MC05g0333 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0333
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	LIM domain-containing protein PLIM2c-like
Location	MC05: 2521710 .. 2523519 (+)
RNA-Seq Expression	MC05g0333
Synteny	MC05g0333

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATTTTGTATAGAAAAAACACTTAATCCCAACATATTATGATGTATTTAAATTTGGTTTCTTTACACACAAATCCAAAGACTTTCATTGTGTCCCATTACACCTTTTTTTTTTGTATATAATTTTGTCTGAGATCTGATCCTCAGACAACTTGATAAACATTGTATTTGTTTGTTTGTTGTTTTGGTTCTCCCCCCTTCTGTTTTTGCAGTTTCTCGTTCGTGTTTCGGGTTCGAGTCGTTCTCGTAGAAGAGGAATAAAGATGTCATTCACAGGAACTTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGATTTGCTTTCCCTTGAAGGGAATCCTTACCATAAGTCCTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCCGTATGTCTTTCTGTAACTCTATTTACGTATCGGTTTCAACAAACGACGACGAGTCGTTCGTTTGTCATACCGGATCTGACCCGAGTTGTTTACGACAGATGAGTAGCTACTCGTGGATGGACGGTGTCCTGTACTGCAAGCCTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAACTTGTAAAATACTTATTCCCATCTGATCTCTCTATTTTCTCCTTTTATGTTTTTTTCCTTTTTATTTTCTTGTCTTTCTAACATTCTATCATTTCCATAATTAATATAGCCAAGCCTTCTGAGAAGCAAAATGATCTGGTATGCTCCATCTACCCGAGACGTTCATTTTTGTATTCGTTTGATGACGATTTTATTTTTAGCATTATCCATTAAACACTAGATCTAGGTAGTGATTTAGCATTATAAGCGAGAACAGATTTCAACGTTATACTCTCGAATGCGCATTTAAAATTCCGAAATCTTTGACAGTCGAGGGCCCCTAGCAAACTCTCCTCCATGTTCTGTGGAACTCAAGACAAATGTGCGGTCTGCACAAAAACGGTTTATCCGTTGGAGAAGGTCTTTACTTCTCCTTCCTCTTTTTTGTGATTTTCATAGAATGTTACTATCAATATTCATGGATTGCAACGAGAAGAGCATCCCATCTATATTATAAACTTTCGTCGGGTTCTTTTATAACGTGAGATCTTTAATATACCCCTCAAGATGATGACTCTTTTGGACTAACTAGTCTTGGTCGGATTCTATTTTTGGCTTGGATGCTCGTTTGACCTCTCATTTTCTAAAACAGGTGACTCTTGAGGGGGAAAGCTACCACAAGACATGCTTTAGATGTGCTCATGGTGGCTGCAATTTGACCCACTCTAATGCTGCTGCTCTTGATGGAGTGTTGTACTGTAAGCACCATTTTGCTCAGCTGTTCATGGTGAAAGGAAACTACAACCATGTCCTTCAAGCTGCTGCAAACAAGAAGGCCTCCACACCGCCTCCTGAACCAGCGGACGAGGAGGCCGAGCCTCGGACGAAGGCCGAGGACAATGACGTAGAGGAGTCTTAAAGTGCAGCTTCTGCTCACTCCAACCTTTGAGAGAATCCTTGTCTTTGTGTTTTTATCTACAGTTTTCCTTTTCCCTTTTTGGCTTTCAAGTTCATTTTGTAACAAGTTTCATTACCATCTTCAGTTTTTTAAGGTAATTCAGAACATTTATTTAGTGAGAGGAGAGCTGGATAATAAAGCATACATTGCTATAATTCCCCATCACTAAAGGGAATTTTCCTTTTTCTTCAAAAATATGTTGTCTCCTTCATTTTCTTCTTTAGTATTACAATTCATTAGACGTCGGGTTTTGAATCCACGAGATTACTAATGTCTTAAC

mRNA sequence

CCCATTTTGTATAGAAAAAACACTTAATCCCAACATATTATGATGTATTTAAATTTGGTTTCTTTACACACAAATCCAAAGACTTTCATTGTGTCCCATTACACCTTTTTTTTTTGTATATAATTTTGTCTGAGATCTGATCCTCAGACAACTTGATAAACATTGTATTTGTTTGTTTGTTGTTTTGGTTCTCCCCCCTTCTGTTTTTGCAGTTTCTCGTTCGTGTTTCGGGTTCGAGTCGTTCTCGTAGAAGAGGAATAAAGATGTCATTCACAGGAACTTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGATTTGCTTTCCCTTGAAGGGAATCCTTACCATAAGTCCTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCCATGAGTAGCTACTCGTGGATGGACGGTGTCCTGTACTGCAAGCCTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAACTTCCAAGCCTTCTGAGAAGCAAAATGATCTGTCGAGGGCCCCTAGCAAACTCTCCTCCATGTTCTGTGGAACTCAAGACAAATGTGCGGTCTGCACAAAAACGGTTTATCCGTTGGAGAAGGTGACTCTTGAGGGGGAAAGCTACCACAAGACATGCTTTAGATGTGCTCATGGTGGCTGCAATTTGACCCACTCTAATGCTGCTGCTCTTGATGGAGTGTTGTACTGTAAGCACCATTTTGCTCAGCTGTTCATGGTGAAAGGAAACTACAACCATGTCCTTCAAGCTGCTGCAAACAAGAAGGCCTCCACACCGCCTCCTGAACCAGCGGACGAGGAGGCCGAGCCTCGGACGAAGGCCGAGGACAATGACGTAGAGGAGTCTTAAAGTGCAGCTTCTGCTCACTCCAACCTTTGAGAGAATCCTTGTCTTTGTGTTTTTATCTACAGTTTTCCTTTTCCCTTTTTGGCTTTCAAGTTCATTTTGTAACAAGTTTCATTACCATCTTCAGTTTTTTAAGGTAATTCAGAACATTTATTTAGTGAGAGGAGAGCTGGATAATAAAGCATACATTGCTATAATTCCCCATCACTAAAGGGAATTTTCCTTTTTCTTCAAAAATATGTTGTCTCCTTCATTTTCTTCTTTAGTATTACAATTCATTAGACGTCGGGTTTTGAATCCACGAGATTACTAATGTCTTAAC

Coding sequence (CDS)

ATGTCATTCACAGGAACTTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGATTTGCTTTCCCTTGAAGGGAATCCTTACCATAAGTCCTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCCATGAGTAGCTACTCGTGGATGGACGGTGTCCTGTACTGCAAGCCTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAACTTCCAAGCCTTCTGAGAAGCAAAATGATCTGTCGAGGGCCCCTAGCAAACTCTCCTCCATGTTCTGTGGAACTCAAGACAAATGTGCGGTCTGCACAAAAACGGTTTATCCGTTGGAGAAGGTGACTCTTGAGGGGGAAAGCTACCACAAGACATGCTTTAGATGTGCTCATGGTGGCTGCAATTTGACCCACTCTAATGCTGCTGCTCTTGATGGAGTGTTGTACTGTAAGCACCATTTTGCTCAGCTGTTCATGGTGAAAGGAAACTACAACCATGTCCTTCAAGCTGCTGCAAACAAGAAGGCCTCCACACCGCCTCCTGAACCAGCGGACGAGGAGGCCGAGCCTCGGACGAAGGCCGAGGACAATGACGTAGAGGAGTCTTAA

Protein sequence

MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVTLEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKASTPPPEPADEEAEPRTKAEDNDVEES

Homology

[Close]

BLAST of MC05g0333 vs. ExPASy Swiss-Prot
Match: Q500W4 (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 4.3e-83
Identity = 148/204 (72.55%), Postives = 171/204 (83.82%), Query Frame = 0


Query: 2   SFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPH 61
           +FTGT DKCKACDKTVYV+DL++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCK H
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVTL 121
           FEQLFKESGNFSKNFQT+  +EK ND ++AP++LSS F GTQDKCA C KTVYPLEK+T+
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAS 181
           EGESYHKTCFRCAH GC LTHS+ AALDGVLYCK HF+QLF+ KGNYNHVLQAAAN + S
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

Query: 182 T---PPPEPADEEAEPRTKAEDND 203
           T      EP ++EA P T+ E +D
Sbjct: 183 TAEEDKTEPKEDEANP-TEEETSD 205

[Close]

BLAST of MC05g0333 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 2.3e-81
Identity = 146/209 (69.86%), Postives = 170/209 (81.34%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKC  CDKTVYVVD+LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ  K   ++ +L+R PSK+SS+FCGTQDKCA C KTVYPLEK+ 
Sbjct: 61  HFEQLFKESGNFSKNFQPGK--TEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQ 120

Query: 121 LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKK- 180
           +EGE +HKTCFRCAHGGC LTHS+ A+LD VLYC+HHF QLFM KGNY HVLQAA +++ 
Sbjct: 121 MEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRT 180

Query: 181 --ASTPPPEPADEEAEPRTKAEDNDVEES 207
              +T PPEP ++ A      E+N V ES
Sbjct: 181 ASGNTLPPEPTEDVAV--EAKEENGVSES 205

[Close]

BLAST of MC05g0333 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 6.8e-81
Identity = 146/209 (69.86%), Postives = 167/209 (79.90%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYV+DLL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGN+SKNFQ  K  +  + L+R PSKLSS F GTQDKCA C KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180
           +EGESYHKTCFRC H GC LTHS+ A+L+GVLYCK HF QLF+ KG+YNHV QAAAN + 
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180

Query: 181 S------TPPPE---PADEEAEPRTKAED 201
           S      +PP +   P D  + P  K +D
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKEDD 209

[Close]

BLAST of MC05g0333 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.4e-70
Identity = 119/184 (64.67%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KC+AC+KTVY V+LLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKP--SEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ +KP   +   +L+R PS+L+ MF GTQDKCA CTKTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAAN 180
           KVT+E + YHK+CF+C+HGGC ++ SN AAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKAS 182
           K+A+
Sbjct: 181 KRAT 184

[Close]

BLAST of MC05g0333 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.4e-70
Identity = 129/200 (64.50%), Postives = 152/200 (76.00%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT DKC ACDKTV+ +DLL+ +G PYHK+CFKCSHCKG LSM SYS MDGVLYCK 
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKE+G+FSK F     S    +L+RAPSK+ S F GTQDKCA C KTVYPLEK+T
Sbjct: 61  HFEQLFKETGSFSKKFAPGCRS-TDKELARAPSKICSAFSGTQDKCAACQKTVYPLEKLT 120

Query: 121 LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180
           LEGESYHK+CF+C+HGGC LT S+ AAL+GVLYCK HF QLFM KG+YNH+ + + +++ 
Sbjct: 121 LEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSESQEV 180

Query: 181 -------STPPPEPADEEAE 194
                    P P P DE  E
Sbjct: 181 LPEVVPEEQPAPPPPDENRE 199

[Close]

BLAST of MC05g0333 vs. NCBI nr
Match: XP_022147448.1 (LIM domain-containing protein PLIM2c-like [Momordica charantia])

HSP 1 Score: 431 bits (1107), Expect = 1.84e-152
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT 120

Query: 121 LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180
           LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA
Sbjct: 121 LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180

Query: 181 STPPPEPADEEAEPRTKAEDNDVEES 206
           STPPPEPADEEAEPRTKAEDNDVEES
Sbjct: 181 STPPPEPADEEAEPRTKAEDNDVEES 206

[Close]

BLAST of MC05g0333 vs. NCBI nr
Match: XP_022147508.1 (LIM domain-containing protein PLIM2c-like [Momordica charantia] >XP_022147509.1 LIM domain-containing protein PLIM2c-like [Momordica charantia])

HSP 1 Score: 405 bits (1042), Expect = 1.50e-142
Identity = 191/206 (92.72%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGNFSKNF  SKPSEKQNDL+RAPSKLSSMF GTQDKC+VC+KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFHASKPSEKQNDLTRAPSKLSSMFSGTQDKCSVCSKTVYPLEKVT 120

Query: 121 LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180
           LEGE YHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA
Sbjct: 121 LEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180

Query: 181 STPPPEPADEEAEPRTKAEDNDVEES 206
           STPPPEPAD+EAEP+ ++ED+DVE+S
Sbjct: 181 STPPPEPADDEAEPQAQSEDHDVEQS 206

[Close]

BLAST of MC05g0333 vs. NCBI nr
Match: XP_008438078.1 (PREDICTED: LIM domain-containing protein PLIM2c-like [Cucumis melo])

HSP 1 Score: 378 bits (970), Expect = 1.53e-131
Identity = 176/191 (92.15%), Postives = 184/191 (96.34%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVV+LLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ +KPSEKQNDLSRAPSKLSSMF GTQDKCA CTKTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT 120

Query: 121 LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180
           LEGE YHK CFRCAHGGC+LTHS+ AALDGVLYCKHHFAQLFM+KGNYNHVL+AAANKKA
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180

Query: 181 STPPPEPADEE 191
           +TPPPEPA+EE
Sbjct: 181 TTPPPEPAEEE 191

[Close]

BLAST of MC05g0333 vs. NCBI nr
Match: XP_011650764.2 (LIM domain-containing protein PLIM2b isoform X2 [Cucumis sativus])

HSP 1 Score: 375 bits (964), Expect = 1.30e-130
Identity = 175/191 (91.62%), Postives = 183/191 (95.81%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVV+LLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ +KPSEKQNDLSRAPSKLSSMF GTQDKCA C+KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLSRAPSKLSSMFSGTQDKCAACSKTVYPLEKVT 120

Query: 121 LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180
           LEGE YHK CFRCAHGGC+LTHS+ AALDGVLYCKHHFAQLFM+KGNYNHVL+AAANKKA
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180

Query: 181 STPPPEPADEE 191
            TPPPEPA+EE
Sbjct: 181 PTPPPEPAEEE 191

[Close]

BLAST of MC05g0333 vs. NCBI nr
Match: XP_022980412.1 (LIM domain-containing protein PLIM2c-like [Cucurbita maxima])

HSP 1 Score: 375 bits (964), Expect = 1.30e-130
Identity = 176/192 (91.67%), Postives = 186/192 (96.88%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVV+LLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDL-SRAPSKLSSMFCGTQDKCAVCTKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKPSEKQND+ SRAPSKLSSMF GTQDKC+ C+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 TLEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKK 180
           TLEGE YHKTCFRCAHGGCNLTHS+ AALDGVLYCKHHFAQLFM+KGNYNHVL+AAANKK
Sbjct: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ASTPPPEPADEE 191
           A+TPPPE A+E+
Sbjct: 181 ATTPPPESAEED 192

[Close]

BLAST of MC05g0333 vs. ExPASy TrEMBL
Match: A0A6J1D1C3 (LIM domain-containing protein PLIM2c-like OS=Momordica charantia OX=3673 GN=LOC111016371 PE=4 SV=1)

HSP 1 Score: 431 bits (1107), Expect = 8.89e-153
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT 120

Query: 121 LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180
           LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA
Sbjct: 121 LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180

Query: 181 STPPPEPADEEAEPRTKAEDNDVEES 206
           STPPPEPADEEAEPRTKAEDNDVEES
Sbjct: 181 STPPPEPADEEAEPRTKAEDNDVEES 206

[Close]

BLAST of MC05g0333 vs. ExPASy TrEMBL
Match: A0A6J1D1H7 (LIM domain-containing protein PLIM2c-like OS=Momordica charantia OX=3673 GN=LOC111016415 PE=4 SV=1)

HSP 1 Score: 405 bits (1042), Expect = 7.27e-143
Identity = 191/206 (92.72%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGNFSKNF  SKPSEKQNDL+RAPSKLSSMF GTQDKC+VC+KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFHASKPSEKQNDLTRAPSKLSSMFSGTQDKCSVCSKTVYPLEKVT 120

Query: 121 LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180
           LEGE YHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA
Sbjct: 121 LEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180

Query: 181 STPPPEPADEEAEPRTKAEDNDVEES 206
           STPPPEPAD+EAEP+ ++ED+DVE+S
Sbjct: 181 STPPPEPADDEAEPQAQSEDHDVEQS 206

[Close]

BLAST of MC05g0333 vs. ExPASy TrEMBL
Match: A0A1S3AW36 (LIM domain-containing protein PLIM2c-like OS=Cucumis melo OX=3656 GN=LOC103483293 PE=4 SV=1)

HSP 1 Score: 378 bits (970), Expect = 7.40e-132
Identity = 176/191 (92.15%), Postives = 184/191 (96.34%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVV+LLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ +KPSEKQNDLSRAPSKLSSMF GTQDKCA CTKTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT 120

Query: 121 LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180
           LEGE YHK CFRCAHGGC+LTHS+ AALDGVLYCKHHFAQLFM+KGNYNHVL+AAANKKA
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180

Query: 181 STPPPEPADEE 191
           +TPPPEPA+EE
Sbjct: 181 TTPPPEPAEEE 191

[Close]

BLAST of MC05g0333 vs. ExPASy TrEMBL
Match: A0A6J1IRA7 (LIM domain-containing protein PLIM2c-like OS=Cucurbita maxima OX=3661 GN=LOC111479786 PE=4 SV=1)

HSP 1 Score: 375 bits (964), Expect = 6.30e-131
Identity = 176/192 (91.67%), Postives = 186/192 (96.88%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVV+LLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDL-SRAPSKLSSMFCGTQDKCAVCTKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKPSEKQND+ SRAPSKLSSMF GTQDKC+ C+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 TLEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKK 180
           TLEGE YHKTCFRCAHGGCNLTHS+ AALDGVLYCKHHFAQLFM+KGNYNHVL+AAANKK
Sbjct: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ASTPPPEPADEE 191
           A+TPPPE A+E+
Sbjct: 181 ATTPPPESAEED 192

[Close]

BLAST of MC05g0333 vs. ExPASy TrEMBL
Match: A0A6J1E9B9 (LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC111431888 PE=4 SV=1)

HSP 1 Score: 374 bits (959), Expect = 3.64e-130
Identity = 175/192 (91.15%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVV+LLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDL-SRAPSKLSSMFCGTQDKCAVCTKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKPSEKQND+ SRAPSKLSSMF GTQDKC+ C+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 TLEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKK 180
           TLEGE YHK CFRCAHGGCNLTHS+ AALDGVLYCKHHFAQLFM+KGNYNHVL+AAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ASTPPPEPADEE 191
           A+TPPPE A+E+
Sbjct: 181 ATTPPPESAEED 192

[Close]

BLAST of MC05g0333 vs. TAIR 10
Match: AT3G61230.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 308.9 bits (790), Expect = 3.0e-84
Identity = 148/204 (72.55%), Postives = 171/204 (83.82%), Query Frame = 0


Query: 2   SFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPH 61
           +FTGT DKCKACDKTVYV+DL++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCK H
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVTL 121
           FEQLFKESGNFSKNFQT+  +EK ND ++AP++LSS F GTQDKCA C KTVYPLEK+T+
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKAS 181
           EGESYHKTCFRCAH GC LTHS+ AALDGVLYCK HF+QLF+ KGNYNHVLQAAAN + S
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

Query: 182 T---PPPEPADEEAEPRTKAEDND 203
           T      EP ++EA P T+ E +D
Sbjct: 183 TAEEDKTEPKEDEANP-TEEETSD 205

[Close]

BLAST of MC05g0333 vs. TAIR 10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 303.1 bits (775), Expect = 1.7e-82
Identity = 146/209 (69.86%), Postives = 170/209 (81.34%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKC  CDKTVYVVD+LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ  K   ++ +L+R PSK+SS+FCGTQDKCA C KTVYPLEK+ 
Sbjct: 61  HFEQLFKESGNFSKNFQPGK--TEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQ 120

Query: 121 LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKK- 180
           +EGE +HKTCFRCAHGGC LTHS+ A+LD VLYC+HHF QLFM KGNY HVLQAA +++ 
Sbjct: 121 MEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRT 180

Query: 181 --ASTPPPEPADEEAEPRTKAEDNDVEES 207
              +T PPEP ++ A      E+N V ES
Sbjct: 181 ASGNTLPPEPTEDVAV--EAKEENGVSES 205

[Close]

BLAST of MC05g0333 vs. TAIR 10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 301.6 bits (771), Expect = 4.8e-82
Identity = 146/209 (69.86%), Postives = 167/209 (79.90%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYV+DLL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEKVT 120
           HFEQLFKESGN+SKNFQ  K  +  + L+R PSKLSS F GTQDKCA C KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180
           +EGESYHKTCFRC H GC LTHS+ A+L+GVLYCK HF QLF+ KG+YNHV QAAAN + 
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180

Query: 181 S------TPPPE---PADEEAEPRTKAED 201
           S      +PP +   P D  + P  K +D
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKEDD 209

[Close]

BLAST of MC05g0333 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 267.3 bits (682), Expect = 1.0e-71
Identity = 119/184 (64.67%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KC+AC+KTVY V+LLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKP--SEKQNDLSRAPSKLSSMFCGTQDKCAVCTKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ +KP   +   +L+R PS+L+ MF GTQDKCA CTKTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAAN 180
           KVT+E + YHK+CF+C+HGGC ++ SN AAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKAS 182
           K+A+
Sbjct: 181 KRAT 184

[Close]

BLAST of MC05g0333 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 265.8 bits (678), Expect = 2.9e-71
Identity = 117/183 (63.93%), Postives = 156/183 (85.25%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KCKAC+KTVY V+LLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKPSEKQN-DLSRAPSKLSSMFCGTQDKCAVCTKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+ +K ++K   +L+R PS+++  F GTQ+KCA C+KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTLEGESYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANK 180
           VT+E ++YHK+CF+C+HGGC ++ SN AAL+G+LYCKHHFAQLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 KAS 182
           +++
Sbjct: 181 RSA 183

The following BLAST results are available for this feature:

BLAST of MC05g0333 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q500W4	4.3e-83	72.55	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P...	[more]
Q1ECF5	2.3e-81	69.86	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
O80839	6.8e-81	69.86	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
O04193	1.4e-70	64.67	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q7F9R9	2.4e-70	64.50	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of MC05g0333 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147448.1	1.84e-152	100.00	LIM domain-containing protein PLIM2c-like [Momordica charantia]	[more]
XP_022147508.1	1.50e-142	92.72	LIM domain-containing protein PLIM2c-like [Momordica charantia] >XP_022147509.1 ...	[more]
XP_008438078.1	1.53e-131	92.15	PREDICTED: LIM domain-containing protein PLIM2c-like [Cucumis melo]	[more]
XP_011650764.2	1.30e-130	91.62	LIM domain-containing protein PLIM2b isoform X2 [Cucumis sativus]	[more]
XP_022980412.1	1.30e-130	91.67	LIM domain-containing protein PLIM2c-like [Cucurbita maxima]	[more]

BLAST of MC05g0333 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1C3	8.89e-153	100.00	LIM domain-containing protein PLIM2c-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1D1H7	7.27e-143	92.72	LIM domain-containing protein PLIM2c-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A1S3AW36	7.40e-132	92.15	LIM domain-containing protein PLIM2c-like OS=Cucumis melo OX=3656 GN=LOC10348329...	[more]
A0A6J1IRA7	6.30e-131	91.67	LIM domain-containing protein PLIM2c-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1E9B9	3.64e-130	91.15	LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of MC05g0333 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61230.1	3.0e-84	72.55	GATA type zinc finger transcription factor family protein	[more]
AT1G01780.1	1.7e-82	69.86	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.1	4.8e-82	69.86	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	1.0e-71	64.67	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	2.9e-71	63.93	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 9..61 e-value: 1.8E-12 score: 57.5 coord: 105..157 e-value: 9.3E-13 score: 58.4
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 106..161 e-value: 8.3E-11 score: 42.0 coord: 10..65 e-value: 4.4E-13 score: 49.2
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 104..164 score: 12.0484
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.3948
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 100..170 e-value: 6.2E-18 score: 66.7 coord: 6..74 e-value: 5.7E-19 score: 70.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..206
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..204
None	No IPR available	PANTHER	PTHR24206:SF69	LIM DOMAIN-CONTAINING PROTEIN PLIM2C	coord: 1..204
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 6..68 e-value: 3.11533E-38 score: 124.885
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 98..131
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 3..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 132..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0333.1	MC05g0333.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding