MC05g0445 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0445
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Krueppel-like factor
Location	MC05: 3297210 .. 3297458 (-)
RNA-Seq Expression	MC05g0445
Synteny	MC05g0445

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAAGAAGCAAAAGACCCTTTCAAGGGAGTTGATTGGAAAGCCGTGGGTGGCGATATGCAAAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATCAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCCTCTGCCATTGCATTCTATGGGGCCTTTATTGCAGGTGGAATTGGTGCTGGGATGCTGGTGGAGATCTGGATAAATGATAAAGTTAAA

mRNA sequence

ATGGGAGAAGAAGCAAAAGACCCTTTCAAGGGAGTTGATTGGAAAGCCGTGGGTGGCGATATGCAAAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATCAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCCTCTGCCATTGCATTCTATGGGGCCTTTATTGCAGGTGGAATTGGTGCTGGGATGCTGGTGGAGATCTGGATAAATGATAAAGTTAAA

Coding sequence (CDS)

ATGGGAGAAGAAGCAAAAGACCCTTTCAAGGGAGTTGATTGGAAAGCCGTGGGTGGCGATATGCAAAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATCAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCCTCTGCCATTGCATTCTATGGGGCCTTTATTGCAGGTGGAATTGGTGCTGGGATGCTGGTGGAGATCTGGATAAATGATAAAGTTAAA

Protein sequence

MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGAFIAGGIGAGMLVEIWINDKVK

Homology

[Close]

BLAST of MC05g0445 vs. NCBI nr
Match: XP_023522177.1 (uncharacterized protein LOC111786056 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162 bits (409), Expect = 7.49e-50
Identity = 75/83 (90.36%), Postives = 79/83 (95.18%), Query Frame = 0


Query: 1  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
          M EEAKDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFY
Sbjct: 1  MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLPSVLAFY 60

Query: 61 GAFIAGGIGAGMLVEIWINDKVK 83
          GA IAGGIGAGMLVEIWINDKVK
Sbjct: 61 GACIAGGIGAGMLVEIWINDKVK 83

[Close]

BLAST of MC05g0445 vs. NCBI nr
Match: XP_022942020.1 (uncharacterized protein LOC111447184 [Cucurbita moschata] >KAG6597065.1 hypothetical protein SDJN03_10245, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028536.1 hypothetical protein SDJN02_09717 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159 bits (403), Expect = 6.16e-49
Identity = 74/83 (89.16%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
          M EEAKDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFY
Sbjct: 1  MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLPSVLAFY 60

Query: 61 GAFIAGGIGAGMLVEIWINDKVK 83
          GA IAGGIGAGMLVEIWI DKVK
Sbjct: 61 GACIAGGIGAGMLVEIWIKDKVK 83

[Close]

BLAST of MC05g0445 vs. NCBI nr
Match: XP_004133805.1 (uncharacterized protein LOC101207877 [Cucumis sativus] >KGN56411.1 hypothetical protein Csa_009724 [Cucumis sativus])

HSP 1 Score: 159 bits (402), Expect = 1.15e-48
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 2  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
          G E KDP KGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPS +AFYG
Sbjct: 11 GVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSVMAFYG 70

Query: 62 AFIAGGIGAGMLVEIWINDKVK 83
          A IAGGIGAGMLVEIWINDK+K
Sbjct: 71 ACIAGGIGAGMLVEIWINDKIK 92

[Close]

BLAST of MC05g0445 vs. NCBI nr
Match: XP_022975548.1 (uncharacterized protein LOC111475080 [Cucurbita maxima])

HSP 1 Score: 156 bits (395), Expect = 1.02e-47
Identity = 73/83 (87.95%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 1  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
          M EEAKDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSL S +AFY
Sbjct: 1  MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLSSVLAFY 60

Query: 61 GAFIAGGIGAGMLVEIWINDKVK 83
          GA IAGGIGAGMLVEIWI DKVK
Sbjct: 61 GACIAGGIGAGMLVEIWIKDKVK 83

[Close]

BLAST of MC05g0445 vs. NCBI nr
Match: XP_008437869.1 (PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo] >KAA0048876.1 uncharacterized protein E6C27_scaffold171G00910 [Cucumis melo var. makuwa] >TYK20827.1 uncharacterized protein E5676_scaffold291G00890 [Cucumis melo var. makuwa])

HSP 1 Score: 156 bits (394), Expect = 1.92e-47
Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 2  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
          G E KDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR LP  +AFYG
Sbjct: 11 GVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 70

Query: 62 AFIAGGIGAGMLVEIWINDKVK 83
          A IAGGIGAGMLVE+WINDK+K
Sbjct: 71 ACIAGGIGAGMLVEMWINDKIK 92

[Close]

BLAST of MC05g0445 vs. ExPASy TrEMBL
Match: A0A6J1FVE8 (uncharacterized protein LOC111447184 OS=Cucurbita moschata OX=3662 GN=LOC111447184 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 2.98e-49
Identity = 74/83 (89.16%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
          M EEAKDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFY
Sbjct: 1  MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLPSVLAFY 60

Query: 61 GAFIAGGIGAGMLVEIWINDKVK 83
          GA IAGGIGAGMLVEIWI DKVK
Sbjct: 61 GACIAGGIGAGMLVEIWIKDKVK 83

[Close]

BLAST of MC05g0445 vs. ExPASy TrEMBL
Match: A0A0A0L8I7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119440 PE=4 SV=1)

HSP 1 Score: 159 bits (402), Expect = 5.59e-49
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 2  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
          G E KDP KGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPS +AFYG
Sbjct: 11 GVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSVMAFYG 70

Query: 62 AFIAGGIGAGMLVEIWINDKVK 83
          A IAGGIGAGMLVEIWINDK+K
Sbjct: 71 ACIAGGIGAGMLVEIWINDKIK 92

[Close]

BLAST of MC05g0445 vs. ExPASy TrEMBL
Match: A0A6J1IJJ2 (uncharacterized protein LOC111475080 OS=Cucurbita maxima OX=3661 GN=LOC111475080 PE=4 SV=1)

HSP 1 Score: 156 bits (395), Expect = 4.96e-48
Identity = 73/83 (87.95%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 1  MGEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
          M EEAKDPFKGVDWKAVGGDMQKDPSS NI+KKRRPTK+RQIP+YYFLPRRSL S +AFY
Sbjct: 1  MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLSSVLAFY 60

Query: 61 GAFIAGGIGAGMLVEIWINDKVK 83
          GA IAGGIGAGMLVEIWI DKVK
Sbjct: 61 GACIAGGIGAGMLVEIWIKDKVK 83

[Close]

BLAST of MC05g0445 vs. ExPASy TrEMBL
Match: A0A5D3DB39 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00890 PE=4 SV=1)

HSP 1 Score: 156 bits (394), Expect = 9.28e-48
Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 2  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
          G E KDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR LP  +AFYG
Sbjct: 11 GVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 70

Query: 62 AFIAGGIGAGMLVEIWINDKVK 83
          A IAGGIGAGMLVE+WINDK+K
Sbjct: 71 ACIAGGIGAGMLVEMWINDKIK 92

[Close]

BLAST of MC05g0445 vs. ExPASy TrEMBL
Match: A0A1S3AV52 (uncharacterized protein LOC103483172 OS=Cucumis melo OX=3656 GN=LOC103483172 PE=4 SV=1)

HSP 1 Score: 156 bits (394), Expect = 9.28e-48
Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 2  GEEAKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
          G E KDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR LP  +AFYG
Sbjct: 11 GVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 70

Query: 62 AFIAGGIGAGMLVEIWINDKVK 83
          A IAGGIGAGMLVE+WINDK+K
Sbjct: 71 ACIAGGIGAGMLVEMWINDKIK 92

[Close]

BLAST of MC05g0445 vs. TAIR 10
Match: AT5G16950.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 1.0e-14
Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 3  EEAKDPFKGVDWKAVGGDMQKDPSSTNI-----IKKRRPTKIRQIPDYYFLPRRSLPSAI 62
          E AKDP+KG +W     +  K P+++ +      +K+ P  +    + YFLPR+  P A+
Sbjct: 4  EGAKDPWKGEEW-GTENEKTKKPTTSGVKTVTRARKQIPRGLEDKYEAYFLPRKPWPRAL 63

Query: 63 AFYGAFIAGGIGAGMLVEIWINDKVK 84
          A+YG+FI GGIGAGM++E WIN KVK
Sbjct: 64 AYYGSFILGGIGAGMVIEAWINKKVK 88

The following BLAST results are available for this feature:

BLAST of MC05g0445 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g0445 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522177.1	7.49e-50	90.36	uncharacterized protein LOC111786056 [Cucurbita pepo subsp. pepo]	[more]
XP_022942020.1	6.16e-49	89.16	uncharacterized protein LOC111447184 [Cucurbita moschata] >KAG6597065.1 hypothet...	[more]
XP_004133805.1	1.15e-48	91.46	uncharacterized protein LOC101207877 [Cucumis sativus] >KGN56411.1 hypothetical ...	[more]
XP_022975548.1	1.02e-47	87.95	uncharacterized protein LOC111475080 [Cucurbita maxima]	[more]
XP_008437869.1	1.92e-47	89.02	PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo] >KAA0048876.1 unc...	[more]

BLAST of MC05g0445 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVE8	2.98e-49	89.16	uncharacterized protein LOC111447184 OS=Cucurbita moschata OX=3662 GN=LOC1114471...	[more]
A0A0A0L8I7	5.59e-49	91.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119440 PE=4 SV=1	[more]
A0A6J1IJJ2	4.96e-48	87.95	uncharacterized protein LOC111475080 OS=Cucurbita maxima OX=3661 GN=LOC111475080...	[more]
A0A5D3DB39	9.28e-48	89.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AV52	9.28e-48	89.02	uncharacterized protein LOC103483172 OS=Cucumis melo OX=3656 GN=LOC103483172 PE=...	[more]

BLAST of MC05g0445 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16950.1	1.0e-14	44.19	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR36797:SF4	SUBFAMILY NOT NAMED	coord: 3..83
None	No IPR available	PANTHER	PTHR36797	OS01G0258600 PROTEIN	coord: 3..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0445.1	MC05g0445.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane