MC05g0453 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g0453
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionserine/arginine-rich splicing factor RS31-like
LocationMC05: 3341645 .. 3345044 (-)
RNA-Seq ExpressionMC05g0453
SyntenyMC05g0453
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTTCTCGTTCTAATATTTTTAAATCCCCGAAAACCCCTTCTGGCAATCTAACGGTGAAGCCTCGGTCAATAAAACATTCTATGTAAAGTCAGTTAATCGAACGGTCGAAATATTTCGTCCGGTATCAATGCTAAGGCTTTCTTCGGCTATTTAAAAAGAATCAATCGGCTTACATAGGGTTTCATCGAAAAGACACAGACTTTCTCTTCGTTTCTCTCCTAGGGTTTTTCTTCTCCCGTTCGAATCGAAGAATCTGCGAGGTTTGATTTCTTCAATCCTTTGATCCACGCTATTCTATCTTCTTCATTACGCTAGTTGATCGTTTTATTTCTGTTTCTGGTCAAATCCCGAGAGTAAGTTATTGTTTCACGCATTCATTTAGTCCCTATAATCGTCACTTCTCTATTCTGGTTTGGCTGTAAAGGAAATTGATAGCATAATGCTGATGAAGTTGATTTCTAATCTTTTTTCACGGAAGCTGTTATCTTCTTTCACTTATTATTTGTTTAATCTTGTTAACTTATTGTCTTCGCTTTTTTTGGGTTGAATGTTTTGTACAGCGCGATTGACAGTAGCAACTATGAGGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCGGAGCTGGAGCGGTTATTCGCAAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGTATATTGCAATTTCTTTGTGATAGTATGGAATGCTCGTCTTTAACCAAGTTATTATGAAATTGGTCATAACTTTTGCAGATTTTATTCTTATGAGGATCATTTTAATGGTCAGATTTAAACCAATTGCTAATGTCAATTGTTACTCTTAAGACTATTTATTTGTATTACAAATGATGAAATGGGTTGGTTGAGGTGCGTGCTTAATTTTTTTGCTCTTGTACATTGTCAAACTGAAAATTTTGTTATCAAGTTTTGACGTCGAAGCTAATTTATGTATAGATATTATTGTGCTCATCTTGGTTAAGTACCTGCGATCGGATATTGCATTTGGATTATGGGTATACATTTCAGTCTGTATGTTATGTATGTATTGATGGATGACTCTTTGGATATACGTCTTACTAAATAGTGTGGTATGTAATTCCCATCTTCAAATGTCCTTGTTGGTTATCTTTTTTTTTTAGTTACTTGTTCTTGACTTTGCTCAAATTTGATCATTCGAATCATCTTTACTTCTCCTTGTAAACCAATCTTGCTTACTCTGGGTTATGAGTTTAAATTGTTGTTAACTACTGTAATGTCCTTGGCCCTCACCTGCTATGCTGAGATCCTTAACCCTCCTTAGTGATATATTAGTCAATGATTTAATACACTTTTTAGGTATATTGGTTTATTAAATCATGGTATTTGTGTTCGTGGCTTTGGCTGCTCCACTGATATTAGAACTAGGTATGAAAGTAATGTCATGTTTTTACTAATAATACTAAAATTGATGTTTTTTCAATTATAAAACCCAGTTCTGTGACATGGACGCGTAGCTTTCATGCTATGATAATATCCAATGTCCTCTTTTCTGATGGAAAATTGATGGCAGACACGAATTTACTATTTTATGGGGAAAACCTCCATATAAGATGTTTCTTTTGACGCAGGAATTTCTACTAAGGAAAATGAGCCAAGCTACTATATCGGCTCACCACCATCTGTGCATAATAATTAATTTGGAAGGAAACTTCCTGCTAGCCTCTCCTACAGATAGCATCATCCTGATTTTTCTTCAATCAATCATTCGTCATTCATCTACCTCATCACTTAAGTTGCATTCACCAGGATCGTCTTAATGGATTGATCTTTATCTCATGCCTCATCAATTAAGTTGCAATTCACCAGACTCGTCTTAATGGATTGATCTTTATCTCATGCCTTGCCTACCTATCATCACTGATCATAGGACATGACTGAAATCTGGCCATGCCTTCCATATGATAATAGTGGCTGAAATGAAATCTGTCATGCCATGCCATGCCTTCCATTTCTGAACTCGTGCTGTGTGAAAGGCGAAGCATGGTTGAAATTTTGGATTTAAACCTTTAGTATGCAACCATCTTAGTTCATCATGCAACGTCTCTACCGCTATATGTGCATCAGTCCTCCCATATTTGCAGGTGTTGTACTTTTTATAGTTTATCCCAGGGAAAGAAATCTTGAGGTTGAGTGACATAGCTGCTAAATGGATAACTATCTGACATCTTACCTTGGTGTATGTCTAATTAGTTTAATTTGCAGGTTTTGCTTTTGTTTACTTTGAAGATGAGAGGGATGCGGAAGATGCCATTCGTGGCCTTGATAATATGGCATTTGGTTATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGGTAGAGATCTCTCTCTCTGTCTCCATATTATCCCATTCAATATGTGGTTATATCTTACATTTTTTTTTGTTGTGTTAGGGTGAACGAGGTCGTCATCGTGATGGATCCAAGTCAATTGCAAATCAGAGGCCAACCAAAACTCTGTTTGTGATCAACTTTGACCCAATTCGTACCAGAGTCCGTGATATTGAAAGACACTTTGAACCTTATGGAAAGGTCCTCAATGTTCGCATAAGAAGGAACTTTGCATTTGTGCAATTTGAGACACAAGAGGATGCAACTAAAGCCCTTGAGTGTACCCACATGAGGTAAGCATTATTTATGAATTTTCCACATGCTTGCTTTTTTTCCATTTTTTTGATCTGCAATGGATATTAAATATTGTAATACCTTTGTTATTTTTCAGCAAAATATTAGACAGGGTTGTGTCTGTTGAGTATGCTTTGAGGGACGATGGTGAGAGGGGTGACCCGTTTGATGAGAGCCCTCGAAGAGCAGCTTATGGACGACCTGGGGACAGTAGTCCTTATCGGAGGTCACCTAGTCCTGCATTTCGACGTCGACCTAGTCCTGACTATGGCCGAGCTCGCAGCCCTGCGTATGATAGGTATAATGGCCCTTACGAACGCCGCCGGAGTCCTGATTATGGTCGAAATCGAAGCCCTGAATATGGTAGATTTCGTAGGTATGTATATTATACCACAGCCTCCATTTCAATTACTAGCCCTGTCATTGAAGCTGACCACCCTTTTCTCTCGTGTCTTTGTTGACAGTCGTTCACCCATTCGGCGGTCAAGAACCTGAAGGAAATCAACGTTTAAGTTTCAGTTACATTCTTAGGTTTAGGGATATGATGGAGTGTTTAAGATAGTGACTAGTTCTCTGTACAACCCGTATTGTTGGTAGTTCATTCTAAGACAATGAGATACACGTTTATCTCTGTTTAACTAGCTGGGTGATGTTAGTACATGTCAAGGTGATTGTGTTGTCTCCACTGTCAATGCTAATTCCACTTTAATTACAACGTTGGA

mRNA sequence

ATCTTCTCGTTCTAATATTTTTAAATCCCCGAAAACCCCTTCTGGCAATCTAACGGTGAAGCCTCGGTCAATAAAACATTCTATGTAAAGTCAGTTAATCGAACGGTCGAAATATTTCGTCCGGTATCAATGCTAAGGCTTTCTTCGGCTATTTAAAAAGAATCAATCGGCTTACATAGGGTTTCATCGAAAAGACACAGACTTTCTCTTCGTTTCTCTCCTAGGGTTTTTCTTCTCCCGTTCGAATCGAAGAATCTGCGAGCGCGATTGACAGTAGCAACTATGAGGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCGGAGCTGGAGCGGTTATTCGCAAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGTTTTGCTTTTGTTTACTTTGAAGATGAGAGGGATGCGGAAGATGCCATTCGTGGCCTTGATAATATGGCATTTGGTTATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGGGTGAACGAGGTCGTCATCGTGATGGATCCAAGTCAATTGCAAATCAGAGGCCAACCAAAACTCTGTTTGTGATCAACTTTGACCCAATTCGTACCAGAGTCCGTGATATTGAAAGACACTTTGAACCTTATGGAAAGGTCCTCAATGTTCGCATAAGAAGGAACTTTGCATTTGTGCAATTTGAGACACAAGAGGATGCAACTAAAGCCCTTGAGTGTACCCACATGAGCAAAATATTAGACAGGGTTGTGTCTGTTGAGTATGCTTTGAGGGACGATGGTGAGAGGGGTGACCCGTTTGATGAGAGCCCTCGAAGAGCAGCTTATGGACGACCTGGGGACAGTAGTCCTTATCGGAGGTCACCTAGTCCTGCATTTCGACGTCGACCTAGTCCTGACTATGGCCGAGCTCGCAGCCCTGCGTATGATAGGTATAATGGCCCTTACGAACGCCGCCGGAGTCCTGATTATGGTCGAAATCGAAGCCCTGAATATGGTAGATTTCGTAGTCGTTCACCCATTCGGCGGTCAAGAACCTGAAGGAAATCAACGTTTAAGTTTCAGTTACATTCTTAGGTTTAGGGATATGATGGAGTGTTTAAGATAGTGACTAGTTCTCTGTACAACCCGTATTGTTGGTAGTTCATTCTAAGACAATGAGATACACGTTTATCTCTGTTTAACTAGCTGGGTGATGTTAGTACATGTCAAGGTGATTGTGTTGTCTCCACTGTCAATGCTAATTCCACTTTAATTACAACGTTGGA

Coding sequence (CDS)

ATGAGGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCGGAGCTGGAGCGGTTATTCGCAAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGTTTTGCTTTTGTTTACTTTGAAGATGAGAGGGATGCGGAAGATGCCATTCGTGGCCTTGATAATATGGCATTTGGTTATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGGGTGAACGAGGTCGTCATCGTGATGGATCCAAGTCAATTGCAAATCAGAGGCCAACCAAAACTCTGTTTGTGATCAACTTTGACCCAATTCGTACCAGAGTCCGTGATATTGAAAGACACTTTGAACCTTATGGAAAGGTCCTCAATGTTCGCATAAGAAGGAACTTTGCATTTGTGCAATTTGAGACACAAGAGGATGCAACTAAAGCCCTTGAGTGTACCCACATGAGCAAAATATTAGACAGGGTTGTGTCTGTTGAGTATGCTTTGAGGGACGATGGTGAGAGGGGTGACCCGTTTGATGAGAGCCCTCGAAGAGCAGCTTATGGACGACCTGGGGACAGTAGTCCTTATCGGAGGTCACCTAGTCCTGCATTTCGACGTCGACCTAGTCCTGACTATGGCCGAGCTCGCAGCCCTGCGTATGATAGGTATAATGGCCCTTACGAACGCCGCCGGAGTCCTGATTATGGTCGAAATCGAAGCCCTGAATATGGTAGATTTCGTAGTCGTTCACCCATTCGGCGGTCAAGAACCTGA

Protein sequence

MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFRSRSPIRRSRT
Homology
[Close]
BLAST of MC05g0453 vs. ExPASy Swiss-Prot
Match: P92964 (Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS31 PE=1 SV=2)

HSP 1 Score: 350.9 bits (899), Expect = 1.2e-95
Identity = 189/263 (71.86%), Postives = 209/263 (79.47%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           MRP+FVGNF Y+TRQS+LERLF KYGRV+R+DMKSG+AFVYFEDERDAEDAIR LDN  F
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120
           GY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINFDPIRT+  DIE+HFEPYGKV
Sbjct: 61  GYEKRRLSVEWAKGERGRPRGDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKV 120

Query: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRR 180
            NVRIRRNF+FVQFETQEDATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR
Sbjct: 121 TNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNGGRSPRR 180

Query: 181 --AAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGP--YERRRSP------- 240
             +   R   S  Y R PSP   RRPSPDYGRARSP YDRY GP  YERRRSP       
Sbjct: 181 SLSPVYRRRPSPDYGRRPSPGQGRRPSPDYGRARSPEYDRYKGPAAYERRRSPDYGRRSS 240

Query: 241 DYGRNRSPEYGRFRSRSPIRRSR 252
           DYGR RSP Y R+RSRSP+ R R
Sbjct: 241 DYGRQRSPGYDRYRSRSPVPRGR 263

[Close]
BLAST of MC05g0453 vs. ExPASy Swiss-Prot
Match: Q9ZPX8 (Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS31A PE=1 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.1e-92
Identity = 180/251 (71.71%), Postives = 205/251 (81.67%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           MR ++VGNF YDTR S+LERLF+K+GRV+R+DMKSG+AFVYFEDERDAEDAIR  DN  F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 61  GYDRRRLSVEWAR---GERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPY 120
           GY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPIRTR RD+ERHFEPY
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG-KAVSNQRPTKTLFVINFDPIRTRERDMERHFEPY 120

Query: 121 GKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESP 180
           GKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S 
Sbjct: 121 GKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGEREDRYAGSR 180

Query: 181 RRAAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNG--PYERRRSPDYGRNRS 240
           R             RRSPSP +RRRPSPDY R RSP YDRY G  PYERR+SPDYGR RS
Sbjct: 181 R-------------RRSPSPVYRRRPSPDYTRRRSPEYDRYKGPAPYERRKSPDYGR-RS 236

Query: 241 PEYGRFRSRSP 247
            +YGR R+RSP
Sbjct: 241 SDYGRARARSP 236

[Close]
BLAST of MC05g0453 vs. ExPASy Swiss-Prot
Match: P92965 (Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS40 PE=1 SV=2)

HSP 1 Score: 268.1 bits (684), Expect = 1.0e-70
Identity = 156/266 (58.65%), Postives = 190/266 (71.43%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           M+P+F GNF YD R+ +LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   F
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLFVINFDPIRTRVRDIERHFEP 120
           G   RRL VEW + ERG   R   GS +S ++ RP+KTLFVINFD   TR RD+E+HFEP
Sbjct: 61  GRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEP 120

Query: 121 YGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDES 180
           YGK++NVRIRRNFAF+Q+E QEDAT+AL+ ++ SK++D+V+SVEYA++DD  RG+     
Sbjct: 121 YGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPE 180

Query: 181 PRRAAYGRPGDSSP--YRRSPSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD- 240
            RR       D SP   RRSPSP  R R SPDYGR  SP  AY  +R +  Y RRRSP  
Sbjct: 181 RRR-------DRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSP 240

Query: 241 YGRNR--SPEYGRFR--SRSPIRRSR 252
           Y ++R  SPEYGR R  + SP RR R
Sbjct: 241 YKKSRRGSPEYGRDRRGNDSPRRRER 259

[Close]
BLAST of MC05g0453 vs. ExPASy Swiss-Prot
Match: P92966 (Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS41 PE=1 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-70
Identity = 146/256 (57.03%), Postives = 178/256 (69.53%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           M+P+F GNF YD R+S+LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   +
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GYDRRRLSVEWARGER---GRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPY 120
           G   RRL VEW + +R   GR     +S +  RP+KTLFVINFD   TR RD+ERHFEPY
Sbjct: 61  GRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPY 120

Query: 121 GKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESP 180
           GK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    
Sbjct: 121 GKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPER 180

Query: 181 RRAAYGRPGDSSP--YRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRS 240
           RR       D SP   RRSPSP  R R SPDYGR  SP   +       R SPDYGR R 
Sbjct: 181 RR-------DRSPDRRRRSPSPYRRERGSPDYGRGASPVAHK-----RERTSPDYGRGR- 237

Query: 241 PEYGRFRSRSPIRRSR 252
                 RS SP +R+R
Sbjct: 241 ------RSPSPYKRAR 237

[Close]
BLAST of MC05g0453 vs. ExPASy Swiss-Prot
Match: Q9NEW6 (Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans OX=6239 GN=rsp-3 PE=1 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 2.5e-16
Identity = 85/269 (31.60%), Postives = 114/269 (42.38%), Query Frame = 0 

Query: 4   IFVGNFGYDTRQSELERLFAKYGRVERIDMKSG----FAFVYFEDERDAEDAIRGLDNMA 63
           ++VGN   D R+ E+E +F KYGR++ +D+KSG    FAFV FED RDAEDA+R  D   
Sbjct: 11  VYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD--G 70

Query: 64  FGYDRRRLSVEWARG------------ERGRH--------RDGSKSIANQRPTKTLFVIN 123
           + +D RR+ VE+ RG            + G H        R G +    QR T    ++ 
Sbjct: 71  YEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVE 130

Query: 124 FDPIRTRVRDIERHFEPYGKVLNVRIRRN-FAFVQFETQEDATKALECTHMSKILDRVVS 183
             P     +D++ H    G V    + R+    V+F   ED   A+     +K       
Sbjct: 131 GLPPTGSWQDLKDHMRDAGDVCYADVARDGTGVVEFTRYEDVKYAVRKLDDTKFRSHEGE 190

Query: 184 VEY-ALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDR 243
             Y  +R+D   G            G  G      RS SP   RR SP Y   RS     
Sbjct: 191 TAYIRVREDNSSGG-----------GSGGGGRDRSRSRSPRAERRASPKYSPRRS----- 250

Query: 244 YNGPYERRRSPDYGRNRSPEYGRFRSRSP 247
                 R RS    R+RS    R  SRSP
Sbjct: 251 ------RSRSRSRSRSRSRSASRSPSRSP 255

[Close]
BLAST of MC05g0453 vs. NCBI nr
Match: XP_022147391.1 (serine/arginine-rich splicing factor RS31-like isoform X1 [Momordica charantia])

HSP 1 Score: 507 bits (1305), Expect = 4.11e-181
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60

Query: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120
           GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 181 AYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGR 240
           AYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGR
Sbjct: 181 AYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGR 240

Query: 241 FRSRSPIRRSRT 252
           FRSRSPIRRSRT
Sbjct: 241 FRSRSPIRRSRT 252

[Close]
BLAST of MC05g0453 vs. NCBI nr
Match: XP_038893478.1 (serine/arginine-rich splicing factor RS31 isoform X1 [Benincasa hispida])

HSP 1 Score: 488 bits (1257), Expect = 8.87e-174
Identity = 246/254 (96.85%), Postives = 248/254 (97.64%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ F
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 60

Query: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120
           GYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 181 AYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG- 240
            YGRPGDS PYRRSPSP FRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG 
Sbjct: 181 GYGRPGDS-PYRRSPSPVFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGG 240

Query: 241 -RFRSRSPIRRSRT 252
            RFRSRSPIRRSRT
Sbjct: 241 GRFRSRSPIRRSRT 253

[Close]
BLAST of MC05g0453 vs. NCBI nr
Match: XP_004133800.1 (serine/arginine-rich splicing factor RS31 isoform X1 [Cucumis sativus] >XP_008437857.1 PREDICTED: serine/arginine-rich splicing factor RS31-like isoform X1 [Cucumis melo] >KAA0048868.1 serine/arginine-rich splicing factor RS31 isoform X2 [Cucumis melo var. makuwa] >TYK20820.1 serine/arginine-rich splicing factor RS31 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 481 bits (1238), Expect = 6.99e-171
Identity = 244/254 (96.06%), Postives = 247/254 (97.24%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ F
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 60

Query: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120
           GYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 181 A-YGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG 240
             YGRPGDS PYRRSPSP FRRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYG
Sbjct: 181 GGYGRPGDS-PYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYG 240

Query: 241 -RFRSRSPIRRSRT 252
            RFRSRSPIRRSRT
Sbjct: 241 GRFRSRSPIRRSRT 253

[Close]
BLAST of MC05g0453 vs. NCBI nr
Match: XP_023539917.1 (serine/arginine-rich splicing factor RS31-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 459 bits (1180), Expect = 4.19e-162
Identity = 231/252 (91.67%), Postives = 242/252 (96.03%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           M+PIFVGNFGYDTRQSELER FAKYGRV+RIDMKSGFAFVYFEDERDA+DAIRGLDNM F
Sbjct: 1   MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 60

Query: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120
           G+DRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINFDPI TRVRDIERHFEPYGKV
Sbjct: 61  GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 120

Query: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180
           LNVRIRRNF+FVQFETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGDP+D+SPRRA
Sbjct: 121 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRA 180

Query: 181 AYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGR 240
           AYGRPGDS PYRRSPSP  RRRPSPDYG  RSPAYDRYNGP ERR+SPDY RNRSPEYGR
Sbjct: 181 AYGRPGDS-PYRRSPSP-LRRRPSPDYG-PRSPAYDRYNGPRERRKSPDYARNRSPEYGR 240

Query: 241 FRSRSPIRRSRT 252
           +RSRSPIRRSRT
Sbjct: 241 YRSRSPIRRSRT 249

[Close]
BLAST of MC05g0453 vs. NCBI nr
Match: KAE8650222.1 (hypothetical protein Csa_011015 [Cucumis sativus])

HSP 1 Score: 481 bits (1238), Expect = 2.08e-161
Identity = 244/254 (96.06%), Postives = 247/254 (97.24%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ F
Sbjct: 681 MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 740

Query: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120
           GYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 741 GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 800

Query: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 801 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 860

Query: 181 A-YGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG 240
             YGRPGDS PYRRSPSP FRRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYG
Sbjct: 861 GGYGRPGDS-PYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYG 920

Query: 241 -RFRSRSPIRRSRT 252
            RFRSRSPIRRSRT
Sbjct: 921 GRFRSRSPIRRSRT 933

[Close]
BLAST of MC05g0453 vs. ExPASy TrEMBL
Match: A0A6J1D279 (serine/arginine-rich splicing factor RS31-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016334 PE=4 SV=1)

HSP 1 Score: 507 bits (1305), Expect = 1.99e-181
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60

Query: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120
           GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 181 AYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGR 240
           AYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGR
Sbjct: 181 AYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGR 240

Query: 241 FRSRSPIRRSRT 252
           FRSRSPIRRSRT
Sbjct: 241 FRSRSPIRRSRT 252

[Close]
BLAST of MC05g0453 vs. ExPASy TrEMBL
Match: A0A5D3DBI0 (Serine/arginine-rich splicing factor RS31 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00820 PE=4 SV=1)

HSP 1 Score: 481 bits (1238), Expect = 3.38e-171
Identity = 244/254 (96.06%), Postives = 247/254 (97.24%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ F
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 60

Query: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120
           GYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 181 A-YGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG 240
             YGRPGDS PYRRSPSP FRRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYG
Sbjct: 181 GGYGRPGDS-PYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYG 240

Query: 241 -RFRSRSPIRRSRT 252
            RFRSRSPIRRSRT
Sbjct: 241 GRFRSRSPIRRSRT 253

[Close]
BLAST of MC05g0453 vs. ExPASy TrEMBL
Match: A0A0A0L8H4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119350 PE=4 SV=1)

HSP 1 Score: 481 bits (1238), Expect = 3.38e-171
Identity = 244/254 (96.06%), Postives = 247/254 (97.24%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ F
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 60

Query: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120
           GYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 181 A-YGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG 240
             YGRPGDS PYRRSPSP FRRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYG
Sbjct: 181 GGYGRPGDS-PYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYG 240

Query: 241 -RFRSRSPIRRSRT 252
            RFRSRSPIRRSRT
Sbjct: 241 GRFRSRSPIRRSRT 253

[Close]
BLAST of MC05g0453 vs. ExPASy TrEMBL
Match: A0A1S3AUZ7 (serine/arginine-rich splicing factor RS31-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483164 PE=4 SV=1)

HSP 1 Score: 481 bits (1238), Expect = 3.38e-171
Identity = 244/254 (96.06%), Postives = 247/254 (97.24%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ F
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 60

Query: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120
           GYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180
           LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 181 A-YGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG 240
             YGRPGDS PYRRSPSP FRRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYG
Sbjct: 181 GGYGRPGDS-PYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYG 240

Query: 241 -RFRSRSPIRRSRT 252
            RFRSRSPIRRSRT
Sbjct: 241 GRFRSRSPIRRSRT 253

[Close]
BLAST of MC05g0453 vs. ExPASy TrEMBL
Match: A0A6J1ICY3 (serine/arginine-rich splicing factor RS31-like OS=Cucurbita maxima OX=3661 GN=LOC111474713 PE=4 SV=1)

HSP 1 Score: 454 bits (1169), Expect = 9.63e-161
Identity = 229/252 (90.87%), Postives = 240/252 (95.24%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           M+PIFVGNFGYDTRQSELER FAKYGRV+RIDMKSGFAFVYFEDERDA+DAIRGLDNM F
Sbjct: 1   MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 60

Query: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120
           G+DRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINFDPI TRVRDIERHFEPYGKV
Sbjct: 61  GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 120

Query: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180
           LNVRIRRNF+FVQFETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGDP+D+SPRR 
Sbjct: 121 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT 180

Query: 181 AYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGR 240
           AYG PGDS PYRRSPSP  RRRPSPDYG  RSPAYDRYNGP ERR+SPDY RNRSPEYGR
Sbjct: 181 AYGPPGDS-PYRRSPSP-LRRRPSPDYG-PRSPAYDRYNGPRERRKSPDYARNRSPEYGR 240

Query: 241 FRSRSPIRRSRT 252
           +RSRSPIRRSRT
Sbjct: 241 YRSRSPIRRSRT 249

[Close]
BLAST of MC05g0453 vs. TAIR 10
Match: AT3G61860.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 350.9 bits (899), Expect = 8.5e-97
Identity = 189/263 (71.86%), Postives = 209/263 (79.47%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           MRP+FVGNF Y+TRQS+LERLF KYGRV+R+DMKSG+AFVYFEDERDAEDAIR LDN  F
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120
           GY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINFDPIRT+  DIE+HFEPYGKV
Sbjct: 61  GYEKRRLSVEWAKGERGRPRGDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKV 120

Query: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRR 180
            NVRIRRNF+FVQFETQEDATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR
Sbjct: 121 TNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNGGRSPRR 180

Query: 181 --AAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGP--YERRRSP------- 240
             +   R   S  Y R PSP   RRPSPDYGRARSP YDRY GP  YERRRSP       
Sbjct: 181 SLSPVYRRRPSPDYGRRPSPGQGRRPSPDYGRARSPEYDRYKGPAAYERRRSPDYGRRSS 240

Query: 241 DYGRNRSPEYGRFRSRSPIRRSR 252
           DYGR RSP Y R+RSRSP+ R R
Sbjct: 241 DYGRQRSPGYDRYRSRSPVPRGR 263

[Close]
BLAST of MC05g0453 vs. TAIR 10
Match: AT2G46610.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 340.1 bits (871), Expect = 1.5e-93
Identity = 180/251 (71.71%), Postives = 205/251 (81.67%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           MR ++VGNF YDTR S+LERLF+K+GRV+R+DMKSG+AFVYFEDERDAEDAIR  DN  F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 61  GYDRRRLSVEWAR---GERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPY 120
           GY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPIRTR RD+ERHFEPY
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG-KAVSNQRPTKTLFVINFDPIRTRERDMERHFEPY 120

Query: 121 GKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESP 180
           GKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S 
Sbjct: 121 GKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGEREDRYAGSR 180

Query: 181 RRAAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNG--PYERRRSPDYGRNRS 240
           R             RRSPSP +RRRPSPDY R RSP YDRY G  PYERR+SPDYGR RS
Sbjct: 181 R-------------RRSPSPVYRRRPSPDYTRRRSPEYDRYKGPAPYERRKSPDYGR-RS 236

Query: 241 PEYGRFRSRSP 247
            +YGR R+RSP
Sbjct: 241 SDYGRARARSP 236

[Close]
BLAST of MC05g0453 vs. TAIR 10
Match: AT2G46610.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 285.4 bits (729), Expect = 4.4e-77
Identity = 155/221 (70.14%), Postives = 176/221 (79.64%), Query Frame = 0 

Query: 31  IDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWAR---GERGRHRDGSKSIA 90
           + + +G+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++
Sbjct: 5   LHIDAGYAFVYFEDERDAEDAIRRTDNTTFGYGRRKLSVEWAKDFQGERGKPRDG-KAVS 64

Query: 91  NQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECT 150
           NQRPTKTLFVINFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAFVQF TQEDATKAL+ T
Sbjct: 65  NQRPTKTLFVINFDPIRTRERDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDST 124

Query: 151 HMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFRRRPSPDY 210
           H SK+LD+VVSVEYALR+ GER D +  S R             RRSPSP +RRRPSPDY
Sbjct: 125 HNSKLLDKVVSVEYALREAGEREDRYAGSRR-------------RRSPSPVYRRRPSPDY 184

Query: 211 GRARSPAYDRYNG--PYERRRSPDYGRNRSPEYGRFRSRSP 247
            R RSP YDRY G  PYERR+SPDYGR RS +YGR R+RSP
Sbjct: 185 TRRRSPEYDRYKGPAPYERRKSPDYGR-RSSDYGRARARSP 210

[Close]
BLAST of MC05g0453 vs. TAIR 10
Match: AT4G25500.1 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 268.1 bits (684), Expect = 7.3e-72
Identity = 156/266 (58.65%), Postives = 190/266 (71.43%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           M+P+F GNF YD R+ +LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   F
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLFVINFDPIRTRVRDIERHFEP 120
           G   RRL VEW + ERG   R   GS +S ++ RP+KTLFVINFD   TR RD+E+HFEP
Sbjct: 61  GRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEP 120

Query: 121 YGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDES 180
           YGK++NVRIRRNFAF+Q+E QEDAT+AL+ ++ SK++D+V+SVEYA++DD  RG+     
Sbjct: 121 YGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPE 180

Query: 181 PRRAAYGRPGDSSP--YRRSPSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD- 240
            RR       D SP   RRSPSP  R R SPDYGR  SP  AY  +R +  Y RRRSP  
Sbjct: 181 RRR-------DRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSP 240

Query: 241 YGRNR--SPEYGRFR--SRSPIRRSR 252
           Y ++R  SPEYGR R  + SP RR R
Sbjct: 241 YKKSRRGSPEYGRDRRGNDSPRRRER 259

[Close]
BLAST of MC05g0453 vs. TAIR 10
Match: AT4G25500.4 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 268.1 bits (684), Expect = 7.3e-72
Identity = 156/266 (58.65%), Postives = 190/266 (71.43%), Query Frame = 0 

Query: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60
           M+P+F GNF YD R+ +LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   F
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLFVINFDPIRTRVRDIERHFEP 120
           G   RRL VEW + ERG   R   GS +S ++ RP+KTLFVINFD   TR RD+E+HFEP
Sbjct: 61  GRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEP 120

Query: 121 YGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDES 180
           YGK++NVRIRRNFAF+Q+E QEDAT+AL+ ++ SK++D+V+SVEYA++DD  RG+     
Sbjct: 121 YGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPE 180

Query: 181 PRRAAYGRPGDSSP--YRRSPSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD- 240
            RR       D SP   RRSPSP  R R SPDYGR  SP  AY  +R +  Y RRRSP  
Sbjct: 181 RRR-------DRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSP 240

Query: 241 YGRNR--SPEYGRFR--SRSPIRRSR 252
           Y ++R  SPEYGR R  + SP RR R
Sbjct: 241 YKKSRRGSPEYGRDRRGNDSPRRRER 259

The following BLAST results are available for this feature:
BLAST of MC05g0453 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P929641.2e-9571.86Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS3... [more]
Q9ZPX82.1e-9271.71Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS... [more]
P929651.0e-7058.65Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS4... [more]
P929661.3e-7057.03Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS4... [more]
Q9NEW62.5e-1631.60Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans OX=62... [more]
BLAST of MC05g0453 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022147391.14.11e-181100.00serine/arginine-rich splicing factor RS31-like isoform X1 [Momordica charantia][more]
XP_038893478.18.87e-17496.85serine/arginine-rich splicing factor RS31 isoform X1 [Benincasa hispida][more]
XP_004133800.16.99e-17196.06serine/arginine-rich splicing factor RS31 isoform X1 [Cucumis sativus] >XP_00843... [more]
XP_023539917.14.19e-16291.67serine/arginine-rich splicing factor RS31-like isoform X1 [Cucurbita pepo subsp.... [more]
KAE8650222.12.08e-16196.06hypothetical protein Csa_011015 [Cucumis sativus][more]
BLAST of MC05g0453 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D2791.99e-181100.00serine/arginine-rich splicing factor RS31-like isoform X1 OS=Momordica charantia... [more]
A0A5D3DBI03.38e-17196.06Serine/arginine-rich splicing factor RS31 isoform X2 OS=Cucumis melo var. makuwa... [more]
A0A0A0L8H43.38e-17196.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119350 PE=4 SV=1[more]
A0A1S3AUZ73.38e-17196.06serine/arginine-rich splicing factor RS31-like isoform X1 OS=Cucumis melo OX=365... [more]
A0A6J1ICY39.63e-16190.87serine/arginine-rich splicing factor RS31-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
BLAST of MC05g0453 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G61860.18.5e-9771.86RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT2G46610.11.5e-9371.71RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT2G46610.24.4e-7770.14RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G25500.17.3e-7258.65arginine/serine-rich splicing factor 35 [more]
AT4G25500.47.3e-7258.65arginine/serine-rich splicing factor 35 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 94..160
e-value: 3.3E-17
score: 73.2
coord: 3..70
e-value: 2.8E-15
score: 66.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 95..157
e-value: 3.2E-12
score: 46.1
coord: 4..60
e-value: 8.8E-17
score: 60.7
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 2..74
score: 17.540512
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 93..164
score: 15.220978
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 86..171
e-value: 4.7E-19
score: 70.3
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..85
e-value: 8.3E-22
score: 79.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..181
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 4..223
NoneNo IPR availableCDDcd12466RRM2_AtRSp31_likecoord: 94..163
e-value: 3.54202E-41
score: 133.828
IPR029537Arginine/serine-rich-splicing factor RSP31/31APANTHERPTHR23147:SF146SERINE/ARGININE-RICH SPLICING FACTOR RS31-RELATEDcoord: 4..223
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 2..166

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g0453.1MC05g0453.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0016607 nuclear speck
cellular_component GO:0005681 spliceosomal complex
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding