MC05g0266 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0266
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	B3 domain-containing protein Os04g0386900-like
Location	MC05: 1950743 .. 1953635 (+)
RNA-Seq Expression	MC05g0266
Synteny	MC05g0266

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGAATGTCCCGGATCAGAGTTCCATCTTGGTCGATATCCTTAGAGGTATATTTTTTACTTCTCATCGTTGATAATTCAGTAATATATTTTTTTAAGTTTATAGGTTAAAGTATTAAATTTGTAATTTACCCTAATATAATTTAGATTTAGATATATATATATATAGAAGAAGTAAATTTTTAATTAATATTTTTTAATTCAACTAATTAAGAGATATATTAAAACCTAAACACTAAAAAAAATTAATTACTAACACGAGCTCAGTTGACGAGTAGTAATACCACCTATTCGTTGTACTTGAAAAAAAGCCCCCACTCTAATTCTACTTGGAAAACGAAAAGAAAAAGAAGTAGTTAATTATAATTTAATTGTCTTGTCAGACAAAAATGTTAAAATGGGGCATAATTTTATTATGTTCATCTCGCAAAAATAAATGAAGCGCAAGCGGAGCGGGTACGATAAAAAAAGCCCTCCAACTCTCTGCTTGCTCCGATCCGAGCCCTCACAGTCGCAGGTTAGTCAACTAATTTTTCCATTCGATTCCGTTTCCCTTTTCGTTTCGTCAATTCCCCACATTTTGTTTTGATTCCTACAAAACTCTCGTTTATTCTTTATCTTCAACGATTTTGTTCCCAAAAAAACGAATTTCTAGAGGAAACGAACCATAAAAAACCAAGTGATTCGCTTCTGAAGGTAAATGTTGGTTGTATCGTGTCTTCTAATGCGATTAGTTCATTTATCAGTGCGTTTATTCTGTTAGCTTTTATCATCTGCAGGTTTTTTCATCAATTCCCCTCTCTCAGTAGTTACATTTGGTTCTACACTGGTTTTTGTGAGTAATTTGCACTGGAAAAAGATAACCAGATGCAGTCACAAGAGAAACCTCCGTCAGAGCATACAACAATGGAGCCGCGAAATTATGAAATTTTTCCACTCTCAGACAAACCGTTCCATGGTGTTATTCTTGCAAAATCGCATGTCGCTCCCATTTATAATATGGTAAGTTCTCTAGAAATTACTCAGAAATATAAGAACAACTAGGGTTATGAACTAAATTGGATTCTGAGTGACTGTATTCCAAAACCCCCCAAAATTTATGGCTTAATCTGCAAAATATCTGGCTAGTTTATAGTTTTGGTCTCCCTTTTGTTATTATTATTTCGTAAAGCAACATTTGAAGAGAAACTTGCAAGATTAGCTAGTCTGGAAACTATTATAAAAACAGTTCAGAACAAAAATTTTGTATAATCGATTCAGGTAACTACTTTAATGGTTGGTCTTTTAGTATTTTGACAAATGATTTGTTAATCATAGATTTAGACAATTAGTTTCGAAAATGAAAACAGGAAATCGTCTTCAGAAGAGCCATGACTCTCCTGTTCAGAATCATGATTATGACTTGACAGTTGACTGTACCCAGTTCTTAACTAATGCCAAATGTTCAAATTATGCATTTTTTAGGCAAACAAATATATTGGTTTAATAGTGAAGAATGAAATATTTTCATTTGTAGACTTTGCCAGCCAAATTTCATTCTGTTTTACCTGCTATTGTGATCCATGGGGTTCTTTACTGTGGGGGCAAGGAATGGACAGTAGATTACTATGGAAACCGACGCGGTAAGTCACTTGATACGAGACATTGGAGGAAGTTTGTGAATGATAATCATCTAAAGTCTGGAGATGCTTGTGTATTTGAGCTCATGGAATGTAGCAGCAGCACACTCAAATTCAGAGTTCAAATTCTCAGAGGTGACATCCCTGTCCAGCTGCACGACAAGTTCAGCGGGGAGAGTAAAGACACCCCTATAAAAATTGACTAGCTGCCCCTTATTTCTATGGCTTGTGAACACGATATATATGCTTTTGGAATCAGGTAACCCGTTTGATCTCAGTAAGTGGATATGTAATCCTGTTTTTATGATATATGTTTCATGGATATTTCAATTTATACTTCATTCTCTTTGCATTTGGACTAGAGGGAACCATCAATACACGTTTTAGGAAGTAGGGGAAAGCAAAACCATTCAAAGTAATTTTCATTGCATAAGCATGACTGCTGAAAAGATTAAATGTTAAGACGAGCATCAAATTTGATTGTATTCTCGAGTTTTATAAGTATGGATGTTGTTGGTGTAAGGATTCCATTATTATATCTGATTGTTGTCTACTAGATTACTTTATCTTTCATAATCCTTACATATGTGTGCTTCACATATGCATGTTCGTTTTGAATCTCTTGATTATCCTTCTTTACACACAAGAGCACATCTTCTATGATCCAACGGAGTCAAAGATATCATTTTAGAAATTTGCATGGAACACGATCAATTTTCCAAAGCAAACATAGGTGTGTGAATTTCAAGATGTTCTTCAAACCATGTAACATTTATGTTAAGTGAGCCCGCTTAGCTCAACCCTAGACACTTTAAGTTCCTTTTTTCAAAACCAAGAAGTGAGTTATTTATCTGCCAAACATTCTTCTTATGGCTAGATCGAGTCTGGTCACTACAACTGAAACCCCCTTTGTGAGGAGGCACCCTTTCTCTTGAAGTTACGGGGCTGGCTCAGTTTGCCGAATTAGAAGCCGTTGCACAATTCGAAGGCATCTTTAAATACTCAAAGTTTCATATCAGAAGCAATTTTTCAAGAAACTACTCGAGTTTTAGCAAAAGCCGCCCTCTAAGGATAGACGTAACGCTTTAGCCAGTATACGGAAGTGCATACCATGATTCTTCTGTCAATCAACAACGACATGTCAAACTGATTTGATATAGCTTCTCAAAGAGCCTCACATTGGTGTTCTCTCTCCCATTCATTCTTGGGTTACAATTCAATAGATATTTGCTTGAATTGGAAAACTTTTATTTTTTCTGATTAGTTAGTGTTTTCT

mRNA sequence

ACGAATGTCCCGGATCAGAGTTCCATCTTGGTCGATATCCTTAGAGCGCAAGCGGAGCGGGTACGATAAAAAAAGCCCTCCAACTCTCTGCTTGCTCCGATCCGAGCCCTCACAGTCGCAGGTTTTTTCATCAATTCCCCTCTCTCAGTAGTTACATTTGGTTCTACACTGGTTTTTGTGAGTAATTTGCACTGGAAAAAGATAACCAGATGCAGTCACAAGAGAAACCTCCGTCAGAGCATACAACAATGGAGCCGCGAAATTATGAAATTTTTCCACTCTCAGACAAACCGTTCCATGGTGTTATTCTTGCAAAATCGCATGTCGCTCCCATTTATAATATGACTTTGCCAGCCAAATTTCATTCTGTTTTACCTGCTATTGTGATCCATGGGGTTCTTTACTGTGGGGGCAAGGAATGGACAGTAGATTACTATGGAAACCGACGCGGTAAGTCACTTGATACGAGACATTGGAGGAAGTTTGTGAATGATAATCATCTAAAGTCTGGAGATGCTTGTGTATTTGAGCTCATGGAATGTAGCAGCAGCACACTCAAATTCAGAGTTCAAATTCTCAGAGGTGACATCCCTGTCCAGCTGCACGACAAGTTCAGCGGGGAGAGTAAAGACACCCCTATAAAAATTGACTAGCTGCCCCTTATTTCTATGGCTTGTGAACACGATATATATGCTTTTGGAATCAGATCGAGTCTGGTCACTACAACTGAAACCCCCTTTGTGAGGAGGCACCCTTTCTCTTGAAGTTACGGGGCTGGCTCAGTTTGCCGAATTAGAAGCCGTTGCACAATTCGAAGGCATCTTTAAATACTCAAAGTTTCATATCAGAAGCAATTTTTCAAGAAACTACTCGAGTTTTAGCAAAAGCCGCCCTCTAAGGATAGACGTAACGCTTTAGCCAGTATACGGAAGTGCATACCATGATTCTTCTGTCAATCAACAACGACATGTCAAACTGATTTGATATAGCTTCTCAAAGAGCCTCACATTGGTGTTCTCTCTCCCATTCATTCTTGGGTTACAATTCAATAGATATTTGCTTGAATTGGAAAACTTTTATTTTTTCTGATTAGTTAGTGTTTTCT

Coding sequence (CDS)

ATGCAGTCACAAGAGAAACCTCCGTCAGAGCATACAACAATGGAGCCGCGAAATTATGAAATTTTTCCACTCTCAGACAAACCGTTCCATGGTGTTATTCTTGCAAAATCGCATGTCGCTCCCATTTATAATATGACTTTGCCAGCCAAATTTCATTCTGTTTTACCTGCTATTGTGATCCATGGGGTTCTTTACTGTGGGGGCAAGGAATGGACAGTAGATTACTATGGAAACCGACGCGGTAAGTCACTTGATACGAGACATTGGAGGAAGTTTGTGAATGATAATCATCTAAAGTCTGGAGATGCTTGTGTATTTGAGCTCATGGAATGTAGCAGCAGCACACTCAAATTCAGAGTTCAAATTCTCAGAGGTGACATCCCTGTCCAGCTGCACGACAAGTTCAGCGGGGAGAGTAAAGACACCCCTATAAAAATTGACTAG

Protein sequence

MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVIHGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRVQILRGDIPVQLHDKFSGESKDTPIKID

Homology

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BLAST of MC05g0266 vs. ExPASy Swiss-Prot
Match: Q7XLP4 (B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0386900 PE=2 SV=3)

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-17
Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = 0


Query: 8   PSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVIHGVLYCG 67
           P E    +   + + PL  KP+   I+ KSHV P + + +P  F  +LP+      L   
Sbjct: 71  PPEPEPEKVARHGVLPLLGKPYFTCIMCKSHVQPPFQVVVPRSFAPLLPSRTTPATLSWR 130

Query: 68  GKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELM---ECSSSTLKFRVQILR 127
           G+ W + + G R  + L+   WR F  DN L+ GD CVFEL+         ++FRVQ+LR
Sbjct: 131 GRSWGMRFTGGRLIQRLEA-GWRGFAVDNDLRLGDGCVFELLVGGGGEQERVEFRVQVLR 190

Query: 128 GDIPVQLHDKFSGESKDTPIKID 148
            +IP ++  +  G +  TPI ID
Sbjct: 191 AEIPARIRGRAGGYTSATPIVID 212

[Close]

BLAST of MC05g0266 vs. ExPASy Swiss-Prot
Match: Q9LHY9 (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0112300 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-16
Identity = 50/122 (40.98%), Postives = 69/122 (56.56%), Query Frame = 0


Query: 28  PFHGVILAKSHVAPIYNMTLPAKFHSVL--PAIVIHGVLYCGGKEWTVDYYGNRRGKSLD 87
           PF   ++AKSH+ P + M +P +F   L  P      VL+ GGK W   Y G+ + K LD
Sbjct: 54  PFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVLHSGGKSWATSYCGHLKMKKLD 113

Query: 88  TRHWRKFVNDNHLKSGDACVFELMEC-SSSTLKFRVQILRGDIPVQLHDKFSGESKDTPI 147
              W +F  DN L  GDACVFEL+   ++  L+F+VQILRG +P ++     G + D PI
Sbjct: 114 A-GWSEFAVDNRLLVGDACVFELVAMGAAGGLEFQVQILRGGLPAEVVTS-KGLTSDQPI 173

[Close]

BLAST of MC05g0266 vs. ExPASy Swiss-Prot
Match: Q8RYD1 (B3 domain-containing protein REM16 OS=Arabidopsis thaliana OX=3702 GN=REM16 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.3e-05
Identity = 31/99 (31.31%), Postives = 49/99 (49.49%), Query Frame = 0


Query: 32  VILAKSHVAPIYNMTLPAKFHSVLPAIVIHG--VLYCGGKEWTVDY--YGNRRGKSLDTR 91
           V + +SHV     +T+P K+  V   ++     V+     +W + +  +G R    + T 
Sbjct: 225 VFMKRSHVVSKCFLTIPYKW-CVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSGGIST- 284

Query: 92  HWRKFVNDNHLKSGDACVFELMECSSSTLKFRVQILRGD 127
            W+KFV DN+L+ GD CVFE     +  L   V I RG+
Sbjct: 285 GWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRGE 321

[Close]

BLAST of MC05g0266 vs. ExPASy Swiss-Prot
Match: Q6AV21 (B3 domain-containing protein Os03g0619800 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0619800 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 9.7e-05
Identity = 33/96 (34.38%), Postives = 45/96 (46.88%), Query Frame = 0


Query: 29  FHGVILAKSHVAPIYNMTLPAKFHSVLPAIVIHGVLYCGGKEWTVDYYGNRR---GKS-L 88
           F G+ L+  + A      LP K H  L       VL C G  W ++    RR   GK   
Sbjct: 441 FRGLELSSRYAASY----LPDKNHQTL-------VLQCKGMIWQINLVVRRRYTKGKRWF 500

Query: 89  DTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 121
            T  WRKF +DN L+ GD C+FEL +    T++  +
Sbjct: 501 LTAGWRKFAHDNRLRVGDFCLFELKKKKKLTMEVHI 525

[Close]

BLAST of MC05g0266 vs. NCBI nr
Match: XP_022147119.1 (B3 domain-containing protein Os04g0386900-like [Momordica charantia])

HSP 1 Score: 311 bits (798), Expect = 2.73e-107
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60
           MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI
Sbjct: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60

Query: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120
           HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV
Sbjct: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120

Query: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147
           QILRGDIPVQLHDKFSGESKDTPIKID
Sbjct: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147

[Close]

BLAST of MC05g0266 vs. NCBI nr
Match: XP_022146910.1 (B3 domain-containing protein Os04g0386900-like [Momordica charantia] >XP_022146911.1 B3 domain-containing protein Os04g0386900-like [Momordica charantia])

HSP 1 Score: 262 bits (669), Expect = 1.29e-87
Identity = 124/147 (84.35%), Postives = 133/147 (90.48%), Query Frame = 0


Query: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60
           MQSQEKPPSE   MEPR  EIFPLS+KPFHGVIL KSHVAP Y M+LPAKFHSVLPAIVI
Sbjct: 1   MQSQEKPPSEPAEMEPRIDEIFPLSNKPFHGVILGKSHVAPAYLMSLPAKFHSVLPAIVI 60

Query: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120
           HGV+YCGGKEW VDYYGNRRG++LDTR WRKFV++NHLK GDACVFELMECSSS +KFRV
Sbjct: 61  HGVVYCGGKEWRVDYYGNRRGRTLDTRGWRKFVDENHLKYGDACVFELMECSSSMVKFRV 120

Query: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147
           QILRGDIPVQLHDKF GES+DTPI ID
Sbjct: 121 QILRGDIPVQLHDKFRGESRDTPINID 147

[Close]

BLAST of MC05g0266 vs. NCBI nr
Match: XP_022974195.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974196.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974197.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975683.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975684.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975685.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima])

HSP 1 Score: 247 bits (630), Expect = 1.14e-81
Identity = 115/147 (78.23%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60
           MQSQEKPP+E T M+P+N  I PLS KP+HGVIL+KSHVAPI NM LPAKFHSVLPAI+I
Sbjct: 1   MQSQEKPPTEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120
             VLYC GK+W +DYYGNRRGK+LDT+ WRKFVNDNHLK GDACVFEL+ECSSS LKFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVLKFRV 120

Query: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147
           QILRGDIP +LH+KFSGES++TPI ID
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]

BLAST of MC05g0266 vs. NCBI nr
Match: XP_022941967.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita moschata] >XP_022941973.1 B3 domain-containing protein Os04g0386900-like [Cucurbita moschata])

HSP 1 Score: 245 bits (626), Expect = 4.63e-81
Identity = 114/147 (77.55%), Postives = 129/147 (87.76%), Query Frame = 0


Query: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60
           MQSQEKPP E T M+P+N  I PLS KP+HGVIL+KSHVAPI NM LPAKFHSVLPAI+I
Sbjct: 1   MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120
             VLYC GK+W +DYYGNRRGK+LDT+ WRKFVNDNHLK GDACVFEL+ECSSS +KFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120

Query: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147
           QILRGDIP +LH+KFSGES++TPI ID
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]

BLAST of MC05g0266 vs. NCBI nr
Match: XP_023539026.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo] >KAG6597214.1 B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028685.1 B3 domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245 bits (626), Expect = 4.63e-81
Identity = 113/147 (76.87%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60
           MQSQEKPP+E T M+P+N  I PLS KP+HGVIL+KSHVAPI NM +PAKFHSVLPAI+I
Sbjct: 1   MQSQEKPPTEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFMPAKFHSVLPAIMI 60

Query: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120
             VLYC GK+W +DYYGNRRGK+LDT+ WRKFVNDNHLK GDACVFEL+ECSSS +KFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120

Query: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147
           QILRGDIP +LH+KFSGES++TPI ID
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]

BLAST of MC05g0266 vs. ExPASy TrEMBL
Match: A0A6J1D033 (B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN=LOC111016130 PE=4 SV=1)

HSP 1 Score: 311 bits (798), Expect = 1.32e-107
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60
           MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI
Sbjct: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60

Query: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120
           HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV
Sbjct: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120

Query: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147
           QILRGDIPVQLHDKFSGESKDTPIKID
Sbjct: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147

[Close]

BLAST of MC05g0266 vs. ExPASy TrEMBL
Match: A0A6J1CYN6 (B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN=LOC111015996 PE=4 SV=1)

HSP 1 Score: 262 bits (669), Expect = 6.25e-88
Identity = 124/147 (84.35%), Postives = 133/147 (90.48%), Query Frame = 0


Query: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60
           MQSQEKPPSE   MEPR  EIFPLS+KPFHGVIL KSHVAP Y M+LPAKFHSVLPAIVI
Sbjct: 1   MQSQEKPPSEPAEMEPRIDEIFPLSNKPFHGVILGKSHVAPAYLMSLPAKFHSVLPAIVI 60

Query: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120
           HGV+YCGGKEW VDYYGNRRG++LDTR WRKFV++NHLK GDACVFELMECSSS +KFRV
Sbjct: 61  HGVVYCGGKEWRVDYYGNRRGRTLDTRGWRKFVDENHLKYGDACVFELMECSSSMVKFRV 120

Query: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147
           QILRGDIPVQLHDKF GES+DTPI ID
Sbjct: 121 QILRGDIPVQLHDKFRGESRDTPINID 147

[Close]

BLAST of MC05g0266 vs. ExPASy TrEMBL
Match: A0A6J1IDC2 (B3 domain-containing protein Os04g0386900-like OS=Cucurbita maxima OX=3661 GN=LOC111472772 PE=4 SV=1)

HSP 1 Score: 247 bits (630), Expect = 5.51e-82
Identity = 115/147 (78.23%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60
           MQSQEKPP+E T M+P+N  I PLS KP+HGVIL+KSHVAPI NM LPAKFHSVLPAI+I
Sbjct: 1   MQSQEKPPTEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120
             VLYC GK+W +DYYGNRRGK+LDT+ WRKFVNDNHLK GDACVFEL+ECSSS LKFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVLKFRV 120

Query: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147
           QILRGDIP +LH+KFSGES++TPI ID
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]

BLAST of MC05g0266 vs. ExPASy TrEMBL
Match: A0A6J1FTK2 (B3 domain-containing protein Os04g0386900-like OS=Cucurbita moschata OX=3662 GN=LOC111447171 PE=4 SV=1)

HSP 1 Score: 245 bits (626), Expect = 2.24e-81
Identity = 114/147 (77.55%), Postives = 129/147 (87.76%), Query Frame = 0


Query: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60
           MQSQEKPP E T M+P+N  I PLS KP+HGVIL+KSHVAPI NM LPAKFHSVLPAI+I
Sbjct: 1   MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120
             VLYC GK+W +DYYGNRRGK+LDT+ WRKFVNDNHLK GDACVFEL+ECSSS +KFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120

Query: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147
           QILRGDIP +LH+KFSGES++TPI ID
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]

BLAST of MC05g0266 vs. ExPASy TrEMBL
Match: A0A0A0L3V3 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 SV=1)

HSP 1 Score: 230 bits (586), Expect = 2.80e-75
Identity = 107/147 (72.79%), Postives = 125/147 (85.03%), Query Frame = 0


Query: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60
           MQS  KPP+E  TMEP+N E  PLS KP+H  IL+KSHVAPIYN+ LPAKFHS+LPAIVI
Sbjct: 1   MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60

Query: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120
             VL C GK+W +DY+GNRRGK+LD++ WRKFVNDN LKSGDA VFEL+ECSSS LKFRV
Sbjct: 61  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRV 120

Query: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147
           QIL GDIP++LHDKFSGE+K+TPI +D
Sbjct: 121 QILSGDIPLELHDKFSGETKETPIHLD 147

[Close]

BLAST of MC05g0266 vs. TAIR 10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 49.7 bits (117), Expect = 2.4e-06
Identity = 31/99 (31.31%), Postives = 49/99 (49.49%), Query Frame = 0


Query: 32  VILAKSHVAPIYNMTLPAKFHSVLPAIVIHG--VLYCGGKEWTVDY--YGNRRGKSLDTR 91
           V + +SHV     +T+P K+  V   ++     V+     +W + +  +G R    + T 
Sbjct: 225 VFMKRSHVVSKCFLTIPYKW-CVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSGGIST- 284

Query: 92  HWRKFVNDNHLKSGDACVFELMECSSSTLKFRVQILRGD 127
            W+KFV DN+L+ GD CVFE     +  L   V I RG+
Sbjct: 285 GWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRGE 321

[Close]

BLAST of MC05g0266 vs. TAIR 10
Match: AT1G49480.1 (related to vernalization1 1 )

HSP 1 Score: 41.2 bits (95), Expect = 8.4e-04
Identity = 35/123 (28.46%), Postives = 56/123 (45.53%), Query Frame = 0


Query: 2   QSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKF-HSVLPAIVI 61
           + +E+  +   T EP N         P+  V+L  S++     M LP+ F    L  I  
Sbjct: 110 EERERAVNAAKTFEPTN---------PYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISG 169

Query: 62  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLK--- 121
              L  G K+W V     + G++  ++ W +F  +N++  GD CVFEL+      L+   
Sbjct: 170 FIKLQLGEKQWPVRCL-YKAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTA 222

The following BLAST results are available for this feature:

BLAST of MC05g0266 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XLP4	1.0e-17	34.27	B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9LHY9	1.4e-16	40.98	B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q8RYD1	3.3e-05	31.31	B3 domain-containing protein REM16 OS=Arabidopsis thaliana OX=3702 GN=REM16 PE=2...	[more]
Q6AV21	9.7e-05	34.38	B3 domain-containing protein Os03g0619800 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of MC05g0266 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147119.1	2.73e-107	100.00	B3 domain-containing protein Os04g0386900-like [Momordica charantia]	[more]
XP_022146910.1	1.29e-87	84.35	B3 domain-containing protein Os04g0386900-like [Momordica charantia] >XP_0221469...	[more]
XP_022974195.1	1.14e-81	78.23	B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974196....	[more]
XP_022941967.1	4.63e-81	77.55	B3 domain-containing protein Os04g0386900-like [Cucurbita moschata] >XP_02294197...	[more]
XP_023539026.1	4.63e-81	76.87	B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo] >KAG...	[more]

BLAST of MC05g0266 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D033	1.32e-107	100.00	B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1CYN6	6.25e-88	84.35	B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1IDC2	5.51e-82	78.23	B3 domain-containing protein Os04g0386900-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FTK2	2.24e-81	77.55	B3 domain-containing protein Os04g0386900-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A0A0L3V3	2.80e-75	72.79	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 ...	[more]

BLAST of MC05g0266 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33280.1	2.4e-06	31.31	AP2/B3-like transcriptional factor family protein	[more]
AT1G49480.1	8.4e-04	28.46	related to vernalization1 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 34..126 e-value: 0.0025 score: 25.0
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 65..124 e-value: 3.9E-12 score: 45.9
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 68..126 score: 11.307232
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 33..124 e-value: 7.96586E-15 score: 63.8861
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 9..126 e-value: 9.6E-19 score: 69.3
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 26..124
None	No IPR available	PANTHER	PTHR31391:SF64	B3 DOMAIN-CONTAINING PROTEIN OS04G0386900	coord: 4..139
IPR044837	B3 domain-containing protein REM16-like	PANTHER	PTHR31391	B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED	coord: 4..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0266.1	MC05g0266.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding