MC05g0375 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0375
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	50S ribosomal protein L5, chloroplastic
Location	MC05: 2826147 .. 2828936 (-)
RNA-Seq Expression	MC05g0375
Synteny	MC05g0375

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGGCTATTCACGGAATTTTTGAAATTAAGAAAACTCCTTTGGCTGTGAAATGCTCTTTTTAATCAACTCCTTCACAGAGCGAAGGAGAAGCTCCTCTGAACCCCGATGGCCGCTTCTTCGCTGTTGAGCTCCGCCGCGTCGTCGTTTCATGGTCATTGCCCGCTCTTCTCGGTCCGGTTTCCTGCACCGGGTGCGTGCGGAAACCCTAGCAATGTAGCTCCATTGGCGGTGAGAGTCAAGGCCGCGGCTGGTGATTCTATAGTGCTTGTGGAGAAGGCAGAGGCGGAGAAGGTCAACAGGCTCAAATCCAATTACATCGAGAAAATCGTGCCGCTGCTTATGGACGAGTTCTCCTACACCAATATCCACCAGGTGGTGACCGAATATTTTCGTAATTTATTAGCTGTTGGTTGAATTCTTAATTTATTTGCTCAATTGGTGGCTGGAGTTCGCCGGGTTTTAAATTTCGTGGAGGTTGGGTTGGATTGGCTAGGTAATTTTAGAGTTTAGTTTTAATTGTTTGCGGAGGGATCATTAATGTGTTCTGAGATTATTAAAAGAATTGGAAAATGTTGATTGTTTGTTTTTACCCCTTCTTTCAACCCATGAAATTCGACTATGAACATAACCACTTGGCTTAGCTGAGGTTTAAGTTCCTTTTATTGGAGGGAAATGCACATTAATATAAAACCACACACGTACTTCTATAGTTTGTATGCAAATATTTACACCCATATGGAACATAAGAATTCTTGATGAATTAAATACCCAGAAAACTGGGACCAAATTCATACTTATACTCAGTAGTAGTATGCTACAGCTACAGTACTTGTTCTCCTAGATTTAAGTTCGAATTTTGAATTTTTGTGGTTGTGATTCTAATTAGTGGGCTCAGAATTCTGGTTTAAGTGTTTTTTTTTTTCTTTTACTCCCTCTTAAACATTTGACAGCACATATGACGAATAAACATGATTATCTTAAGGAAATATTTGTACCTTTTCTGTTAGGTCCCAAAAATTGAAAAGATTGTTGTGAACTGTGGTATTGGAGATGCACAACAGAATGCGAAAGGTTTGGAAGCTGCAATGAATGAGCTAGCATTGATTACAGGACAACGACCTGTGAAGACGCGTGCAAAGAAGTCCATTGCAACCTTCAAGATCAGGGAAGGTCAACCACTTGGGATTGCTGCAACTCTTCGAGGAAGTGTGAGTTCTCCTTGTTCTTCTTAAAATTTTCTGTTAGTCATTGTCTCTTTTGATCTTTTGGCTCCTATTATAGTCCTCAGTGCTACTTGGTTCAGCGTATCTTGAATTGGAAAGTACGTTTTGGTACTTGGAATTGGTTCTGATTTTCAATATTTGTATTTGATATGCATTTGTAGTTCCTTTTCATGTCATATTTACAGTAACAATGTTACGAAGATGATATTATATGCTTTAATGTGTTTGTGTGGTAGATTTCTCGCGTATGATGATGTTAGGAATTTGATTCTTTGAGATGATTGTCTAAAACAAGTGCAAAGGAATGTCCTCGAACGAGTGCGTGGAAGGTATCTAGCATCATTGAATTGATGAAGTCATGGTTGTGGCTGCATGTATTAGTTAATATTACTTTCATGTTCTGTATATGCTTTTAATCTGGTTAGTGTAGTGGATTCTCTTGTATGATGATGCTAGGAATTCAATTATTCTAGATAATTGTCTAAAACAAGTCTGTAGGAATGACCGTGGAGGAGGGAGTTGCTCCTTCATGGGCTCGACACACTTATCACCGTAATACTCATTTAGAGTACAAGATTTTTATGCCAATTAATGTGAAAGAACCATAAACCTAACGTTGTAATAATGGACGACCTTACTTAAACAGGATTTGTTTTATAGGTTGTAATAGTGGACGACCTTACTTGAATAGGATCTATTTTATAGGTTGTACTACTGTGTCCTTTAGTTTTAATAATGGAAAGTATGAAGCATCATTACACGGAAAGAAGTTATGGGTGTGACTTGGCACTCATGTCTTAAATCTTAAAGACTATTCAGTTCTTAGGCAGCTTGCTTATTGACTGTATTTACAGGTGATGTACTCCTTCCTGGATCGTGTGATCAACTTGGGGCTGCCTAGGACGAGGGACTTTCAGGGAGTGAACTCAAATAGCTTTGATGGACATGGAAATTACTCCATCGGCATCCGCGAACAGAGCGTGTTTCCAGAAATAAAGTTCGACACATTCGGCAAACCGAGGGGGATGGACATTTGCATCACAACAACAGCTGAAACAGATCAAGAAGCTCAGCGACTCTTGGCTCTCATGGGAATGCCTTTCAGAGAGAGCAGTGGCTCTGCAACTTTGATGCGGAAAAAGAAGCTGAAGTCCCACCATTTTGATTCCAAATCCAAGGGAAGAGCTCGGAGGTAATTAATTTATTTCAGTCACACAACTTTTAAGCTTCAACTCATTTCTTGTATCTGTACAAGAAGAAACTGCACTCGAGCAAACTTAGAATGGGCTGTATCGTGTATGCCAATTTGATGGTGCTATAGATTTTTGTTTGTGAGACCAGTCCCTATAACTCGGAAGTTTGATGCTCAATTTCGCCGACCCGAACGGAGTTCTGGCACCGGTTGCTGCGTTAGAGCAGTAAATCCCAGTAGCCATTGCTCAAATCCTAGAACTTCCTCTGCATAGTAAGAGCTATAAATTATAACATGTGATTTTGTAGTGATATTCTCTGAAAACAGGGAAAGATTCAGCCATATCATCTGCCAGTATGCTTTTTTTCCTTGA

mRNA sequence

CGAGGCTATTCACGGAATTTTTGAAATTAAGAAAACTCCTTTGGCTGTGAAATGCTCTTTTTAATCAACTCCTTCACAGAGCGAAGGAGAAGCTCCTCTGAACCCCGATGGCCGCTTCTTCGCTGTTGAGCTCCGCCGCGTCGTCGTTTCATGGTCATTGCCCGCTCTTCTCGGTCCGGTTTCCTGCACCGGGTGCGTGCGGAAACCCTAGCAATGTAGCTCCATTGGCGGTGAGAGTCAAGGCCGCGGCTGGTGATTCTATAGTGCTTGTGGAGAAGGCAGAGGCGGAGAAGGTCAACAGGCTCAAATCCAATTACATCGAGAAAATCGTGCCGCTGCTTATGGACGAGTTCTCCTACACCAATATCCACCAGGTCCCAAAAATTGAAAAGATTGTTGTGAACTGTGGTATTGGAGATGCACAACAGAATGCGAAAGGTTTGGAAGCTGCAATGAATGAGCTAGCATTGATTACAGGACAACGACCTGTGAAGACGCGTGCAAAGAAGTCCATTGCAACCTTCAAGATCAGGGAAGGTCAACCACTTGGGATTGCTGCAACTCTTCGAGGAAGTGTGATGTACTCCTTCCTGGATCGTGTGATCAACTTGGGGCTGCCTAGGACGAGGGACTTTCAGGGAGTGAACTCAAATAGCTTTGATGGACATGGAAATTACTCCATCGGCATCCGCGAACAGAGCGTGTTTCCAGAAATAAAGTTCGACACATTCGGCAAACCGAGGGGGATGGACATTTGCATCACAACAACAGCTGAAACAGATCAAGAAGCTCAGCGACTCTTGGCTCTCATGGGAATGCCTTTCAGAGAGAGCAGTGGCTCTGCAACTTTGATGCGGAAAAAGAAGCTGAAGTCCCACCATTTTGATTCCAAATCCAAGGGAAGAGCTCGGAGGTAATTAATTTATTTCAGTCACACAACTTTTAAGCTTCAACTCATTTCTTGTATCTGTACAAGAAGAAACTGCACTCGAGCAAACTTAGAATGGGCTGTATCGTGTATGCCAATTTGATGGTGCTATAGATTTTTGTTTGTGAGACCAGTCCCTATAACTCGGAAGTTTGATGCTCAATTTCGCCGACCCGAACGGAGTTCTGGCACCGGTTGCTGCGTTAGAGCAGTAAATCCCAGTAGCCATTGCTCAAATCCTAGAACTTCCTCTGCATAGTAAGAGCTATAAATTATAACATGTGATTTTGTAGTGATATTCTCTGAAAACAGGGAAAGATTCAGCCATATCATCTGCCAGTATGCTTTTTTTCCTTGA

Coding sequence (CDS)

ATGGCCGCTTCTTCGCTGTTGAGCTCCGCCGCGTCGTCGTTTCATGGTCATTGCCCGCTCTTCTCGGTCCGGTTTCCTGCACCGGGTGCGTGCGGAAACCCTAGCAATGTAGCTCCATTGGCGGTGAGAGTCAAGGCCGCGGCTGGTGATTCTATAGTGCTTGTGGAGAAGGCAGAGGCGGAGAAGGTCAACAGGCTCAAATCCAATTACATCGAGAAAATCGTGCCGCTGCTTATGGACGAGTTCTCCTACACCAATATCCACCAGGTCCCAAAAATTGAAAAGATTGTTGTGAACTGTGGTATTGGAGATGCACAACAGAATGCGAAAGGTTTGGAAGCTGCAATGAATGAGCTAGCATTGATTACAGGACAACGACCTGTGAAGACGCGTGCAAAGAAGTCCATTGCAACCTTCAAGATCAGGGAAGGTCAACCACTTGGGATTGCTGCAACTCTTCGAGGAAGTGTGATGTACTCCTTCCTGGATCGTGTGATCAACTTGGGGCTGCCTAGGACGAGGGACTTTCAGGGAGTGAACTCAAATAGCTTTGATGGACATGGAAATTACTCCATCGGCATCCGCGAACAGAGCGTGTTTCCAGAAATAAAGTTCGACACATTCGGCAAACCGAGGGGGATGGACATTTGCATCACAACAACAGCTGAAACAGATCAAGAAGCTCAGCGACTCTTGGCTCTCATGGGAATGCCTTTCAGAGAGAGCAGTGGCTCTGCAACTTTGATGCGGAAAAAGAAGCTGAAGTCCCACCATTTTGATTCCAAATCCAAGGGAAGAGCTCGGAGGTAA

Protein sequence

MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEAEKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELALITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVNSNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFRESSGSATLMRKKKLKSHHFDSKSKGRARR

Homology

[Close]

BLAST of MC05g0375 vs. ExPASy Swiss-Prot
Match: P82192 (50S ribosomal protein L5, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL5 PE=1 SV=3)

HSP 1 Score: 345.9 bits (886), Expect = 4.1e-94
Identity = 187/266 (70.30%), Postives = 218/266 (81.95%), Query Frame = 0


Query: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEA 60
           MA++SLL S +SSF G      VRF    +      V   +  VKAAAG + V V+KAEA
Sbjct: 1   MASTSLLQSTSSSFAG------VRFHCRTSAA--PRVGLSSFTVKAAAG-TAVFVDKAEA 60

Query: 61  EKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120
           E +NRLK+NYIEK+VPLL +EFSY+NI +VPK+ KIVVNCGIGDA QNAKGL+AA+NELA
Sbjct: 61  ETINRLKTNYIEKMVPLLKEEFSYSNILEVPKVVKIVVNCGIGDASQNAKGLDAAINELA 120

Query: 121 LITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVN 180
           LITGQRPVKT+AK SIA FK+REG  LGIA TLRG++MYSFLDR+INL LPRTRDFQGVN
Sbjct: 121 LITGQRPVKTKAKTSIAGFKVREGMTLGIAVTLRGNLMYSFLDRLINLALPRTRDFQGVN 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFR 240
            NSFDGHGNYS+G REQSVFPEIK +  GK RGMD+CITTTA+TD+EA +LL+LMGMPFR
Sbjct: 181 PNSFDGHGNYSVGFREQSVFPEIKPEIVGKARGMDVCITTTAKTDKEAYKLLSLMGMPFR 240

Query: 241 ESSGSATLMRKKKLKSHHFDSKSKGR 267
           E SG +TL+RKKKLKSHHFD+K KGR
Sbjct: 241 EGSGPSTLVRKKKLKSHHFDAK-KGR 256

[Close]

BLAST of MC05g0375 vs. ExPASy Swiss-Prot
Match: O04603 (50S ribosomal protein L5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL5 PE=2 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.0e-92
Identity = 175/268 (65.30%), Postives = 212/268 (79.10%), Query Frame = 0


Query: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEA 60
           MA+ SLL S+ASSFHG       RF    A  +   ++P    V   +    VLVEK+EA
Sbjct: 1   MASPSLLQSSASSFHG-------RFSPLAAPSSARMLSPPLRNVVKVSASGTVLVEKSEA 60

Query: 61  EKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120
           EK  RLK+ Y+E+I+P L +EF Y NIHQVPK++KIVVNCGIGDA QN KGLEAAM ++A
Sbjct: 61  EKTQRLKTAYLERIIPALKEEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIA 120

Query: 121 LITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVN 180
           LITGQ+P+KTRA+ SIATFKIRE QPLGIA TLRG VMYSFLDR+INL LPRTRDFQGV+
Sbjct: 121 LITGQKPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVS 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFR 240
            +SFDG+GNYSIG+++Q VFPEI+FD  GK RGMD+CI+TTA++DQE Q+LLALMGMPFR
Sbjct: 181 PSSFDGNGNYSIGVKDQGVFPEIRFDAVGKTRGMDVCISTTAKSDQEGQKLLALMGMPFR 240

Query: 241 ESSGSAT--LMRKKKLKSHHFDSKSKGR 267
           E  G +T  ++RKKKLKSHHFD+K KG+
Sbjct: 241 EGGGGSTGAIVRKKKLKSHHFDAKGKGK 261

[Close]

BLAST of MC05g0375 vs. ExPASy Swiss-Prot
Match: Q9ZST0 (50S ribosomal protein L5, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 297.0 bits (759), Expect = 2.2e-79
Identity = 149/248 (60.08%), Postives = 188/248 (75.81%), Query Frame = 0


Query: 19  PLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEAEKVNRLKSNYIEKIVPLL 78
           P  ++R  A  A   P   AP        +   IVLV+  EA+KV+RLK+ Y +K+VPL+
Sbjct: 36  PRRALRVAASAAADAPPKPAP-----PPTSPSGIVLVDPTEAQKVHRLKAVYDQKVVPLI 95

Query: 79  MDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELALITGQRPVKTRAKKSIAT 138
            +EF YTN+HQVPK+EKIVVNCG+G    N+KGLE+AM +LA+ITGQ PVKT+AKKS+A+
Sbjct: 96  TEEFGYTNVHQVPKVEKIVVNCGLGAEAGNSKGLESAMKDLAMITGQWPVKTKAKKSVAS 155

Query: 139 FKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVNSNSFDGHGNYSIGIREQS 198
           FKIREG  +GIA TLRG VM++FLDR+INLGLPRT DF GVN NSFDGHGN++IG+R+Q 
Sbjct: 156 FKIREGNTIGIAVTLRGRVMFNFLDRLINLGLPRTMDFLGVNPNSFDGHGNFTIGLRDQG 215

Query: 199 VFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFRESSGSATLMRKKKLKSHH 258
           VFPEI ++  GK  GMD+CI TTA+TD EA RLL L+GMPF E   S+ ++RKK+LK HH
Sbjct: 216 VFPEIPYEVGGKKNGMDVCIVTTAKTDNEALRLLTLLGMPFAEHIKSSVVIRKKRLKRHH 275

Query: 259 FDSKSKGR 267
           F SK +GR
Sbjct: 276 FMSKGRGR 278

[Close]

BLAST of MC05g0375 vs. ExPASy Swiss-Prot
Match: B8HMR6 (50S ribosomal protein L5 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rplE PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.7e-61
Identity = 111/177 (62.71%), Postives = 140/177 (79.10%), Query Frame = 0


Query: 65  RLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELALITG 124
           RLK+ Y+E  VP LM++F Y NIHQVPK+ KI +N G+G+A QNAK LEA++NE+ALI G
Sbjct: 4   RLKTYYLENAVPKLMEQFKYKNIHQVPKLVKITINRGLGEAAQNAKSLEASLNEIALIAG 63

Query: 125 QRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVNSNSF 184
           Q+PV TRAKK+IA FKIR+G P+GI  TLR   MY+F DR+INL LPR RDF+GVN  SF
Sbjct: 64  QKPVVTRAKKAIAGFKIRQGMPVGIMVTLRSDRMYAFFDRLINLALPRIRDFRGVNPKSF 123

Query: 185 DGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFRE 242
           DG GNYS+G+REQ +FPEI +D+  + RGMD+ I TTA TD+E + LL +MGMPFR+
Sbjct: 124 DGRGNYSLGLREQLIFPEISYDSIDQMRGMDVSIITTATTDEEGRALLKVMGMPFRD 180

[Close]

BLAST of MC05g0375 vs. ExPASy Swiss-Prot
Match: Q5L411 (50S ribosomal protein L5 OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=rplE PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.0e-60
Identity = 109/179 (60.89%), Postives = 141/179 (78.77%), Query Frame = 0


Query: 63  VNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELALI 122
           +NRLK  Y+ ++VP LM +F+Y +I QVPKIEKIV+N G+GDA QN K L++A+ EL LI
Sbjct: 1   MNRLKEKYLNEVVPALMSKFNYKSIMQVPKIEKIVINMGVGDAVQNPKALDSAVEELTLI 60

Query: 123 TGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVNSN 182
            GQRPV TRAKKSIA F++R+G P+G   TLRG  MY FLD++I++ LPR RDF+GV+  
Sbjct: 61  AGQRPVVTRAKKSIAGFRLRQGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFRGVSKK 120

Query: 183 SFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFRE 242
           SFDG GNY++GI+EQ +FPEI +D   K RGMDI I TTA TD+EA+ LLAL+GMPF++
Sbjct: 121 SFDGRGNYTLGIKEQLIFPEIDYDKVNKVRGMDIVIVTTANTDEEARELLALLGMPFQK 179

[Close]

BLAST of MC05g0375 vs. NCBI nr
Match: XP_022147519.1 (50S ribosomal protein L5, chloroplastic [Momordica charantia])

HSP 1 Score: 518 bits (1334), Expect = 5.80e-185
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEA 60
           MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEA
Sbjct: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEA 60

Query: 61  EKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120
           EKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA
Sbjct: 61  EKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120

Query: 121 LITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVN 180
           LITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVN
Sbjct: 121 LITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVN 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFR 240
           SNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFR
Sbjct: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFR 240

Query: 241 ESSGSATLMRKKKLKSHHFDSKSKGRARR 269
           ESSGSATLMRKKKLKSHHFDSKSKGRARR
Sbjct: 241 ESSGSATLMRKKKLKSHHFDSKSKGRARR 269

[Close]

BLAST of MC05g0375 vs. NCBI nr
Match: XP_038878175.1 (50S ribosomal protein L5, chloroplastic [Benincasa hispida])

HSP 1 Score: 476 bits (1226), Expect = 1.68e-168
Identity = 244/269 (90.71%), Postives = 255/269 (94.80%), Query Frame = 0


Query: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEA 60
           MA+SSLLSSA SSFHGH P FS RF AP ACGNPSN+APLAVRVKA+ G +IVLV+KAEA
Sbjct: 1   MASSSLLSSATSSFHGHSPFFSARFAAPIACGNPSNIAPLAVRVKASTGGAIVLVDKAEA 60

Query: 61  EKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120
           EKVNRLKSNY+EKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA
Sbjct: 61  EKVNRLKSNYLEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120

Query: 121 LITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVN 180
            ITGQRPVKTRAKKSIATFKIREGQPLGIA TLRG+VMYSFLDR+INLGLPRTRDFQG+N
Sbjct: 121 SITGQRPVKTRAKKSIATFKIREGQPLGIATTLRGNVMYSFLDRLINLGLPRTRDFQGLN 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFR 240
           SNSFDGHGNYSIGIREQSVFPEIKFDT GKPRGMD+CITTTAETDQEAQRLLALMGMPFR
Sbjct: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFR 240

Query: 241 ESSGSATLMRKKKLKSHHFDSKSKGRARR 269
           ES GS  +MRKKKLKSHHFDSKSKGRARR
Sbjct: 241 ESGGSVAVMRKKKLKSHHFDSKSKGRARR 269

[Close]

BLAST of MC05g0375 vs. NCBI nr
Match: TYK17619.1 (50S ribosomal protein L5 [Cucumis melo var. makuwa])

HSP 1 Score: 469 bits (1207), Expect = 1.42e-165
Identity = 244/271 (90.04%), Postives = 258/271 (95.20%), Query Frame = 0


Query: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKA--AAGDSIVLVEKA 60
           MA+SSLLSS+ SSFHGH P FSVRF AP  CGNPSNVA LAVRVKA  +AG +IVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKA 60

Query: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE 120
           EAEKVNRLKSNYIEKIVPLLMDEFSY+NIHQVPKIEKIVVNCGIGDAQQNAKGL+AAMNE
Sbjct: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNE 120

Query: 121 LALITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQG 180
           LA ITGQRPVKTRAKKSIATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 VNSNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMP 240
           +NS+SFDGHGNYSIGIREQSVFPEIKFDT GKPRGMD+CITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESSGSATLMRKKKLKSHHFDSKSKGRARR 269
           FRES+G+A +MRKKKLKSHHFDSKSKGRARR
Sbjct: 241 FRESAGAAAVMRKKKLKSHHFDSKSKGRARR 271

[Close]

BLAST of MC05g0375 vs. NCBI nr
Match: XP_008438004.1 (PREDICTED: 50S ribosomal protein L5, chloroplastic [Cucumis melo] >KAA0048949.1 50S ribosomal protein L5 [Cucumis melo var. makuwa])

HSP 1 Score: 465 bits (1196), Expect = 6.71e-164
Identity = 243/271 (89.67%), Postives = 257/271 (94.83%), Query Frame = 0


Query: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKA--AAGDSIVLVEKA 60
           MA+SSLLSS+ SSFHGH P FSVRF AP   GNPSNVA LAVRVKA  +AG +IVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFAAPVGFGNPSNVAQLAVRVKALASAGGAIVLVEKA 60

Query: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE 120
           EAEKVNRLKSNYIEKIVPLLMDEFSY+NIHQVPKIEKIVVNCGIGDAQQNAKGL+AAMNE
Sbjct: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNE 120

Query: 121 LALITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQG 180
           LA ITGQRPVKTRAKKSIATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 VNSNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMP 240
           +NS+SFDGHGNYSIGIREQSVFPEIKFDT GKPRGMD+CITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESSGSATLMRKKKLKSHHFDSKSKGRARR 269
           FRES+G+A +MRKKKLKSHHFDSKSKGRARR
Sbjct: 241 FRESAGAAAVMRKKKLKSHHFDSKSKGRARR 271

[Close]

BLAST of MC05g0375 vs. NCBI nr
Match: XP_004133849.1 (50S ribosomal protein L5, chloroplastic [Cucumis sativus] >KGN56524.2 hypothetical protein Csa_011628 [Cucumis sativus])

HSP 1 Score: 463 bits (1192), Expect = 2.73e-163
Identity = 241/271 (88.93%), Postives = 254/271 (93.73%), Query Frame = 0


Query: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAA--GDSIVLVEKA 60
           MA+SSLLSS+ SSFHGH P FSVRF AP  CGNPSNVA L +RVKA A  G +IVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFAAPVGCGNPSNVAQLGMRVKALASTGGAIVLVEKA 60

Query: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE 120
           EAEKVNRLKSNY+EKIVPLLMDEFSY NIHQVPKIEKIVVNCGIGDAQQNAKGLEAA+NE
Sbjct: 61  EAEKVNRLKSNYLEKIVPLLMDEFSYDNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAINE 120

Query: 121 LALITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQG 180
           LA ITGQRPVKTRAKKSIATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 VNSNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMP 240
           +NS+SFDGHGNYSIGIREQSVFPEIKFDT GKPRGMD+CITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESSGSATLMRKKKLKSHHFDSKSKGRARR 269
           FRES G+A +MRKKKLKSHHFDSKSKGRARR
Sbjct: 241 FRESGGAAAVMRKKKLKSHHFDSKSKGRARR 271

[Close]

BLAST of MC05g0375 vs. ExPASy TrEMBL
Match: A0A6J1D186 (50S ribosomal protein L5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016423 PE=3 SV=1)

HSP 1 Score: 518 bits (1334), Expect = 2.81e-185
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEA 60
           MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEA
Sbjct: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEA 60

Query: 61  EKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120
           EKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA
Sbjct: 61  EKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120

Query: 121 LITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVN 180
           LITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVN
Sbjct: 121 LITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVN 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFR 240
           SNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFR
Sbjct: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFR 240

Query: 241 ESSGSATLMRKKKLKSHHFDSKSKGRARR 269
           ESSGSATLMRKKKLKSHHFDSKSKGRARR
Sbjct: 241 ESSGSATLMRKKKLKSHHFDSKSKGRARR 269

[Close]

BLAST of MC05g0375 vs. ExPASy TrEMBL
Match: A0A5D3D3L2 (50S ribosomal protein L5, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004890 PE=3 SV=1)

HSP 1 Score: 469 bits (1207), Expect = 6.85e-166
Identity = 244/271 (90.04%), Postives = 258/271 (95.20%), Query Frame = 0


Query: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKA--AAGDSIVLVEKA 60
           MA+SSLLSS+ SSFHGH P FSVRF AP  CGNPSNVA LAVRVKA  +AG +IVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKA 60

Query: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE 120
           EAEKVNRLKSNYIEKIVPLLMDEFSY+NIHQVPKIEKIVVNCGIGDAQQNAKGL+AAMNE
Sbjct: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNE 120

Query: 121 LALITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQG 180
           LA ITGQRPVKTRAKKSIATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 VNSNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMP 240
           +NS+SFDGHGNYSIGIREQSVFPEIKFDT GKPRGMD+CITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESSGSATLMRKKKLKSHHFDSKSKGRARR 269
           FRES+G+A +MRKKKLKSHHFDSKSKGRARR
Sbjct: 241 FRESAGAAAVMRKKKLKSHHFDSKSKGRARR 271

[Close]

BLAST of MC05g0375 vs. ExPASy TrEMBL
Match: A0A5A7U637 (50S ribosomal protein L5, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001700 PE=3 SV=1)

HSP 1 Score: 465 bits (1196), Expect = 3.25e-164
Identity = 243/271 (89.67%), Postives = 257/271 (94.83%), Query Frame = 0


Query: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKA--AAGDSIVLVEKA 60
           MA+SSLLSS+ SSFHGH P FSVRF AP   GNPSNVA LAVRVKA  +AG +IVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFAAPVGFGNPSNVAQLAVRVKALASAGGAIVLVEKA 60

Query: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE 120
           EAEKVNRLKSNYIEKIVPLLMDEFSY+NIHQVPKIEKIVVNCGIGDAQQNAKGL+AAMNE
Sbjct: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNE 120

Query: 121 LALITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQG 180
           LA ITGQRPVKTRAKKSIATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 VNSNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMP 240
           +NS+SFDGHGNYSIGIREQSVFPEIKFDT GKPRGMD+CITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESSGSATLMRKKKLKSHHFDSKSKGRARR 269
           FRES+G+A +MRKKKLKSHHFDSKSKGRARR
Sbjct: 241 FRESAGAAAVMRKKKLKSHHFDSKSKGRARR 271

[Close]

BLAST of MC05g0375 vs. ExPASy TrEMBL
Match: A0A1S3AVB4 (50S ribosomal protein L5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483250 PE=3 SV=1)

HSP 1 Score: 465 bits (1196), Expect = 3.25e-164
Identity = 243/271 (89.67%), Postives = 257/271 (94.83%), Query Frame = 0


Query: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKA--AAGDSIVLVEKA 60
           MA+SSLLSS+ SSFHGH P FSVRF AP   GNPSNVA LAVRVKA  +AG +IVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFAAPVGFGNPSNVAQLAVRVKALASAGGAIVLVEKA 60

Query: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE 120
           EAEKVNRLKSNYIEKIVPLLMDEFSY+NIHQVPKIEKIVVNCGIGDAQQNAKGL+AAMNE
Sbjct: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNE 120

Query: 121 LALITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQG 180
           LA ITGQRPVKTRAKKSIATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 VNSNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMP 240
           +NS+SFDGHGNYSIGIREQSVFPEIKFDT GKPRGMD+CITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESSGSATLMRKKKLKSHHFDSKSKGRARR 269
           FRES+G+A +MRKKKLKSHHFDSKSKGRARR
Sbjct: 241 FRESAGAAAVMRKKKLKSHHFDSKSKGRARR 271

[Close]

BLAST of MC05g0375 vs. ExPASy TrEMBL
Match: A0A6J1ECQ6 (50S ribosomal protein L5, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431985 PE=3 SV=1)

HSP 1 Score: 459 bits (1182), Expect = 4.11e-162
Identity = 236/269 (87.73%), Postives = 255/269 (94.80%), Query Frame = 0


Query: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEA 60
           MA+SS+LSSA SSFHGH PL S RFPAP A G PS VAPL+VRVKA+ G +IVLVEKAEA
Sbjct: 1   MASSSMLSSAMSSFHGHSPLVSARFPAPTALGYPSIVAPLSVRVKASTGGAIVLVEKAEA 60

Query: 61  EKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120
           EKVNRLKSNY+EKIVP+LMDEFSY+NIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA
Sbjct: 61  EKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120

Query: 121 LITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVN 180
            ITGQRPVKTRAKK+IATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG+N
Sbjct: 121 SITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLN 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFR 240
           SNSFDGHGNYSIGIREQSVFPEIKFDT  +PRGMD+CITTTAETDQEAQRLLALMGMPFR
Sbjct: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMPFR 240

Query: 241 ESSGSATLMRKKKLKSHHFDSKSKGRARR 269
           ES+G+A+ +RKKKLKSHHFDSKSKGR+RR
Sbjct: 241 ESAGAASGLRKKKLKSHHFDSKSKGRSRR 269

[Close]

BLAST of MC05g0375 vs. TAIR 10
Match: AT4G01310.1 (Ribosomal L5P family protein )

HSP 1 Score: 341.3 bits (874), Expect = 7.2e-94
Identity = 175/268 (65.30%), Postives = 212/268 (79.10%), Query Frame = 0


Query: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEA 60
           MA+ SLL S+ASSFHG       RF    A  +   ++P    V   +    VLVEK+EA
Sbjct: 1   MASPSLLQSSASSFHG-------RFSPLAAPSSARMLSPPLRNVVKVSASGTVLVEKSEA 60

Query: 61  EKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120
           EK  RLK+ Y+E+I+P L +EF Y NIHQVPK++KIVVNCGIGDA QN KGLEAAM ++A
Sbjct: 61  EKTQRLKTAYLERIIPALKEEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIA 120

Query: 121 LITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVN 180
           LITGQ+P+KTRA+ SIATFKIRE QPLGIA TLRG VMYSFLDR+INL LPRTRDFQGV+
Sbjct: 121 LITGQKPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVS 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFR 240
            +SFDG+GNYSIG+++Q VFPEI+FD  GK RGMD+CI+TTA++DQE Q+LLALMGMPFR
Sbjct: 181 PSSFDGNGNYSIGVKDQGVFPEIRFDAVGKTRGMDVCISTTAKSDQEGQKLLALMGMPFR 240

Query: 241 ESSGSAT--LMRKKKLKSHHFDSKSKGR 267
           E  G +T  ++RKKKLKSHHFD+K KG+
Sbjct: 241 EGGGGSTGAIVRKKKLKSHHFDAKGKGK 261

[Close]

BLAST of MC05g0375 vs. TAIR 10
Match: AT2G42740.1 (ribosomal protein large subunit 16A )

HSP 1 Score: 47.0 bits (110), Expect = 2.8e-05
Identity = 34/127 (26.77%), Postives = 64/127 (50.39%), Query Frame = 0


Query: 92  KIEKIVVNCGIGDAQQNAKGLEAAMNELALITGQRPVKTRAKKSIATFKIREGQPLGIAA 151
           K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    
Sbjct: 15  KVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYV 74

Query: 152 TLRGSVMYSFLDRVINLGLPRTRDFQGVNSNSFDGHGNYSIGIREQSVFPEIKFDTFGKP 211
           T+RG      L+     GL + ++++ +  N F   G +  GI+E  +   IK+D     
Sbjct: 75  TVRGEKAMQLLES----GL-KVKEYELLRRN-FSDTGCFGFGIQEH-IDLGIKYDPSTGI 131

Query: 212 RGMDICI 219
            GMD  +
Sbjct: 135 YGMDFYV 131

[Close]

BLAST of MC05g0375 vs. TAIR 10
Match: AT3G58700.1 (Ribosomal L5P family protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.8e-05
Identity = 34/127 (26.77%), Postives = 64/127 (50.39%), Query Frame = 0


Query: 92  KIEKIVVNCGIGDAQQNAKGLEAAMNELALITGQRPVKTRAKKSIATFKIREGQPLGIAA 151
           K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    
Sbjct: 15  KVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYV 74

Query: 152 TLRGSVMYSFLDRVINLGLPRTRDFQGVNSNSFDGHGNYSIGIREQSVFPEIKFDTFGKP 211
           T+RG      L+     GL + ++++ +  N F   G +  GI+E  +   IK+D     
Sbjct: 75  TVRGEKAMQLLES----GL-KVKEYELLRRN-FSDTGCFGFGIQEH-IDLGIKYDPSTGI 131

Query: 212 RGMDICI 219
            GMD  +
Sbjct: 135 YGMDFYV 131

[Close]

BLAST of MC05g0375 vs. TAIR 10
Match: AT4G18730.1 (ribosomal protein L16B )

HSP 1 Score: 47.0 bits (110), Expect = 2.8e-05
Identity = 34/127 (26.77%), Postives = 64/127 (50.39%), Query Frame = 0


Query: 92  KIEKIVVNCGIGDAQQNAKGLEAAMNELALITGQRPVKTRAKKSIATFKIREGQPLGIAA 151
           K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    
Sbjct: 15  KVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYV 74

Query: 152 TLRGSVMYSFLDRVINLGLPRTRDFQGVNSNSFDGHGNYSIGIREQSVFPEIKFDTFGKP 211
           T+RG      L+     GL + ++++ +  N F   G +  GI+E  +   IK+D     
Sbjct: 75  TVRGEKAMQLLES----GL-KVKEYELLRRN-FSDTGCFGFGIQEH-IDLGIKYDPSTGI 131

Query: 212 RGMDICI 219
            GMD  +
Sbjct: 135 YGMDFYV 131

[Close]

BLAST of MC05g0375 vs. TAIR 10
Match: AT5G45775.1 (Ribosomal L5P family protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.8e-05
Identity = 34/127 (26.77%), Postives = 64/127 (50.39%), Query Frame = 0


Query: 92  KIEKIVVNCGIGDAQQNAKGLEAAMNELALITGQRPVKTRAKKSIATFKIREGQPLGIAA 151
           K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    
Sbjct: 5   KVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYV 64

Query: 152 TLRGSVMYSFLDRVINLGLPRTRDFQGVNSNSFDGHGNYSIGIREQSVFPEIKFDTFGKP 211
           T+RG      L+     GL + ++++ +  N F   G +  GI+E  +   IK+D     
Sbjct: 65  TVRGEKAMQLLES----GL-KVKEYELLRRN-FSDTGCFGFGIQEH-IDLGIKYDPSTGI 121

Query: 212 RGMDICI 219
            GMD  +
Sbjct: 125 YGMDFYV 121

The following BLAST results are available for this feature:

BLAST of MC05g0375 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82192	4.1e-94	70.30	50S ribosomal protein L5, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL5 PE=...	[more]
O04603	1.0e-92	65.30	50S ribosomal protein L5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL5 ...	[more]
Q9ZST0	2.2e-79	60.08	50S ribosomal protein L5, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]
B8HMR6	2.7e-61	62.71	50S ribosomal protein L5 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395...	[more]
Q5L411	3.0e-60	60.89	50S ribosomal protein L5 OS=Geobacillus kaustophilus (strain HTA426) OX=235909 G...	[more]

BLAST of MC05g0375 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147519.1	5.80e-185	100.00	50S ribosomal protein L5, chloroplastic [Momordica charantia]	[more]
XP_038878175.1	1.68e-168	90.71	50S ribosomal protein L5, chloroplastic [Benincasa hispida]	[more]
TYK17619.1	1.42e-165	90.04	50S ribosomal protein L5 [Cucumis melo var. makuwa]	[more]
XP_008438004.1	6.71e-164	89.67	PREDICTED: 50S ribosomal protein L5, chloroplastic [Cucumis melo] >KAA0048949.1 ...	[more]
XP_004133849.1	2.73e-163	88.93	50S ribosomal protein L5, chloroplastic [Cucumis sativus] >KGN56524.2 hypothetic...	[more]

BLAST of MC05g0375 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D186	2.81e-185	100.00	50S ribosomal protein L5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A5D3D3L2	6.85e-166	90.04	50S ribosomal protein L5, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7U637	3.25e-164	89.67	50S ribosomal protein L5, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3AVB4	3.25e-164	89.67	50S ribosomal protein L5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483250 ...	[more]
A0A6J1ECQ6	4.11e-162	87.73	50S ribosomal protein L5, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of MC05g0375 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01310.1	7.2e-94	65.30	Ribosomal L5P family protein	[more]
AT2G42740.1	2.8e-05	26.77	ribosomal protein large subunit 16A	[more]
AT3G58700.1	2.8e-05	26.77	Ribosomal L5P family protein	[more]
AT4G18730.1	2.8e-05	26.77	ribosomal protein L16B	[more]
AT5G45775.1	2.8e-05	26.77	Ribosomal L5P family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031310	Ribosomal protein L5, N-terminal	PFAM	PF00281	Ribosomal_L5	coord: 86..142 e-value: 2.5E-26 score: 91.7
IPR031309	Ribosomal protein L5, C-terminal	PFAM	PF00673	Ribosomal_L5_C	coord: 146..239 e-value: 1.1E-32 score: 112.1
IPR022803	Ribosomal protein L5 domain superfamily	GENE3D	3.30.1440.10		coord: 57..242 e-value: 8.5E-75 score: 252.3
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 65..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..269
None	No IPR available	PANTHER	PTHR11994:SF4	54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL	coord: 59..241
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 59..241
IPR020929	Ribosomal protein L5, conserved site	PROSITE	PS00358	RIBOSOMAL_L5	coord: 119..135
IPR020930	Ribosomal protein L5, bacterial-type	HAMAP	MF_01333_B	Ribosomal_L5_B	coord: 63..241 score: 40.821007

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0375.1	MC05g0375.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome