis])

HSP 1 Score: 67.0 bits (162), Expect = 4.90e-13
Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 1  MKEAAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQH--PHSEPS 50
          MK+ AK+NA RSG+VV+GALAFGYL+LQL FKP+LEKAQ +L+   P S PS
Sbjct: 1  MKQTAKMNAIRSGIVVVGALAFGYLTLQLGFKPFLEKAQETLEKSDPPSPPS 52

[Close]

BLAST of MC05g0548 vs. ExPASy TrEMBL
Match: A0A0A0L5N1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1)

HSP 1 Score: 103 bits (257), Expect = 1.63e-27
Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = 0


Query: 1  MKEAAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPHSEPSTIPEDAIS 58
          MKE AKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHP  EPSTIP+DAIS
Sbjct: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAIS 58

[Close]

BLAST of MC05g0548 vs. ExPASy TrEMBL
Match: A0A5A7U4W2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00160 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.63e-23
Identity = 49/58 (84.48%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 1  MKEAAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPHSEPSTIPEDAIS 58
          MKE AKLNAARSGLVVIGALAFGYLSLQ+ FKPYLEKAQS LQHP  EPSTI +DA+S
Sbjct: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQSYLQHPEPEPSTILKDAVS 58

[Close]

BLAST of MC05g0548 vs. ExPASy TrEMBL
Match: W9R337 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.09e-13
Identity = 31/51 (60.78%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 1  MKEAAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPHSEPST 51
          M++  K+NA RSG+VV+GA+AFGYL+L L FKP+LEKAQ S++H  S+PS+
Sbjct: 1  MRDRRKMNAMRSGVVVVGAMAFGYLTLYLGFKPFLEKAQLSVEHSQSQPSS 51

[Close]

BLAST of MC05g0548 vs. ExPASy TrEMBL
Match: A0A4D9A3A6 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033849 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.08e-12
Identity = 36/57 (63.16%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 1  MKEAAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPHSEPSTIPEDAI 57
          M+  AK NA RSGLVVIGALAFGYL+L L FKPYLEKAQ   QH  +  S+ P D  
Sbjct: 1  MRGTAKANAMRSGLVVIGALAFGYLTLHLGFKPYLEKAQLEQQHQSAAASSQPVDTF 57

[Close]

BLAST of MC05g0548 vs. ExPASy TrEMBL
Match: A0A1U7Y866 (uncharacterized protein LOC104242143 OS=Nicotiana sylvestris OX=4096 GN=LOC104242143 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 9.61e-12
Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 0


Query: 1  MKEAAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPHSEPS 50
          M++  K+ A RSGLVVIGA+AFGYL+LQL+FKP+LEK QS     HSE S
Sbjct: 1  MRDTTKMKALRSGLVVIGAVAFGYLNLQLMFKPFLEKTQSQQALLHSESS 50

[Close]

BLAST of MC05g0548 vs. TAIR 10
Match: AT5G19151.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 4.5e-07
Identity = 29/55 (52.73%), Postives = 36/55 (65.45%), Query Frame = 0


Query: 1  MKEAAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKA-------QSSLQHPHSE 49
          MK     NA RS +VV+G+LAFGYLSL+L +KP+LEKA       QSS QH   +
Sbjct: 1  MKRTVMDNAIRSSVVVLGSLAFGYLSLELGYKPFLEKAEQYERSLQSSQQHQQQD 55

[Close]

BLAST of MC05g0548 vs. TAIR 10
Match: AT3G52420.1 (outer envelope membrane protein 7 )

HSP 1 Score: 41.6 bits (96), Expect = 2.7e-04
Identity = 19/50 (38.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 6  KLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPHSEPSTIPED 56
          K + A+   VV+ A+A G+L++++ FKP+L+K +SS+    S+P+  P+D
Sbjct: 3  KTSGAKQATVVVAAMALGWLAIEIAFKPFLDKFRSSID--KSDPTKDPDD 50

The following BLAST results are available for this feature:

BLAST of MC05g0548 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g0548 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018683.1	1.19e-27	88.71	hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6582279.1	1.26e-27	87.10	hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KGN57013.1	3.36e-27	93.10	hypothetical protein Csa_010432 [Cucumis sativus]	[more]
KAA0049387.1	1.16e-22	84.48	hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa] >TYK171...	[more]
XP_042939644.1	4.90e-13	67.31	outer envelope membrane protein 7 [Carya illinoinensis] >KAG2727424.1 hypothetic...	[more]

BLAST of MC05g0548 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5N1	1.63e-27	93.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1	[more]
A0A5A7U4W2	5.63e-23	84.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
W9R337	3.09e-13	60.78	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1	[more]
A0A4D9A3A6	1.08e-12	63.16	Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033849 PE=4 SV=1	[more]
A0A1U7Y866	9.61e-12	64.00	uncharacterized protein LOC104242143 OS=Nicotiana sylvestris OX=4096 GN=LOC10424...	[more]

BLAST of MC05g0548 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19151.1	4.5e-07	52.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G52420.1	2.7e-04	38.00	outer envelope membrane protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..62
None	No IPR available	PANTHER	PTHR33982:SF4	OS05G0532800 PROTEIN	coord: 1..53
IPR038944	Outer envelope membrane protein 7-like	PANTHER	PTHR33982	OUTER ENVELOPE MEMBRANE PROTEIN 7-RELATED	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0548.1	MC05g0548.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane