MC05g0503 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0503
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Epidermal patterning factor-like protein
Location	MC05: 3763686 .. 3763835 (+)
RNA-Seq Expression	MC05g0503
Synteny	MC05g0503

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGATCGTGTCCGCCCACGTGCAGATCCAAGTGCGGCCGGTGCTGGCCCTGCGACCCGGTCCACGTCCCAATTCAACCCGGTCTAAGCTTTCCATTGGAGTATTACCCAGAAGCTTGGCGATGTAAGTGCGGGAACAACCTCTTCATGCCT

mRNA sequence

GGATCGTGTCCGCCCACGTGCAGATCCAAGTGCGGCCGGTGCTGGCCCTGCGACCCGGTCCACGTCCCAATTCAACCCGGTCTAAGCTTTCCATTGGAGTATTACCCAGAAGCTTGGCGATGTAAGTGCGGGAACAACCTCTTCATGCCT

Coding sequence (CDS)

GGATCGTGTCCGCCCACGTGCAGATCCAAGTGCGGCCGGTGCTGGCCCTGCGACCCGGTCCACGTCCCAATTCAACCCGGTCTAAGCTTTCCATTGGAGTATTACCCAGAAGCTTGGCGATGTAAGTGCGGGAACAACCTCTTCATGCCT

Protein sequence

GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

Homology

[Close]

BLAST of MC05g0503 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.2e-23
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0


Query: 1   GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 51
           GS PPTCRSKCG+C PC PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of MC05g0503 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.6e-20
Identity = 40/50 (80.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 1   GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 51
           GS PP CR KCG+C PC  VHVPIQPGL  PLEYYPEAWRCKCGN LFMP
Sbjct: 58  GSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of MC05g0503 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-18
Identity = 36/50 (72.00%), Postives = 38/50 (76.00%), Query Frame = 0


Query: 1   GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 51
           GS PP C SKCGRC PC PVHVP+ PG     EYYPEAWRCKCGN L+MP
Sbjct: 107 GSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of MC05g0503 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.6e-07
Identity = 20/49 (40.82%), Postives = 29/49 (59.18%), Query Frame = 0


Query: 2   SCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 51
           S PP C++KC  C PC P  + + P  + P +YYP+ W C C N ++ P
Sbjct: 468 SSPPNCKNKCKGCQPCKPKLIIVHP--NKPQDYYPQKWVCSCHNKIYNP 514

[Close]

BLAST of MC05g0503 vs. ExPASy Swiss-Prot
Match: Q9FY19 (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.0e-07
Identity = 20/49 (40.82%), Postives = 29/49 (59.18%), Query Frame = 0


Query: 2   SCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 51
           S PP C++KC  C PC P  + + P  + P +YYP+ W C C N ++ P
Sbjct: 461 SSPPNCKNKCKGCQPCKPKLIIVHP--NQPEDYYPQRWVCSCHNKIYNP 507

[Close]

BLAST of MC05g0503 vs. NCBI nr
Match: XP_030508149.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 [Cannabis sativa] >KAF4352870.1 hypothetical protein F8388_002060 [Cannabis sativa] >KAF4389225.1 hypothetical protein G4B88_003038 [Cannabis sativa])

HSP 1 Score: 115 bits (289), Expect = 1.10e-31
Identity = 47/50 (94.00%), Postives = 47/50 (94.00%), Query Frame = 0


Query: 1   GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 50
           GS PPTCRSKCGRC PC PVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
Sbjct: 82  GSSPPTCRSKCGRCSPCKPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 131

[Close]

BLAST of MC05g0503 vs. NCBI nr
Match: KAG6597420.1 (EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 114 bits (286), Expect = 1.13e-31
Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0


Query: 1  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 50
          GS PPTCRS+CGRCWPC PVHVPIQPG+S PLEYYPEAWRCKCGN LFMP
Sbjct: 47 GSSPPTCRSRCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP 96

[Close]

BLAST of MC05g0503 vs. NCBI nr
Match: XP_038905188.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 [Benincasa hispida])

HSP 1 Score: 114 bits (286), Expect = 1.17e-31
Identity = 45/50 (90.00%), Postives = 47/50 (94.00%), Query Frame = 0


Query: 1  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 50
          GSCPPTCR+KCGRC PC+PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Sbjct: 48 GSCPPTCRAKCGRCRPCEPVHVPIQPGLSVPLEYYPEAWRCKCGNKLFMP 97

[Close]

BLAST of MC05g0503 vs. NCBI nr
Match: XP_021606945.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 [Manihot esculenta] >OAY55695.1 hypothetical protein MANES_03G173400v8 [Manihot esculenta])

HSP 1 Score: 112 bits (281), Expect = 1.05e-30
Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 0


Query: 1   GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 50
           GS PPTCRSKCGRC+PC PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Sbjct: 63  GSSPPTCRSKCGRCFPCQPVHVPIQPGLSVPLEYYPEAWRCKCGNKLFMP 112

[Close]

BLAST of MC05g0503 vs. NCBI nr
Match: 5XKN_E (Crystal structure of plant receptor ERL2 in complexe with EPFL4 [Arabidopsis thaliana] >5XKN_F Crystal structure of plant receptor ERL2 in complexe with EPFL4 [Arabidopsis thaliana])

HSP 1 Score: 110 bits (275), Expect = 1.58e-30
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0


Query: 1  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 50
          GS PPTCRSKCG+C PC PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Sbjct: 2  GSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 51

[Close]

BLAST of MC05g0503 vs. ExPASy TrEMBL
Match: A0A7J6E4U4 (Epidermal patterning factor-like protein OS=Cannabis sativa OX=3483 GN=F8388_002060 PE=3 SV=1)

HSP 1 Score: 115 bits (289), Expect = 5.33e-32
Identity = 47/50 (94.00%), Postives = 47/50 (94.00%), Query Frame = 0


Query: 1   GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 50
           GS PPTCRSKCGRC PC PVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
Sbjct: 82  GSSPPTCRSKCGRCSPCKPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 131

[Close]

BLAST of MC05g0503 vs. ExPASy TrEMBL
Match: A0A2C9W8D5 (Epidermal patterning factor-like protein OS=Manihot esculenta OX=3983 GN=MANES_03G173400 PE=3 SV=1)

HSP 1 Score: 112 bits (281), Expect = 5.06e-31
Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 0


Query: 1   GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 50
           GS PPTCRSKCGRC+PC PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Sbjct: 63  GSSPPTCRSKCGRCFPCQPVHVPIQPGLSVPLEYYPEAWRCKCGNKLFMP 112

[Close]

BLAST of MC05g0503 vs. ExPASy TrEMBL
Match: A0A3S3P4G4 (Epidermal patterning factor-like protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02237700 PE=3 SV=1)

HSP 1 Score: 112 bits (281), Expect = 1.11e-30
Identity = 44/50 (88.00%), Postives = 44/50 (88.00%), Query Frame = 0


Query: 1   GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 50
           GS PPTCRSKCGRCWPC PVHVPIQPG   PLEYYPEAWRCKCGN LFMP
Sbjct: 90  GSSPPTCRSKCGRCWPCKPVHVPIQPGQKMPLEYYPEAWRCKCGNKLFMP 139

[Close]

BLAST of MC05g0503 vs. ExPASy TrEMBL
Match: A0A2H5PP20 (Epidermal patterning factor-like protein OS=Citrus unshiu OX=55188 GN=CUMW_154070 PE=3 SV=1)

HSP 1 Score: 111 bits (277), Expect = 1.26e-30
Identity = 45/50 (90.00%), Postives = 45/50 (90.00%), Query Frame = 0


Query: 1  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 50
          GS PPTCRSKCGRC PC PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Sbjct: 46 GSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 95

[Close]

BLAST of MC05g0503 vs. ExPASy TrEMBL
Match: A0A067L843 (Epidermal patterning factor-like protein OS=Jatropha curcas OX=180498 GN=JCGZ_02227 PE=3 SV=1)

HSP 1 Score: 111 bits (278), Expect = 1.49e-30
Identity = 45/50 (90.00%), Postives = 45/50 (90.00%), Query Frame = 0


Query: 1   GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 50
           GS PPTCRSKCGRC PC PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Sbjct: 64  GSSPPTCRSKCGRCLPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 113

[Close]

BLAST of MC05g0503 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 109.4 bits (272), Expect = 8.6e-25
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0


Query: 1   GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 51
           GS PPTCRSKCG+C PC PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of MC05g0503 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 99.0 bits (245), Expect = 1.2e-21
Identity = 40/50 (80.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 1   GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 51
           GS PP CR KCG+C PC  VHVPIQPGL  PLEYYPEAWRCKCGN LFMP
Sbjct: 58  GSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of MC05g0503 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 92.8 bits (229), Expect = 8.3e-20
Identity = 36/50 (72.00%), Postives = 38/50 (76.00%), Query Frame = 0


Query: 1   GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 51
           GS PP C SKCGRC PC PVHVP+ PG     EYYPEAWRCKCGN L+MP
Sbjct: 181 GSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 230

[Close]

BLAST of MC05g0503 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 92.8 bits (229), Expect = 8.3e-20
Identity = 36/50 (72.00%), Postives = 38/50 (76.00%), Query Frame = 0


Query: 1   GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP 51
           GS PP C SKCGRC PC PVHVP+ PG     EYYPEAWRCKCGN L+MP
Sbjct: 107 GSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of MC05g0503 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 43.9 bits (102), Expect = 4.4e-05
Identity = 21/47 (44.68%), Postives = 24/47 (51.06%), Query Frame = 0


Query: 1   GSCPPTCRSKCGRCWPCDPVHVPI---QPGLS-FPLEYYPEAWRCKC 44
           GS PP+C  KC  C PC+ +  P     P LS     Y PE WRC C
Sbjct: 58  GSKPPSCEKKCYGCEPCEAIQFPTISSIPHLSPHYANYQPEGWRCHC 104

The following BLAST results are available for this feature:

BLAST of MC05g0503 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V3I3	1.2e-23	88.00	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LUH9	1.6e-20	80.00	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1PEY6	1.2e-18	72.00	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q7M1E7	4.6e-07	40.82	Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1	[more]
Q9FY19	6.0e-07	40.82	Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1	[more]

BLAST of MC05g0503 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_030508149.1	1.10e-31	94.00	EPIDERMAL PATTERNING FACTOR-like protein 4 [Cannabis sativa] >KAF4352870.1 hypot...	[more]
KAG6597420.1	1.13e-31	88.00	EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subs...	[more]
XP_038905188.1	1.17e-31	90.00	EPIDERMAL PATTERNING FACTOR-like protein 4 [Benincasa hispida]	[more]
XP_021606945.1	1.05e-30	90.00	EPIDERMAL PATTERNING FACTOR-like protein 4 [Manihot esculenta] >OAY55695.1 hypot...	[more]
5XKN_E	1.58e-30	88.00	Crystal structure of plant receptor ERL2 in complexe with EPFL4 [Arabidopsis tha...	[more]

BLAST of MC05g0503 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J6E4U4	5.33e-32	94.00	Epidermal patterning factor-like protein OS=Cannabis sativa OX=3483 GN=F8388_002...	[more]
A0A2C9W8D5	5.06e-31	90.00	Epidermal patterning factor-like protein OS=Manihot esculenta OX=3983 GN=MANES_0...	[more]
A0A3S3P4G4	1.11e-30	88.00	Epidermal patterning factor-like protein OS=Cinnamomum micranthum f. kanehirae O...	[more]
A0A2H5PP20	1.26e-30	90.00	Epidermal patterning factor-like protein OS=Citrus unshiu OX=55188 GN=CUMW_15407...	[more]
A0A067L843	1.49e-30	90.00	Epidermal patterning factor-like protein OS=Jatropha curcas OX=180498 GN=JCGZ_02...	[more]

BLAST of MC05g0503 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14723.1	8.6e-25	88.00	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);...	[more]
AT3G22820.1	1.2e-21	80.00	allergen-related	[more]
AT2G30370.1	8.3e-20	72.00	allergen-related	[more]
AT2G30370.2	8.3e-20	72.00	allergen-related	[more]
AT3G13898.1	4.4e-05	44.68	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 1..50 e-value: 3.0E-17 score: 62.3
None	No IPR available	PANTHER	PTHR33109:SF69	PUTATIVE, EXPRESSED-RELATED	coord: 1..50
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 1..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0503.1	MC05g0503.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region