MC05g0528 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0528
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC05: 3985560 .. 3985995 (-)
RNA-Seq Expression	MC05g0528
Synteny	MC05g0528

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTGAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCCAAAAAACGTAAGTTACTTCCCCGTTCTCGAACTCGATTTCGCACTCTTTCTCTGTCTCCTCTCTGTTTTTTGAATGTAGCCTGCATTTGCTTCATTTTTCCCTGTGCAATGCCACCATTTTCAAAACTTGAACAACCCATTTTCCCTCTCTTTCTGGGTTTTCACTGGCAAATCATGCAGAAAAGAATCTCTTCAACACCATTTGAATTTGAATTTGAAGTTCAAGTTTTCTTTTTTCTTTTTGGGGTTATTTAATGCAGGAAGAGGGATATATATTCTGTATGAGGATGTCAAATCCTGCCCCTGTGAAGATGTCCATGTGCTCTGGTCAATTCTAGTGGAATCACATGCTCCATTGCCACCAAAACAA

mRNA sequence

ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTGAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCCAAAAAACGAAGAGGGATATATATTCTGTATGAGGATGTCAAATCCTGCCCCTGTGAAGATGTCCATGTGCTCTGGTCAATTCTAGTGGAATCACATGCTCCATTGCCACCAAAACAA

Coding sequence (CDS)

ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTGAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCCAAAAAACGAAGAGGGATATATATTCTGTATGAGGATGTCAAATCCTGCCCCTGTGAAGATGTCCATGTGCTCTGGTCAATTCTAGTGGAATCACATGCTCCATTGCCACCAAAACAA

Protein sequence

MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHAPLPPKQ

Homology

[Close]

BLAST of MC05g0528 vs. NCBI nr
Match: KGN56989.1 (hypothetical protein Csa_010650 [Cucumis sativus])

HSP 1 Score: 133 bits (335), Expect = 2.25e-39
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHAPLPPK 60
          MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESH PLPPK
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60

[Close]

BLAST of MC05g0528 vs. NCBI nr
Match: PHT38775.1 (hypothetical protein CQW23_22348 [Capsicum baccatum] >PHT85969.1 hypothetical protein T459_08075 [Capsicum annuum])

HSP 1 Score: 121 bits (304), Expect = 1.25e-34
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH  PLPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHPLPP 60

[Close]

BLAST of MC05g0528 vs. NCBI nr
Match: KAG6597448.1 (hypothetical protein SDJN03_10628, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 121 bits (304), Expect = 1.39e-34
Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHAP 56
          MGWLQSLFSPLKKLWFRLHSSP+KRRGIYILYEDVKSCPCEDVHVLWSILVESH P
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHTP 56

[Close]

BLAST of MC05g0528 vs. NCBI nr
Match: KAG5587814.1 (hypothetical protein H5410_048248 [Solanum commersonii] >TMW85068.1 hypothetical protein EJD97_023849 [Solanum chilense])

HSP 1 Score: 118 bits (296), Expect = 2.08e-33
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH   LPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHSLPP 60

[Close]

BLAST of MC05g0528 vs. NCBI nr
Match: PHU21929.1 (hypothetical protein BC332_07036, partial [Capsicum chinense])

HSP 1 Score: 116 bits (291), Expect = 1.09e-32
Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESH 54
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESH 54

[Close]

BLAST of MC05g0528 vs. ExPASy TrEMBL
Match: A0A0A0L7K5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G147230 PE=4 SV=1)

HSP 1 Score: 133 bits (335), Expect = 1.09e-39
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHAPLPPK 60
          MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESH PLPPK
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60

[Close]

BLAST of MC05g0528 vs. ExPASy TrEMBL
Match: A0A2G2W0L8 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_22348 PE=4 SV=1)

HSP 1 Score: 121 bits (304), Expect = 6.05e-35
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH  PLPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHPLPP 60

[Close]

BLAST of MC05g0528 vs. ExPASy TrEMBL
Match: A0A2G2ZVG2 (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_08075 PE=4 SV=1)

HSP 1 Score: 121 bits (304), Expect = 6.05e-35
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH  PLPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHPLPP 60

[Close]

BLAST of MC05g0528 vs. ExPASy TrEMBL
Match: A0A0V0GKY9 (Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 118 bits (296), Expect = 1.01e-33
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH   LPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHSLPP 60

[Close]

BLAST of MC05g0528 vs. ExPASy TrEMBL
Match: M1CYA3 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 118 bits (296), Expect = 1.01e-33
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH   LPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHSLPP 60

The following BLAST results are available for this feature:

BLAST of MC05g0528 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g0528 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56989.1	2.25e-39	98.36	hypothetical protein Csa_010650 [Cucumis sativus]	[more]
PHT38775.1	1.25e-34	90.32	hypothetical protein CQW23_22348 [Capsicum baccatum] >PHT85969.1 hypothetical pr...	[more]
KAG6597448.1	1.39e-34	96.43	hypothetical protein SDJN03_10628, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG5587814.1	2.08e-33	88.71	hypothetical protein H5410_048248 [Solanum commersonii] >TMW85068.1 hypothetical...	[more]
PHU21929.1	1.09e-32	96.30	hypothetical protein BC332_07036, partial [Capsicum chinense]	[more]

BLAST of MC05g0528 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7K5	1.09e-39	98.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G147230 PE=4 SV=1	[more]
A0A2G2W0L8	6.05e-35	90.32	Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_22348 PE=4 SV=1	[more]
A0A2G2ZVG2	6.05e-35	90.32	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_08075 PE=4 SV=1	[more]
A0A0V0GKY9	1.01e-33	88.71	Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1	[more]
M1CYA3	1.01e-33	88.71	Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1	[more]

BLAST of MC05g0528 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33181	OS01G0778500 PROTEIN	coord: 1..59
None	No IPR available	PANTHER	PTHR33181:SF7	OS07G0572400 PROTEIN	coord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0528.1	MC05g0528.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001172	transcription, RNA-templated
molecular_function	GO:0003968	RNA-directed 5'-3' RNA polymerase activity