MC05g0250 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0250
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Protein phosphatase 2C 29-like
Location	MC05: 1815165 .. 1815434 (+)
RNA-Seq Expression	MC05g0250
Synteny	MC05g0250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAACAAAACAGAGTGTCATTATATGGATATAACAGCACCTGGAAGGAATGAACCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACTCACAACCAGAATCAGCTCTTTCTTCCAAGCGATCGTCTGGAAAGCTTAGTAGTGAGAACCTCAATCTGGTAAACAACGGGGTAGGCCACAATCTGGTGGAAGGGAAAGAATCCGATGTAGAGAAATATAGATCTGAGCTGATCTCTATTTCCTTCCTTGAATCACCACCTGAC

mRNA sequence

GAAAACAAAACAGAGTGTCATTATATGGATATAACAGCACCTGGAAGGAATGAACCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACTCACAACCAGAATCAGCTCTTTCTTCCAAGCGATCGTCTGGAAAGCTTAGTAGTGAGAACCTCAATCTGGTAAACAACGGGGTAGGCCACAATCTGGTGGAAGGGAAAGAATCCGATGTAGAGAAATATAGATCTGAGCTGATCTCTATTTCCTTCCTTGAATCACCACCTGAC

Coding sequence (CDS)

GAAAACAAAACAGAGTGTCATTATATGGATATAACAGCACCTGGAAGGAATGAACCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACTCACAACCAGAATCAGCTCTTTCTTCCAAGCGATCGTCTGGAAAGCTTAGTAGTGAGAACCTCAATCTGGTAAACAACGGGGTAGGCCACAATCTGGTGGAAGGGAAAGAATCCGATGTAGAGAAATATAGATCTGAGCTGATCTCTATTTCCTTCCTTGAATCACCACCTGAC

Protein sequence

ENKTECHYMDITAPGRNEPEEVTRESLIAISYSQPESALSSKRSSGKLSSENLNLVNNGVGHNLVEGKESDVEKYRSELISISFLESPPD

Homology

[Close]

BLAST of MC05g0250 vs. NCBI nr
Match: KAG6582528.1 (hypothetical protein SDJN03_22530, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 130 bits (327), Expect = 2.05e-36
Identity = 69/82 (84.15%), Postives = 75/82 (91.46%), Query Frame = 0


Query: 9  MDITAPGRNEPEEVTRESLIAISYSQPESALSSKRSSGKLSSENLNLVNNGVGHNLVEGK 68
          MDIT PG N+PEEVTRESLIAISY +PE+ LSSKRSSGKLSSENLNLVN G+ HNLVEGK
Sbjct: 1  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVN-GIDHNLVEGK 60

Query: 69 ESDVEKYRSELISISFLESPPD 90
          E DVEKYRSELI+ISFLESPP+
Sbjct: 61 EYDVEKYRSELIAISFLESPPE 81

[Close]

BLAST of MC05g0250 vs. NCBI nr
Match: KAG7018913.1 (hypothetical protein SDJN02_20787, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 130 bits (327), Expect = 5.76e-36
Identity = 69/82 (84.15%), Postives = 75/82 (91.46%), Query Frame = 0


Query: 9  MDITAPGRNEPEEVTRESLIAISYSQPESALSSKRSSGKLSSENLNLVNNGVGHNLVEGK 68
          MDIT PG N+PEEVTRESLIAISY +PE+ LSSKRSSGKLSSENLNLVN G+ HNLVEGK
Sbjct: 1  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVN-GIDHNLVEGK 60

Query: 69 ESDVEKYRSELISISFLESPPD 90
          E DVEKYRSELI+ISFLESPP+
Sbjct: 61 EYDVEKYRSELIAISFLESPPE 81

[Close]

BLAST of MC05g0250 vs. NCBI nr
Match: XP_022963288.1 (uncharacterized protein LOC111463263 [Cucurbita moschata])

HSP 1 Score: 119 bits (299), Expect = 9.24e-33
Identity = 67/89 (75.28%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 3  KTECHYMDITAPGRNEPEEVTRESLIAISYSQPESALSSKRSSGKLSSENLNLVNNGVGH 62
          +TECHYMDIT PG+N  EEVTRESLIAISYS+PESALSSKR SGKL+S+NLNLV      
Sbjct: 19 QTECHYMDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLV------ 78

Query: 63 NLVEGKESDV-EKYRSELISISFLESPPD 90
             EGKE D  EKYRSELISISFLESPP+
Sbjct: 79 ---EGKEFDADEKYRSELISISFLESPPE 98

[Close]

BLAST of MC05g0250 vs. NCBI nr
Match: XP_022974968.1 (uncharacterized protein LOC111473815 [Cucurbita maxima])

HSP 1 Score: 118 bits (296), Expect = 2.64e-32
Identity = 66/89 (74.16%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 3  KTECHYMDITAPGRNEPEEVTRESLIAISYSQPESALSSKRSSGKLSSENLNLVNNGVGH 62
          +TECHYMDIT PG+N  EEVTRESLIAISYS+PESALSSKR SGKL+S+NLNLV      
Sbjct: 19 QTECHYMDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLV------ 78

Query: 63 NLVEGKESDV-EKYRSELISISFLESPPD 90
             EGKE D  EKYRSELI+ISFLESPP+
Sbjct: 79 ---EGKEFDADEKYRSELIAISFLESPPE 98

[Close]

BLAST of MC05g0250 vs. NCBI nr
Match: KAA0049081.1 (hypothetical protein E6C27_scaffold171G003100 [Cucumis melo var. makuwa] >TYK17482.1 hypothetical protein E5676_scaffold434G003470 [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (270), Expect = 1.35e-28
Identity = 61/83 (73.49%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 9  MDITAPGRNEPEEVTRESLIAISYSQPESALSSKRSSGKLSSENLNLVNNGVGHNLVEGK 68
          MDIT PGRN PEEVTRESLI+ISY +PE+ LSSKR S KLSSEN+NL N G+ HN VEGK
Sbjct: 1  MDITVPGRNAPEEVTRESLISISYEEPETILSSKRPSEKLSSENINLAN-GINHNQVEGK 60

Query: 69 ESDV-EKYRSELISISFLESPPD 90
          E D  EK+RSELI+ISFLES P+
Sbjct: 61 EYDGDEKFRSELIAISFLESLPE 82

[Close]

BLAST of MC05g0250 vs. ExPASy TrEMBL
Match: A0A6J1HHB9 (uncharacterized protein LOC111463263 OS=Cucurbita moschata OX=3662 GN=LOC111463263 PE=4 SV=1)

HSP 1 Score: 119 bits (299), Expect = 4.47e-33
Identity = 67/89 (75.28%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 3  KTECHYMDITAPGRNEPEEVTRESLIAISYSQPESALSSKRSSGKLSSENLNLVNNGVGH 62
          +TECHYMDIT PG+N  EEVTRESLIAISYS+PESALSSKR SGKL+S+NLNLV      
Sbjct: 19 QTECHYMDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLV------ 78

Query: 63 NLVEGKESDV-EKYRSELISISFLESPPD 90
             EGKE D  EKYRSELISISFLESPP+
Sbjct: 79 ---EGKEFDADEKYRSELISISFLESPPE 98

[Close]

BLAST of MC05g0250 vs. ExPASy TrEMBL
Match: A0A6J1IHW2 (uncharacterized protein LOC111473815 OS=Cucurbita maxima OX=3661 GN=LOC111473815 PE=4 SV=1)

HSP 1 Score: 118 bits (296), Expect = 1.28e-32
Identity = 66/89 (74.16%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 3  KTECHYMDITAPGRNEPEEVTRESLIAISYSQPESALSSKRSSGKLSSENLNLVNNGVGH 62
          +TECHYMDIT PG+N  EEVTRESLIAISYS+PESALSSKR SGKL+S+NLNLV      
Sbjct: 19 QTECHYMDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLV------ 78

Query: 63 NLVEGKESDV-EKYRSELISISFLESPPD 90
             EGKE D  EKYRSELI+ISFLESPP+
Sbjct: 79 ---EGKEFDADEKYRSELIAISFLESPPE 98

[Close]

BLAST of MC05g0250 vs. ExPASy TrEMBL
Match: A0A5A7U641 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003470 PE=4 SV=1)

HSP 1 Score: 108 bits (270), Expect = 6.52e-29
Identity = 61/83 (73.49%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 9  MDITAPGRNEPEEVTRESLIAISYSQPESALSSKRSSGKLSSENLNLVNNGVGHNLVEGK 68
          MDIT PGRN PEEVTRESLI+ISY +PE+ LSSKR S KLSSEN+NL N G+ HN VEGK
Sbjct: 1  MDITVPGRNAPEEVTRESLISISYEEPETILSSKRPSEKLSSENINLAN-GINHNQVEGK 60

Query: 69 ESDV-EKYRSELISISFLESPPD 90
          E D  EK+RSELI+ISFLES P+
Sbjct: 61 EYDGDEKFRSELIAISFLESLPE 82

[Close]

BLAST of MC05g0250 vs. ExPASy TrEMBL
Match: A0A0A0L967 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127140 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.32e-25
Identity = 55/83 (66.27%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 9  MDITAPGRNEPEEVTRESLIAISYSQPESALSSKRSSGKLSSENLNLVNNGVGHNLVEGK 68
          MD T PGRN PEEVTRESLI+ISY +PE+ LSS + S K+S EN+NL N G+ HN +EGK
Sbjct: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLAN-GINHNQMEGK 60

Query: 69 ESDV-EKYRSELISISFLESPPD 90
          E D  EK+RSELI+ISFLES P+
Sbjct: 61 EYDGDEKFRSELIAISFLESLPE 82

[Close]

BLAST of MC05g0250 vs. ExPASy TrEMBL
Match: W9RTT6 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023870 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.70e-14
Identity = 46/81 (56.79%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 9  MDITAPGRNEPEEVTRESLIAISYSQPESALSSKRSSGKLSSENLNLVNNGVGHNLVEGK 68
          MD TAP +  PEEVTRESLI+ISYS PE+ L+SK SS KL+           G NLV G 
Sbjct: 1  MDKTAPEKEVPEEVTRESLISISYSLPENVLTSKPSSDKLN-----------GENLVGGI 60

Query: 69 ESDVE-KYRSELISISFLESP 88
          + D E K+RSELISIS+ +SP
Sbjct: 61 DCDGEDKFRSELISISYTQSP 70

The following BLAST results are available for this feature:

BLAST of MC05g0250 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g0250 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6582528.1	2.05e-36	84.15	hypothetical protein SDJN03_22530, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7018913.1	5.76e-36	84.15	hypothetical protein SDJN02_20787, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022963288.1	9.24e-33	75.28	uncharacterized protein LOC111463263 [Cucurbita moschata]	[more]
XP_022974968.1	2.64e-32	74.16	uncharacterized protein LOC111473815 [Cucurbita maxima]	[more]
KAA0049081.1	1.35e-28	73.49	hypothetical protein E6C27_scaffold171G003100 [Cucumis melo var. makuwa] >TYK174...	[more]

BLAST of MC05g0250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHB9	4.47e-33	75.28	uncharacterized protein LOC111463263 OS=Cucurbita moschata OX=3662 GN=LOC1114632...	[more]
A0A6J1IHW2	1.28e-32	74.16	uncharacterized protein LOC111473815 OS=Cucurbita maxima OX=3661 GN=LOC111473815...	[more]
A0A5A7U641	6.52e-29	73.49	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L967	2.32e-25	66.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127140 PE=4 SV=1	[more]
W9RTT6	4.70e-14	56.79	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023870 PE=4 SV=1	[more]

BLAST of MC05g0250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..54
None	No IPR available	PANTHER	PTHR35282:SF2	F5D14.24 PROTEIN	coord: 3..88
None	No IPR available	PANTHER	PTHR35282	F5D14.24 PROTEIN	coord: 3..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0250.1	MC05g0250.1	mRNA