MC05g0390 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0390
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	U11/U12 small nuclear ribonucleoprotein 59 kDa protein
Location	MC05: 2932808 .. 2944631 (-)
RNA-Seq Expression	MC05g0390
Synteny	MC05g0390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAGTTGAAAGTTATTGATTAATAACTAAGTTGATAATATATATATTTTTGAAATAATCTCTCCTGCAATTGTTTTTTTTTTTTTTAATGATTTTTGTTTTGTTTTTAAGCATTCCTCCCATGGTTGCACTAGAAAAAAATTTTAAATTATCGAAGGAATTTTTGTACTATTAGATTATTGAAATTTTTTCATGTTTATTTAAAATAACCAAAGCAATTTTTTCTCTTGGGAATGCGTCTACTTGGTTAATCATAGAAAACAGAAAAATTCTCTTTTTAAACCCTAAACCAAAATTTTTATAACGATCTTTCTTCGAAGAACTCGTTAATCCATAATCCACAGAAAATTGGAAAACGACAGTTCGATTAACGAAAAAATTTTTCTTCGAGGCTTCAACTTCGAACTCCTTCAAGTTCTCAGACCATCGTTTGCCTCCCTTTTCTGTAAACTTCGTTCCATGTTCATAATCACTATCAAGCTTGTTACATCTTTCGACAGAATGCAGTTTCCACCAGTTAATTTTCGTATTCATGATGATCGTCTCGGCCAAAGACGACGGCATCTTTGTTCGCTGGTAAATGCTGCTCTAATCCAAGGACGAACTACTTCAACCTTTGAGTCTCTGTTGTCTCGATCTGGCTTGATGGCTTGAAGCTCTGGGGCAAATCATCTTTTGAGGAGTATTTCGATCTCATCATACGGTATCGACTCTGTTACACCATAGCTTGATGCTTCTGATAATATATTATGCACCCGATGCGCTGAAAGTCGATGAATTAACAAATCTGAAAATTGAATTTGGCATTGAATATCTGATGTGGTGAGAACTTTAGAACTGGAATTAGTGCAGTATCTTTGCATGATTAGTTATGATTCCTTTATTTAGGTTAGACGTTAGCAGTTTTAGCACATGATTAGCGAGCAGACATTTTCCTGATTTTGCTGAATGCTGAATTTGGAATTTTGTTTCCCTCTTTTAATCATGTTCTTGCTTTGCGTGGTTATTGTGTAGAACGTATATAAATTCTTCAAACATGATCCATATGAGGAGATAACAGCTTCAAAGTCTTCCTTTGCCATAATGGGAAATTATCAATATTAAGAGGTTTCATTCGATCTGCCCTCCCTTCCTAATCCTGGGGCGTATTCTCTGTTTACTCTTATTGTTCTGCATTCTCCTCTATAAATGGTCTAATCTGTCTGTTAGGCTCAGGTCACGTCAGTATGCGGGTCATGCTAGATCCAAATCTTTTTACTTGCACAATATTCAACTTATTTAGATTGAAACTTCTTTTTATAATGTGGAGCGGGCGTTTAGATTTACTAGCAGAAGGACTCTTGGTAATAGGGAAATGGAGGGGACCGGTTACTTTTTAATTCCTCTCAAGAGTTTTTGTTAGTTTGATTTTTATCTTTGAAATATATAGTATCCAATTTTAATCAACAAGCTGGTCCCCCCTGCCTAGAGTATACATTCATTTCCTTTTCATGAAATTGTTAAAAACGTACATACAGATTACAGTTTTGGGAATGAGATGAAACGAAGAAGTGAGTTGTATTGCTAGGACCCCTCAGAGTTTATATCATCGTGGATCTAATATTTGAAAATTTTTCTCAAATAGTTTCTAGTTTTTCATCCTCCTTTTCCCTGAACTACTTTTTAAATTTTGTGGAAGTTTTATATGAACAAGTAGAACCTTCTTATTAATCTTGCTTACACTATCTGTGCATGATGTACAAGTGGATAACATTTGTTTAACTGTCCAGAGATTCTATCTTACCTTGCTGGAACTAACTTTTTGTATATTATTGAGTTAGGAATAATGTTTGTTATAATAGTTTGTTTCTGCGAACTTACTATACTTAAAAGAGTTAATACGGCATATGAATTTAAGAAAACCTCATTCTGTGCAAGATACACTTCTCCACCTCTTTCTAGTTTTATTCAAAGCATATAGATTCCGATTTACCTAATCATCTTGCAACTTCAGTTTTTCTGCTAAAGGTGCTGGTCTTTACAATTGGATTTATTAGATTTTTATTTTCTTTCTTGTTTCTCCCATATTTCTTGAATACGTTTAGAACCACGTGTCTCTCGAATTTAGTTAAATTTCTAAAGGAAAAAGGTTATCTCAAAATCTTTGTCTTTATTTAAATTAGATCAAGTCAGCACCTATCTCTACCTATCTCTCTGTGTTGACCGCTCTTGAAAAATTGGTAGCTTATCGTTTGTTTGTTTGTTTTTTTTTAATTTTCTATTTTTACATTTCTTTATTGTTAACAACTTAATGGTGCTCAACACCTAAGTATGTTCCTTTAAATTAGGCCAAGATCAATTCAGAGTTTAAGTCTTTGTTTAGCTTTTTAGTTCATATGTTGTATTGGTGTATGCTTTCAATATGAAATTGGAATTCACAATGGTAAAAATTTTAATGTCTATGTTTTCTATGTGAAGTAATAACATCCTATTTTCTATTGACTTCACAGAATAATGCAGTACTTGTATAGAGTGTTTCCTTTTTCCTGATGACTAGATTTGGATTAAGTGGTTCACTGCACGAGATATGCTTGCCATTTAGAAAGGCACTTTTAGTCCTTAGTGTACTTTGTACATTTTTAGTTAGCTAGATTGTTAAATTCTTAAGAATCTTGAAATTTTACTTGTGAAAAATAAAATTAGAGGTTTTTAAAAACAAAGTATGTGCTTGTTTTATAAGTGAACTAGGAAAAAAAAACTCCCATTGTCATGAGTTTTCTATGAGGAAGTGGTAGTCAAATTGCAAATTGAAGACTGAAAAATATAGATCATATAAAGAACTAGCAAACATATTGTCAGCATTTTTCTTGGGGGGGAGGGGGAGGGGGGCTGGTTCCTTGTGTCTCTTGTTTGACCTTAATGGAATAGACAAAATATCCTCTGGTGACCACCATCATGTTTAGTCATTACATTGAGGTATGGATCACGTGGTCTTGTCGCCGAAAAATATATATAATTGTTTTCTTCATCGTTGTTACGTCCATGAATTGCAAACAACCATGGACGACTCCCGACCTCTAGCAGTTGAGAGCTTTTCCGCCAGTTGGCTGTCGAATGTGAAGCAGTCCTATGATGCCACATCCAAAATGATGGATTACAAGATCGTTAAGCCTTCAAGGTTTCTGGATGAAACCCAGAACTTCAAATTCAATACTCCAATCCATCCATCTGTTCTCATAGCCCATGCTGATGAACTTTTCTTTGATGGCTCTATCAGACCTGTTTATATAAGTCACGCAACATTGGAAGCCTCTGATACATCTGATTTTGTTCCAGTCTTGCACAATTCTTCACTTGCTTCTTTAAATTTGAGTCCAGCCATACAAAACCGATCTTGTCATTCTGGAAGATGGAGAAGATCCTTGTGTATGTTACAGAAGTATTTAGGATGTCTCAGTCCCATTTGTCATAAAGGACACCCAGGCGATATTACCTGGGTTGATGATATTAAACATAAATCCCGTGATGTTAAGAGCCGGCACCATTCCCCTCGAGTATCTCCACAAAGAAACAGTAGTTCTTCATCAGGTGATTGGTGTCATCTAGAGAGCTCAATTTATGAAGCAATACTTCACTGCAAAAAGTCAATAGGTGTGTTACACGTGTTTTTCTTTTATGTTTGGTTAATCTCCACTTCTTCAATACATAGTATTCTCATTCTCTTCTTGTTTTAGGGGAATGATATCCTGAACCAGAAGAAAAGGGCAATGGAAATTGGAAGGATAAAATACCAGACTTCTGGAAGGGTTCCCGCATGGCAATTTGTTCTTTGTCCTCTTTTTCTTTGGCAACATCCCTTTTCACTTCAATGTCTGAAGAGAGATTATATTTTTTTGGTCCTGTGAGGATGAAAGACAAGTATTCGATCTAAGATGTGTTTCTTGATGCTCTACTTGTTTGTTATGCTGTATACCGTAGAGGAGTGAGAGAAACGAGTCTTTATTTAAGAAAAAACAGGGAATTTGTTTTATACAGAATAGGTATAAGAGGAATGCCTGTACATTCAGCATTGTGCGTTTTCAAATGTACACATCCAACTTTTCTGATTGTTAAGGAAAACTCTGTATTTACTTCTTTTGATTTGCGATACAATTCAATGGACATTCAGATTGTTGTAGCAGTTGGACTCATTTCTTCACATATCTGATATCCATATGTGTTCAATGACATGCTTCGGCTAGTCTCTGGCTTAGTAAATCTTTAGTTTTCTATCCCAATTTCCATTGATGGAACCCAGACGGAAAACTACCATTTCTGTCTCTAGAGATAGAAAGAGGGAGAGAGAGTAATGTTAAGCTGGTTACAAGTAGGACATGGACAAAGTCTGTTAGTAGAAAATCCACGAAGATTAACTCTCACTCCTTCCCTTTTGTTGTTTTCCTTTTTGTTCAGCTTATCATTGATATTTATAGTGGAGTTCCCCCAATAAAAAAAAAAAGGAAACAGAGAGAGAAAAAAGATGAAAATAGTGCTCATCATCGTAACCTTTCACGTATTTCAAACACAATCAAAATCTGTGAATCCTCTGCTGAGGGGACCAACCTAATTCTTATCTTCACTGCTGGTTATGACCTTTGCCCATTGCCAGGGGTCACATGGATATGCTATCATCACCAAAATCCATTGAACCTTTATCCTGAATTTGTTAGCCTTTGTTTATATTATATGAATATTTTATGGTAGAACTGAATGAATCAAAATTTAGAACTTAATTGTCCACTAAGCACTGAAAAGCGTCCTCCATAACAAGTTCATAAAAAATCTTCTGAAAACATATGTTAAATATTACACTGTTACAAATTCTTGTGTGGAGGATGTAGATTGGTGGAGCTTATTAGGAACTGGTAGTTTGGACTTCTGCCACGAGGCACAAACTACGAAATTAGATTAGATTAAATTGTATGTAGGTAGTTGAGCACAGCACAGAGACGAGAAAAATTTAGGAAAATGCCATTGAAGAGTTTCAAATGTGATGGGTTTTTCCCCGTGAAGAGTGAAAGGATACACTCTAATACAGAATCATCTCTTTATGGAAAACATTAGTTCCTTCATTGTTTGAACAAAGACAAGTGGGAGTTCTAGTGATTTGAATAGAATTAAACGAGAATCAACTCAACTAGGTGGCCAGTTTGTAGGGCTCATTCTTTATTATTGTAGTTTATGAACTCAACTAAGGTTACTCTAACTCAAGCCAGAATCGATGTCATCCACTCTCAAATTTTGTTATTTTGCATCAAATAGAGATGTTTCATATTTCATCAAGTTTCATCCGAAAGAGGCTGTCATTATTCTCTCTTCAAAGTTTAGTTCTAAAAGAGAGAAGAGGAAAAAGAAAAGCCCCACCAAACAAGGCTCAACCATCACCGAGAACGCGTAGCATATCAATATGAATCATCTCTATCTGATGCAAAATAACAAAATTTGAAACTATTGAGTCGTACGTACAAAACCAAAAGAAAACAAGGTAGAAAGAAGAAGCATTCCCCACCACACAAGGCATTTGGGAAGGTGGGGGGACCAAAGACATTGATATGGGAGGCAGTCGCTGTTGTTGCCACTGATGCGGCGGGCAGATGCCTAAGATTTCACTCTCTTCAGATTCCCAAATGCCATTTTTAGAAGTTGGGATACACTGTTTCCCTTAGACATTGAACCTTCCAGTTAATTAGAGCATCAGAAGCAGCCAAAGCCAAAGGAGGTTGGGTATGGGATTCTAACTTCATAATTTCCTTTGACAGACTGCACCACATGCCCATTTCTAATGGAATTGGGGACCAAACTGGCTAAGTTCTGTCTCTGGTTTATCCTCAAGATCAGATCATACCAAGTTACTTTGTCCACCTTCTGACTACGATCGAAATCAAATGGGTTCGTATCTTTTTCTTCAAGCATAATCCTCTTTTCATATCTGTATGTTTTAATAATGATTTCTCAGTTTTTTTTTTTTAGATTCATCTGAAGGAATTTCGAGCCGAGCTAAGAAATGACCATTAGAGGACACCCATCGTTAATACTTAGGAAAAGATGTTCCCAAGGACTTAAACCATCTATGAAATAGAGGGGTTTGTTTTTTCTTTGGGGCCCAACCTAAACGGGGTGGGGATGAGAGGATCTCCGTCTAGGTTCTCCATCCCGCCCTGTTAAATATATATTAAAGAAGTTCTAAGGTAAAAGAGGATTCATCCTTGAGAATTAAACGTTTAATTAGAAATTCCTTTTTAAAAAATTATTTGATTGGATTTCGGTTTTCGTGAATTTCTGCCGAAATTTTGTGAGGACGAGTAATTAAATGGAGACGGGGACGGGCTGGCCCCACTCCGTGAAACACCCATACTATGAACTGGTAAACAATGGATAAAGGTAAATCACATGGATTATAATTTGAATGATTTCTTTTTTTTTTTCAATGCTCTCGTGGATATCTAAAAATTATTTCGTAGTTTTTTGTTTGTTGATTACCTTAAGTGAAGAGAACTAGAAATTCATTTGACAATGATAAATTTGTTTCTCTTCAATTTTGAAGGGAAAAAAATGAGATCCGTTAAATTTTCCAAAGTTAGAACTTGTGTTAATATACATATTATAGATGGAATGACAAAAACTATATATTATGTTTGTAACAGTCTATTTTCAATTTTATAAAAGTAATAGCATACCACGCTATAATTAAAGATTCCGTGGGTAATTGGTGTAATTTCGTTCAACAAAATTGGCAGGGAATCGAATTTGTGTGCTCAGTATTCCTGGTTAGATTTATTGGCTTAACATGATTTATCCTTTATTTAGTGAAGTTTTATTTTTTAAAAGATGCCATGAGTTTAGTTAAACGGTTAAGGAATCTCCCATCCTTACCCTTGGAAAAAAAAATATTTTTGTAAATATTTGGCTTACGTTTCAGATTGCTTTTCCTAAAGCAAAATACGCGTTACACATTGTAGAACGTTAATCACTAAGGTCCTGTTTACCTACCAGGAATTGAAATTGGAATGAATCAGAATGAAATCGCAAGGGAATGAGAATGAAAGAATGTGAATCAATTTTTCATTTCCTTTGATAGTGTTTATCAAATTTTAGGATGAGAATCAAGTGGTGGGGCTTATCCACTTTTTTTATTCTCATTCCCTGAAAAGAGAACTTACATATTTATTGCAATCACTTTTTTACCTTTACCTTTTCTCTCTCCTGATTAATGAAACTCGTACCTTTTTATTTAATTGTTTTATACTTTTTTCATTTATACTACTAATAATTTTTCTTTTAGTAAAAATTTATATCACTTTTATTAGTGATGTAATTTTATTATAAAATATTATAAATTTATATATAATATTTTAATTATATTTTGTTATTATTAATTAATATCATATTTTTTAAATATAACTTATTATTATTAATTATTATAATAATAAAATTTAATAATATCTTATATTAAATTTAATAGTATTTGAGTGGATTTATTATTTATTAATATTAATATTAAATAAATTGTTATGGTAAAAAAATTATTATCAATAGTATAATAATAAAATATATTATTATTATAATTAAAAATTAGCACGATAATGTATTTGTAATTAATTAGAAGGAAAAGGGTATATTAGTAATTTTCATTCCGATTCTATTCCTATTTGCTTAATCACTCATGAATCTTATATTTTGAGTTTGACACTCGTCTTCCCTTTTGGGCTAGACCGACGCCCAACAACTCGGTGGGCTTTGATATTAGCCCATTAAAGAACAAAGCCCAAGCATATGCAACGTGTCATCAATTCGTAAGCCCAAATTATATCGGAAATAATAAGTTTTTTTCCTTTTTCTTAGTTCAGTTTTTCCTCACCATCAAACACTTTACTTGAAATCGAATGAAATTCACAGATAATTTTTGAAGAAGTAGAAATTAAATTCACTGGTATCGTGCCGGAGCTGAAGCATCTTTAAGTTTCAGAAAAATTCGGAGGTTCGATTTGCTTCCTGCTTCGTCTCACGTTTCGTAATCTTGTTGACAGTTCTTTTTAAAATTTTTTTTTTCCCATTGATGGTGCAGTGATTATTGCTTTTGGCAGCAATGAATTCGGTTCCGCACCAGTTTGCGGCTCAACCTCCGTGGTTCTCGATGCCGCCGCCGTCTTGTGCATCTTTCTGGAATAACCTCAACGTGCGTGATCGTCTAAGGGATTTGCAAGAAACGCTGGATCTCGCAAAGTCGATGTATGTATTTGTGCGTAATTTGTGGAAAACTACGTCGCAGTTAATGGTGTTTTTTTTTCTTTGCTGTTTTGCTCTAGCTTTGAAATGCTCTTGTTCGAAGTTGTGATTGAAGTGTTAATATTGATAGGCAGAAAGAACTTGAGATGTTGATGATATTTAAAGATGGCAAATCGTCCGAGCAGAGTGCGGTTAGTGTGCCTAACGACAGTGAGTTTTCTGAGTACTTGGAAGATAGAAGGATTAATTTGGAGTTGCAAGAATCGCGTTCGGTTGAAGCTGTGGTTGCTTTGATGAGAAAGTTGAGAGCTCAGCTTCATCCATTTAGGATGGTCTATGACGAATCGAGTCCATGGCAAGAAAAAAACGCTGCAGTTAGGTTATCTACTAAATTATTGAAGGCCAAGAGAAATAAGCTGTGGAGAAAGAGGAAGAGGAAGCGCATTGCTGAATCACTTGCAAAGGTAGTGTTTAGGTCATTTGTATTCCAATTTGTCTTACAATTTTTACCACAATGTTAGTTTTCTTTACCTTTTTATTGTGGCAACTTAGGAACGTGGAAGTTTTGACCTAGTTGATCGAGAGGCTGATGAATGGAGGGCCAGGGAGATCGCCAAGGATATTGCAAAACGCAAGGTGCTGGAATATTTACCTGTTTCAACTGTTTTTTTTGGCTAAGAATTCTACATTGTTTTCCTTTGTTTTTTTGTTTTTTTGTTTCGTTCTTTTTTTTATTCTTTCAAAATCAGAATTAGTAACCAACCATTTAATGATGAATCTTGAAGTTTGTTCTTCATGTTTTGCACTTGATTACTATTGTATTTCTGCTTGTCTAGCTCTGGACTATTGAACATCAGCCCAAAGGATATTAACAGAAAAGTGTTTATTGTTGATGAGTAATTAATCCATACAATGAAATTGGTGAATGGTTTCAGGTGGAGAAGATGAAAGAAATTGCAAGAGTTAAAGCAAAAGAGGAGAAGAAGAGGATAGATTCTGAGGTGACAATCAATAGTATTAGAACTATTCATGCTACCTTTCTATCCCTTCTTTTATGAATTTCTAGCTAATGTCAGATATTATGTAGCTTGAACTAGCACTAATAGTGGAAAAGTTGCAAGAACTTCGCTCTATCAGGATCCAAAAATTGAAGAAACAAGGTTCGATTTCTTACTTCTCATCCTCTTTTTCCTATTCTAATAACCATTATTAAATATCATTCTTGACATGCAGATGGTTTTTTTTGTTGTTTTAGTAGATTTGTTACCTAGTGCAGTCTCATTCTTTTTGGTTGGCACTATGTTAGAGTTTATGAGTACCATGGATAGAAGAACTAAATCTAAATTATTTCTGGGAAAAAAAAAACAAACAAATGGAAGCCGTAGTTGCATAGAAACAAGAACCATTTCCCAACGAATGAAAATAAATGGAGTTGTTGTAAGTAATAGTCTCATACTTTCTAATATAAGACATGATCCCAACATCACATGGAATGCCTAACTTACTTGTGAACACCCTGTTTACGAGATTCTTTTCTGTAAATGGTGGTAAGCTATACAAAGTTATGGTTAGTTGGTTACACTTACAGCCTCATGACAGTAGGGGTTGGCGATATATTTCTCCAGGTCATTTTCTACCTGAGGAGGATGATAAGTTTCTGGAGAAGGTTCGAGCTGCAGTTGAGGAAGAGGAACGTCAAGCCCTTGCTGCAGCTGATACGGATGCTGCCAGGGATGCCATTGCAACTGCAGAAGTGTCTAGGAAGACCATTCCAAGTTACAATCCTGAATCAAAAGATCCAAATAGTAATGCAGAAAGGCTCGAAGAAAGAAATGATCAAAGAACTGCGAGTGCAGATGATAAGGTCTCTAACATCAGCACTGATAAGGAACCTGGGAAACAGTTTGGAGAAGGACAAGGTTGTGGAAGAGTGTATGATTATGCGGCCAATTTACCAATGGAATTCTATCATTATTATTATGGAAGTAACACTGATATGGGGACATTAATTGAGGTAATTGAAGTAATTTTCCTAAGCTTTTCACTTATTGCAGAATCTTGTGGAAAAAATTTCGTCATCTGCATGCAGTAGATGTATATTCTGTTTGCAAGACAGAGCATTTCTCAGAGTATCTCCTCTAGCATTTTTGATAAATGTACATTTTGATTAATTTTCCTTAAAAAAAAAAATTACAGTATCTACATTGGTACTTGTTTTGTGCAAATGAGTGAGCTTTATAAGTATGAGTCACATGTAGTTTGTAGGGTTTGCATTTCTGAAAGATATTATGTGTCCTGAGAGATTTGTGAGCGATGGGTGAAAGCTGGTGTAGTTTTATTGTTTTATTTCATGGGAACATACTAAACGTAGGCCCAAAGCTAAAGCATGAAGTCCAAAACTTTTACTCGAATTCCTTTGGTGTATTCTGTAGAACCTGAACTAACATTTTAAAGAAGTGTTTGTGTGATACTGAACAACATTCCTCTACGATCTGCTAATTGTTCTTAAAACAACCATTAACACACGGTTTTTGAATTACATCTGTTATGACTTTCGATGCAGGTTAGAAGATCGTGGGATGCATACATAAGACCTGGAGGAAGGTAAGATACCATTCTTTCACTCTAGTTATTCCACTTTTCAAGTATTGTAGTCTTCATAGGAAAACTGGTGATTTGATGGAAGTTACTAACACCTTACAAAAACATATTTGAACTTCCACGAGTACATCATAAATTTACAACAAAAACCACCATACTAGTACTTAGGAATAGCTTCAACTGTGCTCATTTCAGTAAACCTCACGATATCTCTACAGTTGCTTCTAGTTTCTGCTTATTCATACATCCGTTCATATTTGTATATATATTCCAATGAATTCATAGCCTGGAAAGGTGGGAGAGTTATGTTAAATGAATTTTGCTACGGGATTTTGTGCAGCCGAATACCGGGACATTGGGTTCAACCACCACCACCTGCTGATGAAATATGGGCAGCATATTTGGTGCGACCAAAATGAATCCAGCCAGCCATACGGTACAGAATTGGTTTTTCAAAATTTGCTGGTACAGATTGGTACAAAATGCAAATACATAAATAACAAGCTTATTTTGGATGGCATGGCATCGGTATGTGGTTCTGTGATTATATGCGAAAATTGATATACCTTTGCAGTTGTTTTGGTAAAAGATCAATCGTTAAATTTCCTATCTGTTGATCAAAATGTCGTGAAAATTCAGTTGAGTTCATTGTGTCGGGTGAGGAATTGTAACAAGTTTTACAAGATAGTTCAGCATTGTGAAGGCATACGAGGGAGTAAGAGGCGGCATTTTTGAGCTGAAGAAGGTTTGATGATGATTTATTTTTGGTTTCTAATCTTTACCATTGTTAATGGAAGTTTAGAAAGCGGGTACCATTCATCATGAACATGTAAATAGAAATTTTGGATACTGCATCTTCATGGACGTACGGTTTTAAGAACCCTATTCACTTTCGTTTGAAATTGTTATAGGCTTCTGTCTTTTGTTCTTGTATATTAATGCTTTTGATAATTTATTAATATTTTCATTCTTTAAAAT

mRNA sequence

GAAAAGTTGAAAGTTATTGATTAATAACTAAGTTGATAATATATATATTTTTGAAATAATCTCTCCTGCAATTGTTTTTTTTTTTTTTAATGATTTTTGTTTTGTTTTTAAGCATTCCTCCCATGGTTGCACTAGAAAAAAATTTTAAATTATCGAAGGAATTTTTGTACTATTAGATTATTGAAATTTTTTCATGTTTATTTAAAATAACCAAAGCAATTTTTTCTCTTGGGAATGCGTCTACTTGGTTAATCATAGAAAACAGAAAAATTCTCTTTTTAAACCCTAAACCAAAATTTTTATAACGATCTTTCTTCGAAGAACTCGTTAATCCATAATCCACAGAAAATTGGAAAACGACAGTTCGATTAACGAAAAAATTTTTCTTCGAGGCTTCAACTTCGAACTCCTTCAAGTTCTCAGACCATCGTTTGCCTCCCTTTTCTGTAAACTTCGTTCCATGTTCATAATCACTATCAAGCTTGTTACATCTTTCGACAGAATGCAGTTTCCACCAGTTAATTTTCGTATTCATGATGATCGTCTCGGCCAAAGACGACGGCATCTTTGTTCGCTGGTAAATGCTGCTCTAATCCAAGGACGAACTACTTCAACCTTTGAGTCTCTGTTGTCTCGATCTGGCTTGATGGCTTGAAGCTCTGGGGCAAATCATCTTTTGAGGAGTATTTCGATCTCATCATACGGTATCGACTCTGTTACACCATAGCTTGATGCTTCTGATAATATATTATGCACCCGATGCGCTGAAAGTCGATGAATTAACAAATCTGAAAATTGAATTTGGCATTGAATATCTGATGTGGTGAGAACTTTAGAACTGGAATTAGTGCAGTATCTTTGCATGATTAGTTATGATTCCTTTATTTAGGTTAGACGTTAGCAGTTTTAGCACATGATTAGCGAGCAGACATTTTCCTGATTTTGCTGAATGCTGAATTTGGAATTTTGTTTCCCTCTTTTAATCATGTTCTTGCTTTGCGTGGTTATTGTGTAGAACGTATATAAATTCTTCAAACATGATCCATATGAGGAGATAACAGCTTCAAAGTCTTCCTTTGCCATAATGGGAAATTATCAATATTAAGAGGTTTCATTCGATCTGCCCTCCCTTCCTAATCCTGGGGCGTATTCTCTGTTTACTCTTATTGTTCTGCATTCTCCTCTATAAATGGTCTAATCTGTCTGTTAGGCTCAGGTCACGTCAGTATGCGGGTCATGCTAGATCCAAATCTTTTTACTTGCACAATATTCAACTTATTTAGATTGAAACTTCTTTTTATAATGTGGAGCGGGCGTTTAGATTTACTAGCAGAAGGACTCTTGGTAATAGGGAAATGGAGGGGACCGGTTACTTTTTAATTCCTCTCAAGAGTTTTTGTTAGTTTGATTTTTATCTTTGAAATATATAGTATCCAATTTTAATCAACAAGCTGGTCCCCCCTGCCTAGAGTATACATTCATTTCCTTTTCATGAAATTGTTAAAAACGTACATACAGATTACAGTTTTGGGAATGAGATGAAACGAAGAAGTGAGTTGTATTGCTAGGACCCCTCAGAGTTTATATCATCGTGGATCTAATATTTGAAAATTTTTCTCAAATAGTTTCTAGTTTTTCATCCTCCTTTTCCCTGAACTACTTTTTAAATTTTGTGGAAGTTTTATATGAACAAGTAGAACCTTCTTATTAATCTTGCTTACACTATCTGTGCATGATGTACAAGTGGATAACATTTGTTTAACTGTCCAGAGATTCTATCTTACCTTGCTGGAACTAACTTTTTGTATATTATTGAGTTAGGAATAATGTTTGTTATAATAGTTTGTTTCTGCGAACTTACTATACTTAAAAGAGTTAATACGGCATATGAATTTAAGAAAACCTCATTCTGTGCAAGATACACTTCTCCACCTCTTTCTAGTTTTATTCAAAGCATATAGATTCCGATTTACCTAATCATCTTGCAACTTCAGTTTTTCTGCTAAAGGTGCTGGTCTTTACAATTGGATTTATTAGATTTTTATTTTCTTTCTTGTTTCTCCCATATTTCTTGAATACGTTTAGAACCACGTGTCTCTCGAATTTAGTTAAATTTCTAAAGGAAAAAGGTTATCTCAAAATCTTTGTCTTTATTTAAATTAGATCAAGTCAGCACCTATCTCTACCTATCTCTCTGTGTTGACCGCTCTTGAAAAATTGGTAGCTTATCGTTTGTTTGTTTGTTTTTTTTTAATTTTCTATTTTTACATTTCTTTATTGTTAACAACTTAATGGTGCTCAACACCTAAGTATGTTCCTTTAAATTAGGCCAAGATCAATTCAGAGTTTAAGTCTTTGTTTAGCTTTTTAGTTCATATGTTGTATTGGTGTATGCTTTCAATATGAAATTGGAATTCACAATGGTAAAAATTTTAATGTCTATGTTTTCTATGTGAAGTAATAACATCCTATTTTCTATTGACTTCACAGAATAATGCAGTACTTGTATAGAGTGTTTCCTTTTTCCTGATGACTAGATTTGGATTAAGTGGTTCACTGCACGAGATATGCTTGCCATTTAGAAAGGCACTTTTAGTCCTTAGTGTACTTTGTACATTTTTAGTTAGCTAGATTGTTAAATTCTTAAGAATCTTGAAATTTTACTTGTGAAAAATAAAATTAGAGGTTTTTAAAAACAAAGTATGTGCTTGTTTTATAAGTGAACTAGGAAAAAAAAACTCCCATTGTCATGAGTTTTCTATGAGGAAGTGGTAGTCAAATTGCAAATTGAAGACTGAAAAATATAGATCATATAAAGAACTAGCAAACATATTGTCAGCATTTTTCTTGGGGGGGAGGGGGAGGGGGGCTGGTTCCTTGTGTCTCTTGTTTGACCTTAATGGAATAGACAAAATATCCTCTGGTGACCACCATCATGTTTAGTCATTACATTGAGGTATGGATCACGTGGTCTTGTCGCCGAAAAATATATATAATTGTTTTCTTCATCGTTGTTACGTCCATGAATTGCAAACAACCATGGACGACTCCCGACCTCTAGCAGTTGAGAGCTTTTCCGCCAGTTGGCTGTCGAATGTGAAGCAGTCCTATGATGCCACATCCAAAATGATGGATTACAAGATCGTTAAGCCTTCAAGGTTTCTGGATGAAACCCAGAACTTCAAATTCAATACTCCAATCCATCCATCTGTTCTCATAGCCCATGCTGATGAACTTTTCTTTGATGGCTCTATCAGACCTGTTTATATAAGTCACGCAACATTGGAAGCCTCTGATACATCTGATTTTGTTCCAGTCTTGCACAATTCTTCACTTGCTTCTTTAAATTTGAGTCCAGCCATACAAAACCGATCTTGTCATTCTGGAAGATGGAGAAGATCCTTGTGTATGTTACAGAAGTATTTAGGATGTCTCAGTCCCATTTGTCATAAAGGACACCCAGGCGATATTACCTGGGTTGATGATATTAAACATAAATCCCGTGATGTTAAGAGCCGGCACCATTCCCCTCGAGTATCTCCACAAAGAAACAGTAGTTCTTCATCAGGTGATTGGTGTCATCTAGAGAGCTCAATTTATGAAGCAATACTTCACTGCAAAAAGTCAATAGGGGAATGATATCCTGAACCAGAAGAAAAGGGCAATGGAAATTGGAAGGATAAAATACCAGACTTCTGGAAGGGTTCCCGCATGGCAATTTGTTCTTTGTCCTCTTTTTCTTTGGCAACATCCCTTTTCACTTCAATGTCTGAAGAGAGATTATATTTTTTTGGTCCTGTGAGGATGAAAGACAAGTATTCGATCTAAGATGTGTTTCTTGATGCTCTACTTGTTTGTTATGCTGTATACCGTAGAGGAGTGAGAGAAACGAGTCTTTATTTAAGAAAAAACAGGGAATTTGTTTTATACAGAATAGGTATAAGAGGAATGCCTGTACATTCAGCATTGTGCGTTTTCAAATGTACACATCCAACTTTTCTGATTGTTAAGGAAAACTCTGTATTTACTTCTTTTGATTTGCGATACAATTCAATGGACATTCAGATTGTTGTAGCAGTTGGACTCATTTCTTCACATATCTGATATCCATATGTGTTCAATGACATGCTTCGGCTAGTCTCTGGCTTAGTAAATCTTTAGTTTTCTATCCCAATTTCCATTGATGGAACCCAGACGGAAAACTACCATTTCTGTCTCTAGAGATAGAAAGAGGGAGAGAGAGTAATGTTAAGCTGGTTACAAGTAGGACATGGACAAAGTCTGTTAGTAGAAAATCCACGAAGATTAACTCTCACTCCTTCCCTTTTGTTGTTTTCCTTTTTGTTCAGCTTATCATTGATATTTATAGTGGAGTTCCCCCAATAAAAAAAAAAAGGAAACAGAGAGAGAAAAAAGATGAAAATAGTGCTCATCATCGTAACCTTTCACGTATTTCAAACACAATCAAAATCTGTGAATCCTCTGCTGAGGGGACCAACCTAATTCTTATCTTCACTGCTGGTTATGACCTTTGCCCATTGCCAGGGGTCACATGGATATGCTATCATCACCAAAATCCATTGAACCTTTATCCTGAATTTGTTAGCCTTTGTTTATATTATATGAATATTTTATGGTAGAACTGAATGAATCAAAATTTAGAACTTAATTGTCCACTAAGCACTGAAAAGCGTCCTCCATAACAAGTTCATAAAAAATCTTCTGAAAACATATGTTAAATATTACACTGTTACAAATTCTTGTGTGGAGGATGTAGATTGGTGGAGCTTATTAGGAACTGGTAGTTTGGACTTCTGCCACGAGGCACAAACTACGAAATTAGATTAGATTAAATTGTATGTAGGTAGTTGAGCACAGCACAGAGACGAGAAAAATTTAGGAAAATGCCATTGAAGAGTTTCAAATGTGATGGGTTTTTCCCCGTGAAGAGTGAAAGGATACACTCTAATACAGAATCATCTCTTTATGGAAAACATTAGTTCCTTCATTGTTTGAACAAAGACAAGTGGGAGTTCTAGTGATTTGAATAGAATTAAACGAGAATCAACTCAACTAGGTGGCCAGTTTGTAGGGCTCATTCTTTATTATTGTAGTTTATGAACTCAACTAAGGTTACTCTAACTCAAGCCAGAATCGATGTCATCCACTCTCAAATTTTGTTATTTTGCATCAAATAGAGATGTTTCATATTTCATCAAGTTTCATCCGAAAGAGGCTGTCATTATTCTCTCTTCAAAGTTTAGTTCTAAAAGAGAGAAGAGGAAAAAGAAAAGCCCCACCAAACAAGGCTCAACCATCACCGAGAACGCGTAGCATATCAATATGAATCATCTCTATCTGATGCAAAATAACAAAATTTGAAACTATTGAGTCGTACGTACAAAACCAAAAGAAAACAAGGTAGAAAGAAGAAGCATTCCCCACCACACAAGGCATTTGGGAAGGTGGGGGGACCAAAGACATTGATATGGGAGGCAGTCGCTGTTGTTGCCACTGATGCGGCGGGCAGATGCCTAAGATTTCACTCTCTTCAGATTCCCAAATGCCATTTTTAGAAGTTGGGATACACTGTTTCCCTTAGACATTGAACCTTCCAGTTAATTAGAGCATCAGAAGCAGCCAAAGCCAAAGGAGGTTGGGTATGGGATTCTAACTTCATAATTTCCTTTGACAGACTGCACCACATGCCCATTTCTAATGGAATTGGGGACCAAACTGGCTAAGTTCTGTCTCTGGTTTATCCTCAAGATCAGATCATACCAAGTTACTTTGTCCACCTTCTGACTACGATCGAAATCAAATGGATTCATCTGAAGGAATTTCGAGCCGAGCTAAGAAATGACCATTAGAGGACACCCATCGTTAATACTTAGGAAAAGATGTTCCCAAGGACTTAAACCATCTATGAAATAGAGGGGTTTGTTTTTTCTTTGGGGCCCAACCTAAACGGGGTGGGGATGAGAGGATCTCCGTCTAGGTTCTCCATCCCGCCCTGTTAAATATATATTAAAGAAGTTCTAAGGTAAAAGAGGATTCATCCTTGAGAATTAAACGTTTAATTAGAAATTCCTTTTTAAAAAATTATTTGATTGGATTTCGGTTTTCGTGAATTTCTGCCGAAATTTTGTGAGGACGAGTAATTAAATGGAGACGGGGACGGGCTGGCCCCACTCCGTGAAACACCCATACTATGAACTGGTAAACAATGGATAAAGACCGACGCCCAACAACTCGGTGGGCTTTGATATTAGCCCATTAAAGAACAAAGCCCAAGCATATGCAACGTGTCATCAATTCGTAAGCCCAAATTATATCGGAAATAATAAGTTTTTTTCCTTTTTCTTAGTTCAGTTTTTCCTCACCATCAAACACTTTACTTGAAATCGAATGAAATTCACAGATAATTTTTGAAGAAGTAGAAATTAAATTCACTGGTATCGTGCCGGAGCTGAAGCATCTTTAAGTTTCAGAAAAATTCGGAGTGATTATTGCTTTTGGCAGCAATGAATTCGGTTCCGCACCAGTTTGCGGCTCAACCTCCGTGGTTCTCGATGCCGCCGCCGTCTTGTGCATCTTTCTGGAATAACCTCAACGTGCGTGATCGTCTAAGGGATTTGCAAGAAACGCTGGATCTCGCAAAGTCGATGCAGAAAGAACTTGAGATGTTGATGATATTTAAAGATGGCAAATCGTCCGAGCAGAGTGCGGTTAGTGTGCCTAACGACAGTGAGTTTTCTGAGTACTTGGAAGATAGAAGGATTAATTTGGAGTTGCAAGAATCGCGTTCGGTTGAAGCTGTGGTTGCTTTGATGAGAAAGTTGAGAGCTCAGCTTCATCCATTTAGGATGGTCTATGACGAATCGAGTCCATGGCAAGAAAAAAACGCTGCAGTTAGGTTATCTACTAAATTATTGAAGGCCAAGAGAAATAAGCTGTGGAGAAAGAGGAAGAGGAAGCGCATTGCTGAATCACTTGCAAAGGAACGTGGAAGTTTTGACCTAGTTGATCGAGAGGCTGATGAATGGAGGGCCAGGGAGATCGCCAAGGATATTGCAAAACGCAAGGTGGAGAAGATGAAAGAAATTGCAAGAGTTAAAGCAAAAGAGGAGAAGAAGAGGATAGATTCTGAGCTTGAACTAGCACTAATAGTGGAAAAGTTGCAAGAACTTCGCTCTATCAGGATCCAAAAATTGAAGAAACAAGGTCATTTTCTACCTGAGGAGGATGATAAGTTTCTGGAGAAGGTTCGAGCTGCAGTTGAGGAAGAGGAACGTCAAGCCCTTGCTGCAGCTGATACGGATGCTGCCAGGGATGCCATTGCAACTGCAGAAGTGTCTAGGAAGACCATTCCAAGTTACAATCCTGAATCAAAAGATCCAAATAGTAATGCAGAAAGGCTCGAAGAAAGAAATGATCAAAGAACTGCGAGTGCAGATGATAAGGTCTCTAACATCAGCACTGATAAGGAACCTGGGAAACAGTTTGGAGAAGGACAAGGTTGTGGAAGAGTGTATGATTATGCGGCCAATTTACCAATGGAATTCTATCATTATTATTATGGAAGTAACACTGATATGGGGACATTAATTGAGGTTAGAAGATCGTGGGATGCATACATAAGACCTGGAGGAAGCCGAATACCGGGACATTGGGTTCAACCACCACCACCTGCTGATGAAATATGGGCAGCATATTTGGTGCGACCAAAATGAATCCAGCCAGCCATACGGTACAGAATTGGTTTTTCAAAATTTGCTGGTACAGATTGGTACAAAATGCAAATACATAAATAACAAGCTTATTTTGGATGGCATGGCATCGGTATGTGGTTCTGTGATTATATGCGAAAATTGATATACCTTTGCAGTTGTTTTGGTAAAAGATCAATCGTTAAATTTCCTATCTGTTGATCAAAATGTCGTGAAAATTCAGTTGAGTTCATTGTGTCGGGTGAGGAATTGTAACAAGTTTTACAAGATAGTTCAGCATTGTGAAGGCATACGAGGGAGTAAGAGGCGGCATTTTTGAGCTGAAGAAGGTTTGATGATGATTTATTTTTGGTTTCTAATCTTTACCATTGTTAATGGAAGTTTAGAAAGCGGGTACCATTCATCATGAACATGTAAATAGAAATTTTGGATACTGCATCTTCATGGACGTACGGTTTTAAGAACCCTATTCACTTTCGTTTGAAATTGTTATAGGCTTCTGTCTTTTGTTCTTGTATATTAATGCTTTTGATAATTTATTAATATTTTCATTCTTTAAAAT

Coding sequence (CDS)

ATGAATTCGGTTCCGCACCAGTTTGCGGCTCAACCTCCGTGGTTCTCGATGCCGCCGCCGTCTTGTGCATCTTTCTGGAATAACCTCAACGTGCGTGATCGTCTAAGGGATTTGCAAGAAACGCTGGATCTCGCAAAGTCGATGCAGAAAGAACTTGAGATGTTGATGATATTTAAAGATGGCAAATCGTCCGAGCAGAGTGCGGTTAGTGTGCCTAACGACAGTGAGTTTTCTGAGTACTTGGAAGATAGAAGGATTAATTTGGAGTTGCAAGAATCGCGTTCGGTTGAAGCTGTGGTTGCTTTGATGAGAAAGTTGAGAGCTCAGCTTCATCCATTTAGGATGGTCTATGACGAATCGAGTCCATGGCAAGAAAAAAACGCTGCAGTTAGGTTATCTACTAAATTATTGAAGGCCAAGAGAAATAAGCTGTGGAGAAAGAGGAAGAGGAAGCGCATTGCTGAATCACTTGCAAAGGAACGTGGAAGTTTTGACCTAGTTGATCGAGAGGCTGATGAATGGAGGGCCAGGGAGATCGCCAAGGATATTGCAAAACGCAAGGTGGAGAAGATGAAAGAAATTGCAAGAGTTAAAGCAAAAGAGGAGAAGAAGAGGATAGATTCTGAGCTTGAACTAGCACTAATAGTGGAAAAGTTGCAAGAACTTCGCTCTATCAGGATCCAAAAATTGAAGAAACAAGGTCATTTTCTACCTGAGGAGGATGATAAGTTTCTGGAGAAGGTTCGAGCTGCAGTTGAGGAAGAGGAACGTCAAGCCCTTGCTGCAGCTGATACGGATGCTGCCAGGGATGCCATTGCAACTGCAGAAGTGTCTAGGAAGACCATTCCAAGTTACAATCCTGAATCAAAAGATCCAAATAGTAATGCAGAAAGGCTCGAAGAAAGAAATGATCAAAGAACTGCGAGTGCAGATGATAAGGTCTCTAACATCAGCACTGATAAGGAACCTGGGAAACAGTTTGGAGAAGGACAAGGTTGTGGAAGAGTGTATGATTATGCGGCCAATTTACCAATGGAATTCTATCATTATTATTATGGAAGTAACACTGATATGGGGACATTAATTGAGGTTAGAAGATCGTGGGATGCATACATAAGACCTGGAGGAAGCCGAATACCGGGACATTGGGTTCAACCACCACCACCTGCTGATGAAATATGGGCAGCATATTTGGTGCGACCAAAATGA

Protein sequence

MNSVPHQFAAQPPWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNAERLEERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK

Homology

[Close]

BLAST of MC05g0390 vs. ExPASy Swiss-Prot
Match: Q8VYD3 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP59 PE=2 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 5.2e-101
Identity = 215/389 (55.27%), Postives = 266/389 (68.38%), Query Frame = 0


Query: 13  PWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVP 72
           P     PP C  FWN  N+ D+L+ LQ+TL+LAKSM+KELE L + KD K S ++AV   
Sbjct: 17  PMLPPDPPRCGMFWNTKNITDQLKQLQDTLNLAKSMEKELEALKMIKDAKGSVENAV--- 76

Query: 73  NDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRL 132
            DS   EYLE R+++L  QE  SV+A  +LM  LRAQL PFR V DE+SPW+EK+AAVRL
Sbjct: 77  QDSGV-EYLEARKMDLGQQEMLSVDAANSLMSTLRAQLEPFRFVVDENSPWEEKSAAVRL 136

Query: 133 STKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMK 192
           + K+ K+ RNKLW+KRKR+  AE  AKE   F+  DREADEWR +E+AKD+A RKV++MK
Sbjct: 137 TCKMKKSIRNKLWKKRKRRCAAEMRAKEPERFEQADREADEWREKEMAKDMANRKVDEMK 196

Query: 193 EIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAV 252
            I ++KAK E+KR++ ELELALIVE++QELRS+RI+KLKKQGHFLPEEDDKF E VRAAV
Sbjct: 197 AIEKIKAKRERKRLEPELELALIVEEMQELRSLRIEKLKKQGHFLPEEDDKFFESVRAAV 256

Query: 253 EEEERQALAAADTDAARDAIATAEVSRKTI--PSYNPESKDPNSNAERLEERNDQRTASA 312
           E+EE QA +  +T+     IA+ E +  T    + N   KD N+NA   E     RT  A
Sbjct: 257 EQEENQAQSLINTETEEHVIASEENTTLTTSNKTNNDTDKDSNTNAASCE-----RTMKA 316

Query: 313 DDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDA 372
            D                   GC    D  +NLP+E YHYYYGSN DMG LIE+RR WDA
Sbjct: 317 PD------------------NGC----DNISNLPVEVYHYYYGSNIDMGRLIEIRREWDA 374

Query: 373 YIRPGGSRIPGHWVQPPPPADEIWAAYLV 400
           Y+  GGSRIPGHWVQP PPA+EIWA+ LV
Sbjct: 377 YLSAGGSRIPGHWVQPSPPANEIWASCLV 374

[Close]

BLAST of MC05g0390 vs. NCBI nr
Match: XP_022147279.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Momordica charantia] >XP_022147280.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Momordica charantia])

HSP 1 Score: 768 bits (1982), Expect = 3.02e-279
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKD 60
           MNSVPHQFAAQPPWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKD
Sbjct: 1   MNSVPHQFAAQPPWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKD 60

Query: 61  GKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPFRMVYDES 120
           GKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPFRMVYDES
Sbjct: 61  GKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPFRMVYDES 120

Query: 121 SPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIA 180
           SPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIA
Sbjct: 121 SPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIA 180

Query: 181 KDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEE 240
           KDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEE
Sbjct: 181 KDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEE 240

Query: 241 DDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNAERLE 300
           DDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNAERLE
Sbjct: 241 DDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNAERLE 300

Query: 301 ERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGT 360
           ERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGT
Sbjct: 301 ERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGT 360

Query: 361 LIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 402
           LIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK
Sbjct: 361 LIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 402

[Close]

BLAST of MC05g0390 vs. NCBI nr
Match: XP_022924846.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucurbita moschata])

HSP 1 Score: 640 bits (1650), Expect = 1.27e-228
Identity = 348/409 (85.09%), Postives = 371/409 (90.71%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPWFSMPPP----SCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLM 60
           MN VPHQFAAQPP F MPPP    SC+SFW+NLNVRDRLRDLQ++LDLAKSMQKELEML 
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEMLT 60

Query: 61  IFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPF 120
           I K+GKSSEQSA ++P DS   EFS+YLED+RI+LELQESRSVE   ALM++LR QLHPF
Sbjct: 61  IIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPF 120

Query: 121 RMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADE 180
           R+  DESS  +    AV+LSTKL KAKRNK WRKRKRKRIAESLAKER SFD VDREADE
Sbjct: 121 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180

Query: 181 WRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQ 240
           WRAREIAKDIAKRKVEKMKEIAR+KAKEEKK++DSELELALIVEKLQELRSIRIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN 300
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTIPSYN ES+DP+
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNLESRDPD 300

Query: 301 SNAERLEERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYG 360
           S  ER EERNDQRTAS DDKVSNIST+KEPGKQFGE QG GR YDYAANLPMEFYHYYYG
Sbjct: 301 SATERSEERNDQRTASVDDKVSNISTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 360

Query: 361 SNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 402
           SNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRPK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 405

[Close]

BLAST of MC05g0390 vs. NCBI nr
Match: KAG7019034.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 639 bits (1647), Expect = 3.63e-228
Identity = 346/409 (84.60%), Postives = 370/409 (90.46%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPWFSMPPPS----CASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLM 60
           MN VPHQFAAQPP F MPPP+    C+SFW+NLNVRDRLRDLQ++LDLAKSMQKELEML 
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPFCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEMLT 60

Query: 61  IFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPF 120
           I K+GKSSEQSA ++P DS   EFS+YLED+RI+LELQESRSVE   ALM++LR QLHPF
Sbjct: 61  IIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPF 120

Query: 121 RMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADE 180
           R+  DESS  +    AV+LSTKL KAKRNK WRKRKRKRIAESLAKER SFD VDREADE
Sbjct: 121 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180

Query: 181 WRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQ 240
           WRAREIAKDIAKRKVEKMKEIAR+KAKEEKK++DSELELALIVEKLQELRSIRIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN 300
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTIPSYNPES+DP+
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNPESRDPD 300

Query: 301 SNAERLEERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYG 360
           S  ER EERNDQR AS DDKVSN ST+KEPGKQFGE QG GR YDYAANLPMEFYHYYYG
Sbjct: 301 SATERSEERNDQRAASVDDKVSNTSTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 360

Query: 361 SNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 402
           SNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRPK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 405

[Close]

BLAST of MC05g0390 vs. NCBI nr
Match: XP_038877454.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Benincasa hispida] >XP_038877455.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Benincasa hispida] >XP_038877456.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Benincasa hispida])

HSP 1 Score: 637 bits (1644), Expect = 1.08e-227
Identity = 343/410 (83.66%), Postives = 368/410 (89.76%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPWFSMPPP-----SCASFWNNLNVRDRLRDLQETLDLAKSMQKELEML 60
           MN VPHQFA QPPWF +PPP     SC+SFW+NLNVRDRLRDLQ+TLDLAKSMQKELEML
Sbjct: 1   MNPVPHQFAPQPPWFPVPPPNPPPSSCSSFWDNLNVRDRLRDLQDTLDLAKSMQKELEML 60

Query: 61  MIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHP 120
           MI K+G SSEQSA ++PN S   EFS+YL+DRRIN ELQESRSVE   ALM++LRAQLHP
Sbjct: 61  MIVKEGNSSEQSADNLPNGSSIGEFSDYLKDRRINSELQESRSVEIAAALMKRLRAQLHP 120

Query: 121 FRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREAD 180
           F +  DESS     + AV+LS KLLKAKRNK WRK+KRKRIAESLAKER SFD VD+EAD
Sbjct: 121 FSLATDESSL----SEAVKLSGKLLKAKRNKQWRKKKRKRIAESLAKERESFDQVDQEAD 180

Query: 181 EWRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKK 240
           +WRAREIAKDIAKRKVEKMKEIAR+KAKEEKK++DSELELALIVEKLQELRSIRIQKLKK
Sbjct: 181 KWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKK 240

Query: 241 QGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDP 300
           QGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTIPSYNPES+DP
Sbjct: 241 QGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNPESRDP 300

Query: 301 NSNAERLEERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYY 360
            S     EERNDQRTASADDK+SN STDKEPGKQFGE QG GR+YDYA NLPMEFYHYYY
Sbjct: 301 ASATNGSEERNDQRTASADDKISNTSTDKEPGKQFGEVQGYGRMYDYAVNLPMEFYHYYY 360

Query: 361 GSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 402
           GSNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRPK
Sbjct: 361 GSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 406

[Close]

BLAST of MC05g0390 vs. NCBI nr
Match: XP_023526863.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 636 bits (1640), Expect = 4.23e-227
Identity = 345/409 (84.35%), Postives = 369/409 (90.22%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPWFSMPPP----SCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLM 60
           MN VPHQFAAQPP F MPPP    SC+SFW+NLNVRDRLRDLQ++LDLAKSMQKELE+L 
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEVLT 60

Query: 61  IFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPF 120
           I K+GKSSEQSA ++P DS   EFS+YLED+RI+LELQESRSVE   ALM++LR QLHP 
Sbjct: 61  IIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPL 120

Query: 121 RMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADE 180
           R+  DESS  +    AV+LSTKL KAKRNK WRKRKRKRIAESLAKER SFD VDREADE
Sbjct: 121 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180

Query: 181 WRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQ 240
           WRAREIAKDIAKRKVEKMKEIAR+KAKEEKK++DSELELALIVEKLQELRSIRIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN 300
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTIPSYNPES+DP+
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNPESRDPD 300

Query: 301 SNAERLEERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYG 360
           S  ER EERNDQR AS DDKVSN ST+KEPGKQFGE QG GR YDYAANLPMEFYHYYYG
Sbjct: 301 SATERSEERNDQRAASVDDKVSNTSTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 360

Query: 361 SNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 402
           SNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRPK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 405

[Close]

BLAST of MC05g0390 vs. ExPASy TrEMBL
Match: A0A6J1CZQ3 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Momordica charantia OX=3673 GN=LOC111016273 PE=4 SV=1)

HSP 1 Score: 768 bits (1982), Expect = 1.46e-279
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKD 60
           MNSVPHQFAAQPPWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKD
Sbjct: 1   MNSVPHQFAAQPPWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKD 60

Query: 61  GKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPFRMVYDES 120
           GKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPFRMVYDES
Sbjct: 61  GKSSEQSAVSVPNDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPFRMVYDES 120

Query: 121 SPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIA 180
           SPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIA
Sbjct: 121 SPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIA 180

Query: 181 KDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEE 240
           KDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEE
Sbjct: 181 KDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEE 240

Query: 241 DDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNAERLE 300
           DDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNAERLE
Sbjct: 241 DDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPNSNAERLE 300

Query: 301 ERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGT 360
           ERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGT
Sbjct: 301 ERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGT 360

Query: 361 LIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 402
           LIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK
Sbjct: 361 LIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 402

[Close]

BLAST of MC05g0390 vs. ExPASy TrEMBL
Match: A0A6J1EAK8 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432209 PE=4 SV=1)

HSP 1 Score: 640 bits (1650), Expect = 6.15e-229
Identity = 348/409 (85.09%), Postives = 371/409 (90.71%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPWFSMPPP----SCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLM 60
           MN VPHQFAAQPP F MPPP    SC+SFW+NLNVRDRLRDLQ++LDLAKSMQKELEML 
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEMLT 60

Query: 61  IFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPF 120
           I K+GKSSEQSA ++P DS   EFS+YLED+RI+LELQESRSVE   ALM++LR QLHPF
Sbjct: 61  IIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPF 120

Query: 121 RMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADE 180
           R+  DESS  +    AV+LSTKL KAKRNK WRKRKRKRIAESLAKER SFD VDREADE
Sbjct: 121 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180

Query: 181 WRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQ 240
           WRAREIAKDIAKRKVEKMKEIAR+KAKEEKK++DSELELALIVEKLQELRSIRIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN 300
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTIPSYN ES+DP+
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNLESRDPD 300

Query: 301 SNAERLEERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYG 360
           S  ER EERNDQRTAS DDKVSNIST+KEPGKQFGE QG GR YDYAANLPMEFYHYYYG
Sbjct: 301 SATERSEERNDQRTASVDDKVSNISTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 360

Query: 361 SNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 402
           SNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRPK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 405

[Close]

BLAST of MC05g0390 vs. ExPASy TrEMBL
Match: A0A6J1IWF2 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479855 PE=4 SV=1)

HSP 1 Score: 634 bits (1634), Expect = 1.68e-226
Identity = 345/409 (84.35%), Postives = 368/409 (89.98%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPWFSMPPP----SCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLM 60
           MN VPHQFAAQPP F MPPP    SC+SFW+NLNVRDRLRDLQ++LDLAKSMQKELEML 
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEMLT 60

Query: 61  IFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPF 120
           I K+ KSSEQSA ++P DS   EFS+YLED+RI+LELQESRSVE   ALM++LR QLHPF
Sbjct: 61  IIKESKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPF 120

Query: 121 RMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADE 180
           R+  DESS  +    AV+LSTKL KAKRNK WRKRKRKRIAESLAKER SFD VDREADE
Sbjct: 121 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180

Query: 181 WRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQ 240
           WRAREIAKDIAKRKVEKMKEIAR+KAKEEKK++DSELELALIVEKLQELRSIRIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN 300
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTI SYNPES+DP+
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTISSYNPESRDPD 300

Query: 301 SNAERLEERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYG 360
           S  ER EERNDQ TAS DDKVSN ST+KEPGKQFGE QG GR YDYAANLPMEFYHYYYG
Sbjct: 301 SATERPEERNDQTTASVDDKVSNTSTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 360

Query: 361 SNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 402
           SNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRPK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 405

[Close]

BLAST of MC05g0390 vs. ExPASy TrEMBL
Match: A0A6J1EAC6 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432209 PE=4 SV=1)

HSP 1 Score: 632 bits (1630), Expect = 8.19e-226
Identity = 347/414 (83.82%), Postives = 371/414 (89.61%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPWFSMPPP----SCASFWNNLNVRDRLRDLQETLDLAKSM-----QKE 60
           MN VPHQFAAQPP F MPPP    SC+SFW+NLNVRDRLRDLQ++LDLAKS+     QKE
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSIINIDRQKE 60

Query: 61  LEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQESRSVEAVVALMRKLRA 120
           LEML I K+GKSSEQSA ++P DS   EFS+YLED+RI+LELQESRSVE   ALM++LR 
Sbjct: 61  LEMLTIIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLRE 120

Query: 121 QLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVD 180
           QLHPFR+  DESS  +    AV+LSTKL KAKRNK WRKRKRKRIAESLAKER SFD VD
Sbjct: 121 QLHPFRIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD 180

Query: 181 READEWRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQ 240
           READEWRAREIAKDIAKRKVEKMKEIAR+KAKEEKK++DSELELALIVEKLQELRSIRIQ
Sbjct: 181 READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQ 240

Query: 241 KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPE 300
           KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTIPSYN E
Sbjct: 241 KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNLE 300

Query: 301 SKDPNSNAERLEERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFY 360
           S+DP+S  ER EERNDQRTAS DDKVSNIST+KEPGKQFGE QG GR YDYAANLPMEFY
Sbjct: 301 SRDPDSATERSEERNDQRTASVDDKVSNISTNKEPGKQFGEVQGFGRAYDYAANLPMEFY 360

Query: 361 HYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 402
           HYYYGSNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRPK
Sbjct: 361 HYYYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 410

[Close]

BLAST of MC05g0390 vs. ExPASy TrEMBL
Match: A0A6J1IZE8 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479855 PE=4 SV=1)

HSP 1 Score: 626 bits (1614), Expect = 2.23e-223
Identity = 344/414 (83.09%), Postives = 368/414 (88.89%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPWFSMPPP----SCASFWNNLNVRDRLRDLQETLDLAKSM-----QKE 60
           MN VPHQFAAQPP F MPPP    SC+SFW+NLNVRDRLRDLQ++LDLAKS+     QKE
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSIINIDRQKE 60

Query: 61  LEMLMIFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQESRSVEAVVALMRKLRA 120
           LEML I K+ KSSEQSA ++P DS   EFS+YLED+RI+LELQESRSVE   ALM++LR 
Sbjct: 61  LEMLTIIKESKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLRE 120

Query: 121 QLHPFRMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVD 180
           QLHPFR+  DESS  +    AV+LSTKL KAKRNK WRKRKRKRIAESLAKER SFD VD
Sbjct: 121 QLHPFRIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD 180

Query: 181 READEWRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQ 240
           READEWRAREIAKDIAKRKVEKMKEIAR+KAKEEKK++DSELELALIVEKLQELRSIRIQ
Sbjct: 181 READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQ 240

Query: 241 KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPE 300
           KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATAEVSRKTI SYNPE
Sbjct: 241 KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTISSYNPE 300

Query: 301 SKDPNSNAERLEERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFY 360
           S+DP+S  ER EERNDQ TAS DDKVSN ST+KEPGKQFGE QG GR YDYAANLPMEFY
Sbjct: 301 SRDPDSATERPEERNDQTTASVDDKVSNTSTNKEPGKQFGEVQGFGRAYDYAANLPMEFY 360

Query: 361 HYYYGSNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 402
           HYYYGSNTDMGTLIEVRRSWDA+IRPGGSRIPGHWVQPPPPADEIWAAYLVRPK
Sbjct: 361 HYYYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 410

[Close]

BLAST of MC05g0390 vs. TAIR 10
Match: AT2G46200.1 (unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 16; Bacteria - 188; Metazoa - 1070; Fungi - 227; Plants - 145; Viruses - 4; Other Eukaryotes - 1318 (source: NCBI BLink). )

HSP 1 Score: 369.4 bits (947), Expect = 3.7e-102
Identity = 215/389 (55.27%), Postives = 266/389 (68.38%), Query Frame = 0


Query: 13  PWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVP 72
           P     PP C  FWN  N+ D+L+ LQ+TL+LAKSM+KELE L + KD K S ++AV   
Sbjct: 17  PMLPPDPPRCGMFWNTKNITDQLKQLQDTLNLAKSMEKELEALKMIKDAKGSVENAV--- 76

Query: 73  NDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRL 132
            DS   EYLE R+++L  QE  SV+A  +LM  LRAQL PFR V DE+SPW+EK+AAVRL
Sbjct: 77  QDSGV-EYLEARKMDLGQQEMLSVDAANSLMSTLRAQLEPFRFVVDENSPWEEKSAAVRL 136

Query: 133 STKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMK 192
           + K+ K+ RNKLW+KRKR+  AE  AKE   F+  DREADEWR +E+AKD+A RKV++MK
Sbjct: 137 TCKMKKSIRNKLWKKRKRRCAAEMRAKEPERFEQADREADEWREKEMAKDMANRKVDEMK 196

Query: 193 EIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAV 252
            I ++KAK E+KR++ ELELALIVE++QELRS+RI+KLKKQGHFLPEEDDKF E VRAAV
Sbjct: 197 AIEKIKAKRERKRLEPELELALIVEEMQELRSLRIEKLKKQGHFLPEEDDKFFESVRAAV 256

Query: 253 EEEERQALAAADTDAARDAIATAEVSRKTI--PSYNPESKDPNSNAERLEERNDQRTASA 312
           E+EE QA +  +T+     IA+ E +  T    + N   KD N+NA   E     RT  A
Sbjct: 257 EQEENQAQSLINTETEEHVIASEENTTLTTSNKTNNDTDKDSNTNAASCE-----RTMKA 316

Query: 313 DDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDA 372
            D                   GC    D  +NLP+E YHYYYGSN DMG LIE+RR WDA
Sbjct: 317 PD------------------NGC----DNISNLPVEVYHYYYGSNIDMGRLIEIRREWDA 374

Query: 373 YIRPGGSRIPGHWVQPPPPADEIWAAYLV 400
           Y+  GGSRIPGHWVQP PPA+EIWA+ LV
Sbjct: 377 YLSAGGSRIPGHWVQPSPPANEIWASCLV 374

[Close]

BLAST of MC05g0390 vs. TAIR 10
Match: AT2G46200.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 369.4 bits (947), Expect = 3.7e-102
Identity = 215/389 (55.27%), Postives = 266/389 (68.38%), Query Frame = 0


Query: 13  PWFSMPPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLMIFKDGKSSEQSAVSVP 72
           P     PP C  FWN  N+ D+L+ LQ+TL+LAKSM+KELE L + KD K S ++AV   
Sbjct: 17  PMLPPDPPRCGMFWNTKNITDQLKQLQDTLNLAKSMEKELEALKMIKDAKGSVENAV--- 76

Query: 73  NDSEFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPFRMVYDESSPWQEKNAAVRL 132
            DS   EYLE R+++L  QE  SV+A  +LM  LRAQL PFR V DE+SPW+EK+AAVRL
Sbjct: 77  QDSGV-EYLEARKMDLGQQEMLSVDAANSLMSTLRAQLEPFRFVVDENSPWEEKSAAVRL 136

Query: 133 STKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADEWRAREIAKDIAKRKVEKMK 192
           + K+ K+ RNKLW+KRKR+  AE  AKE   F+  DREADEWR +E+AKD+A RKV++MK
Sbjct: 137 TCKMKKSIRNKLWKKRKRRCAAEMRAKEPERFEQADREADEWREKEMAKDMANRKVDEMK 196

Query: 193 EIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQGHFLPEEDDKFLEKVRAAV 252
            I ++KAK E+KR++ ELELALIVE++QELRS+RI+KLKKQGHFLPEEDDKF E VRAAV
Sbjct: 197 AIEKIKAKRERKRLEPELELALIVEEMQELRSLRIEKLKKQGHFLPEEDDKFFESVRAAV 256

Query: 253 EEEERQALAAADTDAARDAIATAEVSRKTI--PSYNPESKDPNSNAERLEERNDQRTASA 312
           E+EE QA +  +T+     IA+ E +  T    + N   KD N+NA   E     RT  A
Sbjct: 257 EQEENQAQSLINTETEEHVIASEENTTLTTSNKTNNDTDKDSNTNAASCE-----RTMKA 316

Query: 313 DDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDA 372
            D                   GC    D  +NLP+E YHYYYGSN DMG LIE+RR WDA
Sbjct: 317 PD------------------NGC----DNISNLPVEVYHYYYGSNIDMGRLIEIRREWDA 374

Query: 373 YIRPGGSRIPGHWVQPPPPADEIWAAYLV 400
           Y+  GGSRIPGHWVQP PPA+EIWA+ LV
Sbjct: 377 YLSAGGSRIPGHWVQPSPPANEIWASCLV 374

The following BLAST results are available for this feature:

BLAST of MC05g0390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYD3	5.2e-101	55.27	U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Arabidopsis thaliana O...	[more]

BLAST of MC05g0390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147279.1	3.02e-279	100.00	U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Momordica charantia] >XP...	[more]
XP_022924846.1	1.27e-228	85.09	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucurbita mos...	[more]
KAG7019034.1	3.63e-228	84.60	U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Cucurbita argyrosperma s...	[more]
XP_038877454.1	1.08e-227	83.66	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Benincasa his...	[more]
XP_023526863.1	4.23e-227	84.35	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucurbita pep...	[more]

BLAST of MC05g0390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZQ3	1.46e-279	100.00	U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Momordica charantia OX...	[more]
A0A6J1EAK8	6.15e-229	85.09	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucurbita m...	[more]
A0A6J1IWF2	1.68e-226	84.35	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucurbita m...	[more]
A0A6J1EAC6	8.19e-226	83.82	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucurbita m...	[more]
A0A6J1IZE8	2.23e-223	83.09	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucurbita m...	[more]

BLAST of MC05g0390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46200.1	3.7e-102	55.27	unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 1...	[more]
AT2G46200.2	3.7e-102	55.27	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 35..55
None	No IPR available	COILS	Coil	Coil	coord: 245..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..329
None	No IPR available	PANTHER	PTHR48190	FAMILY NOT NAMED	coord: 14..402
IPR031974	Programmed cell death protein 7	PFAM	PF16021	PDCD7	coord: 123..398 e-value: 6.4E-19 score: 68.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0390.1	MC05g0390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane