MC05g0345 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0345
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	UvrABC system protein A
Location	MC05: 2601863 .. 2603266 (+)
RNA-Seq Expression	MC05g0345
Synteny	MC05g0345

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAATCCGCGAACAGACAAGCTGCTGAGAAGAACAACTATGGTGGCCACGGTTACTGCTTCATACTTTCTCTTAACCGCCGACTATGGCCCTCAACCCAATTTTCTCGATCCCGTGAGTCCTCTAAACATGTCTCCCTGATAATTTCTGTTATCTGTTTGGTTGCAATGAAAATCCTTGCAAAAACTAGTAGGTTCTTCGATTTTTAGTAGGCTAATTTGTAAGTTGATTGTCTTTTACTTCTTAGCAATCCAGGGATTGTTTTTGTGCAATGTAATTGCGGATTAATGCTATTGCTTGCAGTTACTTTTCTGTGTTTTGTTTTTCCTATGGTGCTATACTTTACTATATTTTGGAATCCTTTATCGAGCAATTGACTAACTTCCTTTTATTAATAATTTTCTCAAGCGAAAGATGAATTGCGTTTGCAGTGACTTCTTTTTCATTGATTAGTGTAGTTCAAGATTTGGGGCTGATTTCCAGTTGTATTTCTTGTCAGTTTTACTTTTAGTTCAGTTTTTTGTAATCAGTGTCTAATTCGTTGTATATTTTCCCTTTTACTTGATTTTATTGTGTAGAACTTAGGTTTTCTACATTCTGTATTGGACCTGTTTCGGCCCGCTTACAAACGGGATTGATTGTTGTTTAATACAGTGTTAGTTTATTATACTTGTATCTATTGTAATTGTAAATCTGTTGAGTCTTTAACTCCTCACTGCATTAAGTATAAATTAGCTGAAAAATATTCGAATACGCTTTAAATTGCTCAGGAAGAATATTTATGTTCACTGATCTCTAATGAGAGCAATCTGTAGTTTGTGGGTTCATATTCACTTTGGCGAATTACTATTTTTTGTTCTTGTTTTCAATTTTAGAGTCATAACTTTCGATGAAGTTCCGGTCTGGCTAGATTCGTCTATCACGCATAATCTCTTGCTATTGCGATAAGATATGAGAACTAAGAATGAAGAGTGAAGTTACCCTTTCTATTCAGTTAGAAGCAAGAATTCCTAGCATTTAGCAAATTAATAGTGTAAGTTTAAGTGACAAGTTAACATGATTTTACTTCTAAAGTAAAATCAAACAACTGTAAAGCATTGGACGTTCCCATTACTTTCTACATTGGAAACTTTGATGCTGCCGTGAATCTGTATGCATAAAATAATATTCATTTAGTGATCTGCCGGATTTTATATGCTTGATTGGTGTTTGATCGAATTTCCAGCTTTATAGAAACGTACATATTGTTTTGGATTCTAATGGCATAATTTGGGATGGCAGATCAAAAAGTTTATACTGTCAGCAGAAAGTTCTGTTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGAAAGTCAAAGAGAGAAGCTGGGCTCCAATGGTGTCAAGGACCAACCG

mRNA sequence

ATGGTGAATCCGCGAACAGACAAGCTGCTGAGAAGAACAACTATGGTGGCCACGGTTACTGCTTCATACTTTCTCTTAACCGCCGACTATGGCCCTCAACCCAATTTTCTCGATCCCATCAAAAAGTTTATACTGTCAGCAGAAAGTTCTGTTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGAAAGTCAAAGAGAGAAGCTGGGCTCCAATGGTGTCAAGGACCAACCG

Coding sequence (CDS)

ATGGTGAATCCGCGAACAGACAAGCTGCTGAGAAGAACAACTATGGTGGCCACGGTTACTGCTTCATACTTTCTCTTAACCGCCGACTATGGCCCTCAACCCAATTTTCTCGATCCCATCAAAAAGTTTATACTGTCAGCAGAAAGTTCTGTTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGAAAGTCAAAGAGAGAAGCTGGGCTCCAATGGTGTCAAGGACCAACCG

Protein sequence

MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSVKGFIFGSNNQSQESQREKLGSNGVKDQP

Homology

[Close]

BLAST of MC05g0345 vs. NCBI nr
Match: XP_022147242.1 (uncharacterized protein LOC111016239 [Momordica charantia])

HSP 1 Score: 154 bits (389), Expect = 4.55e-47
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSVKGFIFGSNN 60
          MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPI+KFILSAESSVKGFIFGSNN
Sbjct: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIQKFILSAESSVKGFIFGSNN 60

Query: 61 QSQESQREKLGSNGVKDQP 79
          QSQESQREKLGSNGVKDQP
Sbjct: 61 QSQESQREKLGSNGVKDQP 79

[Close]

BLAST of MC05g0345 vs. NCBI nr
Match: XP_022924545.1 (uncharacterized protein LOC111431996 [Cucurbita moschata] >XP_022980455.1 uncharacterized protein LOC111479819 [Cucurbita maxima] >XP_023529151.1 uncharacterized protein LOC111791881 [Cucurbita pepo subsp. pepo] >KAG6582608.1 hypothetical protein SDJN03_22610, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018999.1 hypothetical protein SDJN02_20876 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147 bits (370), Expect = 3.61e-44
Identity = 74/79 (93.67%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSVKGFIFGSNN 60
          MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILS ESS+KGFIFGSNN
Sbjct: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 60

Query: 61 QSQESQREKLGSNGVKDQP 79
          QSQ SQ EKLGSNGVKD P
Sbjct: 61 QSQGSQSEKLGSNGVKDNP 79

[Close]

BLAST of MC05g0345 vs. NCBI nr
Match: XP_008438057.1 (PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo])

HSP 1 Score: 144 bits (362), Expect = 6.01e-43
Identity = 72/77 (93.51%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSVKGFIFGSNN 60
          MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILSAESS+KGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60

Query: 61 QSQESQREKLGSNGVKD 77
          QSQE QREKLGSNGVKD
Sbjct: 61 QSQEGQREKLGSNGVKD 77

[Close]

BLAST of MC05g0345 vs. NCBI nr
Match: XP_011650756.1 (uncharacterized protein LOC105434815 [Cucumis sativus] >KGN56522.1 hypothetical protein Csa_010552 [Cucumis sativus])

HSP 1 Score: 143 bits (361), Expect = 8.54e-43
Identity = 72/77 (93.51%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSVKGFIFGSNN 60
          MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILSAESS+KGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKVILSAESSIKGFIFGSNN 60

Query: 61 QSQESQREKLGSNGVKD 77
          QSQE QREKLGSNGVKD
Sbjct: 61 QSQEGQREKLGSNGVKD 77

[Close]

BLAST of MC05g0345 vs. NCBI nr
Match: XP_038906565.1 (uncharacterized protein LOC120092525 [Benincasa hispida] >XP_038906569.1 uncharacterized protein LOC120092525 [Benincasa hispida] >XP_038906579.1 uncharacterized protein LOC120092525 [Benincasa hispida])

HSP 1 Score: 143 bits (360), Expect = 1.21e-42
Identity = 73/79 (92.41%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSVKGFIFGSNN 60
          MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESS+KGFIFGSN 
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSMKGFIFGSNK 60

Query: 61 QSQESQREKLGSNGVKDQP 79
           SQESQ EKLGSNGVKD P
Sbjct: 61 HSQESQTEKLGSNGVKDNP 79

[Close]

BLAST of MC05g0345 vs. ExPASy TrEMBL
Match: A0A6J1D1U5 (uncharacterized protein LOC111016239 OS=Momordica charantia OX=3673 GN=LOC111016239 PE=4 SV=1)

HSP 1 Score: 154 bits (389), Expect = 2.20e-47
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSVKGFIFGSNN 60
          MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPI+KFILSAESSVKGFIFGSNN
Sbjct: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIQKFILSAESSVKGFIFGSNN 60

Query: 61 QSQESQREKLGSNGVKDQP 79
          QSQESQREKLGSNGVKDQP
Sbjct: 61 QSQESQREKLGSNGVKDQP 79

[Close]

BLAST of MC05g0345 vs. ExPASy TrEMBL
Match: A0A6J1IWD0 (uncharacterized protein LOC111479819 OS=Cucurbita maxima OX=3661 GN=LOC111479819 PE=4 SV=1)

HSP 1 Score: 147 bits (370), Expect = 1.75e-44
Identity = 74/79 (93.67%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSVKGFIFGSNN 60
          MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILS ESS+KGFIFGSNN
Sbjct: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 60

Query: 61 QSQESQREKLGSNGVKDQP 79
          QSQ SQ EKLGSNGVKD P
Sbjct: 61 QSQGSQSEKLGSNGVKDNP 79

[Close]

BLAST of MC05g0345 vs. ExPASy TrEMBL
Match: A0A6J1EFB9 (uncharacterized protein LOC111431996 OS=Cucurbita moschata OX=3662 GN=LOC111431996 PE=4 SV=1)

HSP 1 Score: 147 bits (370), Expect = 1.75e-44
Identity = 74/79 (93.67%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSVKGFIFGSNN 60
          MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILS ESS+KGFIFGSNN
Sbjct: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 60

Query: 61 QSQESQREKLGSNGVKDQP 79
          QSQ SQ EKLGSNGVKD P
Sbjct: 61 QSQGSQSEKLGSNGVKDNP 79

[Close]

BLAST of MC05g0345 vs. ExPASy TrEMBL
Match: A0A1S3AW35 (uncharacterized protein LOC103483279 OS=Cucumis melo OX=3656 GN=LOC103483279 PE=4 SV=1)

HSP 1 Score: 144 bits (362), Expect = 2.91e-43
Identity = 72/77 (93.51%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSVKGFIFGSNN 60
          MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILSAESS+KGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60

Query: 61 QSQESQREKLGSNGVKD 77
          QSQE QREKLGSNGVKD
Sbjct: 61 QSQEGQREKLGSNGVKD 77

[Close]

BLAST of MC05g0345 vs. ExPASy TrEMBL
Match: A0A0A0L7H0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122460 PE=4 SV=1)

HSP 1 Score: 143 bits (361), Expect = 4.14e-43
Identity = 72/77 (93.51%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSVKGFIFGSNN 60
          MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILSAESS+KGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKVILSAESSIKGFIFGSNN 60

Query: 61 QSQESQREKLGSNGVKD 77
          QSQE QREKLGSNGVKD
Sbjct: 61 QSQEGQREKLGSNGVKD 77

[Close]

BLAST of MC05g0345 vs. TAIR 10
Match: AT4G00530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01725.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 88.6 bits (218), Expect = 2.5e-18
Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 2  VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSVKGFIFGSNNQ 61
          +NP+TDK++RRTTMVAT  ASYFLLT DYGP+PN LDPIK+ IL+A+ SVK FIFG   +
Sbjct: 1  MNPQTDKVVRRTTMVATAVASYFLLTGDYGPEPNVLDPIKRKILAAQDSVKQFIFGPKGE 60

[Close]

BLAST of MC05g0345 vs. TAIR 10
Match: AT1G01725.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00530.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 3.7e-14
Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 0


Query: 2  VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSVKGFIFGSNNQ 61
          +NP+ +K+++ T++VAT   SYFLLTADYGP+PN LDPI++ ILSA+ SVK FIF S   
Sbjct: 1  MNPQIEKVVKVTSVVATAVVSYFLLTADYGPEPNALDPIRQRILSAQDSVKEFIFPSKKS 60

Query: 62 SQ 64
           +
Sbjct: 61 DK 62

The following BLAST results are available for this feature:

BLAST of MC05g0345 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g0345 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147242.1	4.55e-47	98.73	uncharacterized protein LOC111016239 [Momordica charantia]	[more]
XP_022924545.1	3.61e-44	93.67	uncharacterized protein LOC111431996 [Cucurbita moschata] >XP_022980455.1 unchar...	[more]
XP_008438057.1	6.01e-43	93.51	PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo]	[more]
XP_011650756.1	8.54e-43	93.51	uncharacterized protein LOC105434815 [Cucumis sativus] >KGN56522.1 hypothetical ...	[more]
XP_038906565.1	1.21e-42	92.41	uncharacterized protein LOC120092525 [Benincasa hispida] >XP_038906569.1 unchara...	[more]

BLAST of MC05g0345 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1U5	2.20e-47	98.73	uncharacterized protein LOC111016239 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1IWD0	1.75e-44	93.67	uncharacterized protein LOC111479819 OS=Cucurbita maxima OX=3661 GN=LOC111479819...	[more]
A0A6J1EFB9	1.75e-44	93.67	uncharacterized protein LOC111431996 OS=Cucurbita moschata OX=3662 GN=LOC1114319...	[more]
A0A1S3AW35	2.91e-43	93.51	uncharacterized protein LOC103483279 OS=Cucumis melo OX=3656 GN=LOC103483279 PE=...	[more]
A0A0A0L7H0	4.14e-43	93.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122460 PE=4 SV=1	[more]

BLAST of MC05g0345 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00530.1	2.5e-18	68.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G01725.1	3.7e-14	56.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..79
None	No IPR available	PANTHER	PTHR37696	ADENYLOSUCCINATE SYNTHETASE-RELATED	coord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0345.1	MC05g0345.1	mRNA